RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Gm20661K7N787 53 aa7.29□□□□□ -1.24
Ctr9-201ENSMUST00000005749 Prr13Q9CQJ5 137 aa7.29□□□□□ -1.24
Ctr9-201ENSMUST00000005749 Sox16Q62247 57 aa7.28□□□□□ -1.24
Ctr9-201ENSMUST00000005749 Rnase13Q5GAM7 153 aa7.27□□□□□ -1.25
Ctr9-201ENSMUST00000005749 Krtap15-1Q9QZU5 150 aa7.25□□□□□ -1.25
Ctr9-201ENSMUST00000005749 Krtap29-1A2A5X4 342 aa7.24□□□□□ -1.25
Ctr9-201ENSMUST00000005749 Krtap14O08640 167 aa7.24□□□□□ -1.25
Ctr9-201ENSMUST00000005749 A730071L15RikQ8C4X0 137 aa7.24□□□□□ -1.25
Ctr9-201ENSMUST00000005749 Gm9821Q8K076 103 aa7.23□□□□□ -1.25
Ctr9-201ENSMUST00000005749 2310034C09RikQ9D746 214 aa7.21□□□□□ -1.25
Ctr9-201ENSMUST00000005749 Cystm1Q8K353 104 aa7.21□□□□□ -1.26
Ctr9-201ENSMUST00000005749 CubnQ9JLB4 3623 aa7.21□□□□□ -1.26
Ctr9-201ENSMUST00000005749 Cdc42se1Q8BHL7 80 aa7.14□□□□□ -1.27
Ctr9-201ENSMUST00000005749 Gm10337F7DEP7 55 aa7.13□□□□□ -1.27
Ctr9-201ENSMUST00000005749 Gm16253D3Z167 63 aa7.13□□□□□ -1.27
Ctr9-201ENSMUST00000005749 Limd2Q8BGB5 128 aa7.1□□□□□ -1.27
Ctr9-201ENSMUST00000005749 Gm4491E0CX42 125 aa7.09□□□□□ -1.27
Ctr9-201ENSMUST00000005749 Tnp2P11378 117 aa7.07□□□□□ -1.28
Ctr9-201ENSMUST00000005749 Phxr4P15974 95 aa7.06□□□□□ -1.28
Ctr9-201ENSMUST00000005749 Gm21798J3QNU5 87 aa7.05□□□□□ -1.28
Ctr9-201ENSMUST00000005749 Gm12216A0A1W2P827 62 aa7.04□□□□□ -1.28
Ctr9-201ENSMUST00000005749 Rps28P62858 69 aaKnown RBP7.04□□□□□ -1.28
Ctr9-201ENSMUST00000005749 LystP97412 3788 aa7.04□□□□□ -1.28
Ctr9-201ENSMUST00000005749 Gm37013Q8K491 104 aa6.95□□□□□ -1.3
Ctr9-201ENSMUST00000005749 Gm5767A0A0J9YTU8 78 aa6.95□□□□□ -1.3
Ctr9-201ENSMUST00000005749 Spink7Q6IE32 76 aa6.94□□□□□ -1.3
Ctr9-201ENSMUST00000005749 Uqcr11Q9CPX8 56 aa6.94□□□□□ -1.3
Ctr9-201ENSMUST00000005749 Ank2Q8C8R3 3898 aa6.89□□□□□ -1.31
Ctr9-201ENSMUST00000005749 Sec61bQ9CQS8 96 aaKnown RBP6.86□□□□□ -1.31
Ctr9-201ENSMUST00000005749 Fam229aB2KGE5 128 aa6.85□□□□□ -1.31
Ctr9-201ENSMUST00000005749 Gm5965D3Z724 196 aa6.83□□□□□ -1.32
Ctr9-201ENSMUST00000005749 Xirp2Q4U4S6 3784 aa6.83□□□□□ -1.32
Ctr9-201ENSMUST00000005749 Gm10643Q3URG9 111 aa6.8□□□□□ -1.32
Ctr9-201ENSMUST00000005749 Gm3880A0A1B0GSB3 72 aa6.79□□□□□ -1.32
Ctr9-201ENSMUST00000005749 Hspg2Q05793 3707 aaKnown RBP6.75□□□□□ -1.33
Ctr9-201ENSMUST00000005749 BsnO88737 3942 aa6.73□□□□□ -1.33
Ctr9-201ENSMUST00000005749 Gm2310J3QNJ2 377 aa6.73□□□□□ -1.33
Ctr9-201ENSMUST00000005749 2310057N15RikQ9D6T8 200 aa6.72□□□□□ -1.33
Ctr9-201ENSMUST00000005749 Gm9955Q8CEJ8 102 aa6.67□□□□□ -1.34
Ctr9-201ENSMUST00000005749 Gm9918Q8BUR5 174 aa6.67□□□□□ -1.34
Ctr9-201ENSMUST00000005749 Gm9736A0A1W2P7N1 277 aa6.66□□□□□ -1.34
Ctr9-201ENSMUST00000005749 Mp68P56379 58 aa6.64□□□□□ -1.35
Ctr9-201ENSMUST00000005749 Pla2g10Q9QXX3 151 aa6.63□□□□□ -1.35
Ctr9-201ENSMUST00000005749 Gm19426M0QWC7 77 aa6.62□□□□□ -1.35
Ctr9-201ENSMUST00000005749 Rps29P62274 56 aa6.61□□□□□ -1.35
Ctr9-201ENSMUST00000005749 CriptO70333 101 aa6.59□□□□□ -1.35
Ctr9-201ENSMUST00000005749 Rpl37Q9D823 97 aa6.57□□□□□ -1.36
Ctr9-201ENSMUST00000005749 BC029722A0A0N4SW31 51 aa6.56□□□□□ -1.36
Ctr9-201ENSMUST00000005749 Dnah14A0A140LIJ4 4489 aa6.54□□□□□ -1.36
Ctr9-201ENSMUST00000005749 D6Ertd527eA0A0N4SWI3 464 aa6.51□□□□□ -1.37
Ctr9-201ENSMUST00000005749 Gm10382Q3V0T5 144 aa6.49□□□□□ -1.37
Ctr9-201ENSMUST00000005749 Csmd3Q80T79 3707 aa6.48□□□□□ -1.37
Ctr9-201ENSMUST00000005749 Cox6b2Q80ZN9 88 aa6.46□□□□□ -1.37
Ctr9-201ENSMUST00000005749 Camk2n1Q6QWF9 78 aa6.44□□□□□ -1.38
Ctr9-201ENSMUST00000005749 A930033H14RikG5E8X6 103 aa6.4□□□□□ -1.38
Ctr9-201ENSMUST00000005749 Gm3646F6S692 53 aa6.4□□□□□ -1.39
Ctr9-201ENSMUST00000005749 Dnah10D3YYQ8 4591 aa6.37□□□□□ -1.39
Ctr9-201ENSMUST00000005749 Krtap19-5O08632 62 aa6.35□□□□□ -1.39
Ctr9-201ENSMUST00000005749 Gm10318A0A1W2P728 225 aa6.33□□□□□ -1.4
Ctr9-201ENSMUST00000005749 Ryr1E9PZQ0 5035 aa6.32□□□□□ -1.4
Ctr9-201ENSMUST00000005749 SmcpP15265 143 aa6.32□□□□□ -1.4
Ctr9-201ENSMUST00000005749 Crct1Q6PAI5 102 aa6.24□□□□□ -1.41
Ctr9-201ENSMUST00000005749 TnxbO35452 4006 aa6.23□□□□□ -1.41
Ctr9-201ENSMUST00000005749 4933415A04RikQ9D443 101 aa6.23□□□□□ -1.41
Ctr9-201ENSMUST00000005749 Huwe1Q7TMY8 4377 aaKnown RBP6.23□□□□□ -1.41
Ctr9-201ENSMUST00000005749 Romo1P60603 79 aa6.21□□□□□ -1.42
Ctr9-201ENSMUST00000005749 Gm11939A2A592 99 aa6.13□□□□□ -1.43
Ctr9-201ENSMUST00000005749 Dnah5Q8VHE6 4621 aa6.11□□□□□ -1.43
Ctr9-201ENSMUST00000005749 2310079G19RikQ9D6L6 185 aa6.11□□□□□ -1.43
Ctr9-201ENSMUST00000005749 Gm20538F6Z9R1 75 aa6.09□□□□□ -1.43
Ctr9-201ENSMUST00000005749 PlecQ9QXS1 4691 aaKnown RBP6.08□□□□□ -1.44
Ctr9-201ENSMUST00000005749 Dnah7bL7N1Y0 4068 aa6.05□□□□□ -1.44
Ctr9-201ENSMUST00000005749 Kmt2aP55200 3966 aa6.01□□□□□ -1.45
Ctr9-201ENSMUST00000005749 Gm17416Q30KP4 66 aa6.01□□□□□ -1.45
Ctr9-201ENSMUST00000005749 Gm21887J3QQ04 176 aa6.01□□□□□ -1.45
Ctr9-201ENSMUST00000005749 1700042G07RikB1AUF7 90 aa6□□□□□ -1.45
Ctr9-201ENSMUST00000005749 Gm20537G3UYK7 97 aa5.99□□□□□ -1.45
Ctr9-201ENSMUST00000005749 Stard9Q80TF6 4561 aa5.99□□□□□ -1.45
Ctr9-201ENSMUST00000005749 Ryr3A2AGL3 4863 aa5.98□□□□□ -1.45
Ctr9-201ENSMUST00000005749 HydinQ80W93 5154 aa5.95□□□□□ -1.46
Ctr9-201ENSMUST00000005749 Vps13dB1ART2 4390 aa5.95□□□□□ -1.46
Ctr9-201ENSMUST00000005749 2210017I01RikA0A0A6YVV1 95 aa5.94□□□□□ -1.46
Ctr9-201ENSMUST00000005749 Mycbp2Q7TPH6 4711 aa5.93□□□□□ -1.46
Ctr9-201ENSMUST00000005749 Dnah3Q8BW94 4083 aa5.92□□□□□ -1.46
Ctr9-201ENSMUST00000005749 Dnah6E9Q0B6 4144 aa5.92□□□□□ -1.46
Ctr9-201ENSMUST00000005749 Dnah9B1AR51 4484 aa5.87□□□□□ -1.47
Ctr9-201ENSMUST00000005749 Krtap13-1Q8K198 168 aa5.87□□□□□ -1.47
Ctr9-201ENSMUST00000005749 Dnah11E9Q7N9 4488 aa5.86□□□□□ -1.47
Ctr9-201ENSMUST00000005749 Dnah17Q69Z23 4481 aa5.85□□□□□ -1.47
Ctr9-201ENSMUST00000005749 B930094E09RikQ8C4T2 136 aa5.84□□□□□ -1.47
Ctr9-201ENSMUST00000005749 Krtap3-2Q9D638 99 aa5.83□□□□□ -1.48
Ctr9-201ENSMUST00000005749 Krtap3-3Q9D7P0 99 aa5.83□□□□□ -1.48
Ctr9-201ENSMUST00000005749 PrkdcP97313 4128 aa5.83□□□□□ -1.48
Ctr9-201ENSMUST00000005749 Gm18596A0A1W2P860 280 aa5.83□□□□□ -1.48
Ctr9-201ENSMUST00000005749 Kiaa1109A2AAE1 5005 aa5.8□□□□□ -1.48
Ctr9-201ENSMUST00000005749 Dnah1E9Q8T7 4250 aa5.76□□□□□ -1.49
Ctr9-201ENSMUST00000005749 Herc2Q4U2R1 4836 aa5.74□□□□□ -1.49
Ctr9-201ENSMUST00000005749 Fat3Q8BNA6 4555 aa5.74□□□□□ -1.49
Ctr9-201ENSMUST00000005749 Lrp1bQ9JI18 4599 aa5.73□□□□□ -1.49
Ctr9-201ENSMUST00000005749 Lrp1Q91ZX7 4545 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms