RNA–Protein interactions for RNA: ENSMUST00000031971.12

Ssbp1-201, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

TSL 1 (best) BASIC

Gene Ssbp1, Length 1,063 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-201ENSMUST00000031971 Gm4553A0A1B0GSA9 284 aa4.53□□□□□ -1.68
Ssbp1-201ENSMUST00000031971 Gm20604F8WIA3 75 aa4.53□□□□□ -1.68
Ssbp1-201ENSMUST00000031971 Ccdc179J3QM76 67 aa4.53□□□□□ -1.68
Ssbp1-201ENSMUST00000031971 Gm10767Q3TQP0 103 aa4.53□□□□□ -1.68
Ssbp1-201ENSMUST00000031971 Cops9Q3U898 57 aa4.53□□□□□ -1.68
Ssbp1-201ENSMUST00000031971 Wfdc13Q5DQQ6 81 aa4.53□□□□□ -1.68
Ssbp1-201ENSMUST00000031971 BC048502Q80Y74 154 aa4.53□□□□□ -1.68
Ssbp1-201ENSMUST00000031971 A930002H24RikQ8C8Y3 163 aa4.53□□□□□ -1.68
Ssbp1-201ENSMUST00000031971 D6Ertd527eA0A0N4SWI3 464 aa4.52□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Igkv1-122A0A140T8M9 119 aa4.52□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Defa28D3Z1V9 94 aa4.52□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Mtatp8P03930 67 aa4.52□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Rps28P62858 69 aaKnown RBP4.52□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 BtcQ05928 177 aa4.52□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Defb47Q30KN1 79 aa4.52□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Smim13E9Q942 88 aa4.51□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Gm10337F7DEP7 55 aa4.51□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 H2al1aQ5M8Q2 105 aa4.51□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Igkv1-35A0A0G2JDE5 120 aa4.5□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Rpl32-psP17932 135 aa4.5□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 CenpwQ3URR0 86 aa4.5□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Spink13Q3UTS8 97 aa4.5□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Defa25Q5G864 92 aa4.5□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Vmn1r197Q8R265 298 aa4.5□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Rpl39lQ9CQD0 51 aa4.5□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Gm26602M0QWA4 95 aa4.49□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Phpt1Q9DAK9 124 aa4.49□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Atp5eP56382 52 aa4.48□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Q8K1L6 76 aa4.48□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Ighv10-1A0A0B4J1J6 119 aa4.47□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Igkv3-5A0A140T8M6 119 aa4.47□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 A0A286YE02 88 aa4.47□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Vpreb1P13372 142 aa4.47□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Smim26Q3V460 107 aa4.47□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Gm26920S4R2A5 56 aa4.47□□□□□ -1.69
Ssbp1-201ENSMUST00000031971 Gm29423A0A087WRM1 55 aa4.46□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Gm37389A0A0A6YW05 95 aa4.46□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Tmem243B2RVB9 118 aa4.46□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Vpreb3D3Z6J4 130 aa4.46□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Tac4Q99N14 128 aa4.46□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Lyrm7Q9DA03 104 aa4.46□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Dnal4Q9DCM4 105 aa4.46□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Igkv8-26A0A075B5N5 123 aa4.45□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Gm10135F6TEE5 83 aa4.45□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Igkv2-109A0A075B5K6 120 aa4.44□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 H2al1bA0A087WP11 105 aa4.44□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 H2al1kJ3QP08 105 aa4.44□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Cypt14J3QPF7 87 aa4.44□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 1700020N15RikL7MTX3 112 aa4.44□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Cox7cP17665 63 aa4.44□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 H2al1eQ810S6 105 aa4.44□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 H2al1mQ9DAD9 105 aa4.44□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Gm7579A0A1B0GRJ4 243 aa4.43□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Gm16381A0A1Y7VKT9 73 aa4.43□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Smr3aQ61900 147 aa4.43□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Defb12Q8K4N3 78 aa4.43□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 4930524J08RikQ9CUJ5 163 aa4.43□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Znf706Q9D115 76 aaKnown RBP4.42□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Gm28230A0A0A0MQ91 144 aa4.41□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Krtap5-1Q64507 230 aa4.41□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Gm10308Q9CVR5 141 aa4.41□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Ush2AQ2QI47 5193 aa4.41□□□□□ -1.7
Ssbp1-201ENSMUST00000031971 Q8BT88 171 aa4.4□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 1700018G05RikA0A1B0GSI2 66 aa4.39□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 P06320 134 aa4.39□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 Hint1P70349 126 aaKnown RBP4.39□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 Spaca4Q80ZQ0 127 aa4.39□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 Lamtor3O88653 124 aa4.38□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 A830005F24RikQ8BRT5 167 aa4.38□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 Gm10401E9Q3K6 71 aa4.37□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 9530003J23RikQ8BM26 151 aa4.37□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 Igkv3-10A0A0G2JGN0 119 aa4.36□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 A730071L15RikQ8C4X0 137 aa4.36□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 Ifitm6A0A1B0GS75 124 aa4.35□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 Gm19935A0A1B0GSF9 52 aa4.35□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 Gm7735D3YX18 52 aa4.35□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 Igkv8-27A0A0G2JF28 120 aa4.34□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 Igkv8-30A0A140T8M3 121 aa4.34□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 Gm2310J3QNJ2 377 aa4.34□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 Prm1P02319 51 aa4.34□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 Cox6a2P43023 97 aa4.34□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 Gm9789Q8BIG3 52 aa4.34□□□□□ -1.71
Ssbp1-201ENSMUST00000031971 Hmcn2A2AJ76 5100 aa4.34□□□□□ -1.72
Ssbp1-201ENSMUST00000031971 Ubr4A2AN08 5180 aa4.33□□□□□ -1.72
Ssbp1-201ENSMUST00000031971 Krtap5-2Q9D5Z7 189 aa4.33□□□□□ -1.72
Ssbp1-201ENSMUST00000031971 Igkv8-28A0A0G2JE47 121 aa4.32□□□□□ -1.72
Ssbp1-201ENSMUST00000031971 Gm17689B3GLJ4 109 aa4.32□□□□□ -1.72
Ssbp1-201ENSMUST00000031971 Gm7102J3QQ10 178 aa4.32□□□□□ -1.72
Ssbp1-201ENSMUST00000031971 Tmem258P61166 79 aa4.32□□□□□ -1.72
Ssbp1-201ENSMUST00000031971 NrepQ07475 68 aa4.32□□□□□ -1.72
Ssbp1-201ENSMUST00000031971 Apoc4Q61268 124 aa4.32□□□□□ -1.72
Ssbp1-201ENSMUST00000031971 Sox16Q62247 57 aa4.32□□□□□ -1.72
Ssbp1-201ENSMUST00000031971 Cox6cQ9CPQ1 76 aa4.32□□□□□ -1.72
Ssbp1-201ENSMUST00000031971 Gm16253D3Z167 63 aa4.31□□□□□ -1.72
Ssbp1-201ENSMUST00000031971 A930033H14RikG5E8X6 103 aa4.31□□□□□ -1.72
Ssbp1-201ENSMUST00000031971 4932415D10RikA0A1W2P6U8 4986 aa4.31□□□□□ -1.72
Ssbp1-201ENSMUST00000031971 Ighv10-3A0A075B5T6 119 aa4.3□□□□□ -1.72
Ssbp1-201ENSMUST00000031971 Acyp1P56376 99 aa4.29□□□□□ -1.72
Ssbp1-201ENSMUST00000031971 4930535I16RikQ9CUI2 172 aa4.29□□□□□ -1.72
Ssbp1-201ENSMUST00000031971 Igkv3-4A0A140T8Q4 119 aa4.28□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms