RNA–Protein interactions for RNA: ENSMUST00000190080.6

Trerf1-205, Transcript of Transcriptional-regulating factor 1, mousemouse

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Gene Trerf1, Length 7,045 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1-205ENSMUST00000190080 Szt2A2A9C3 3431 aa5.6□□□□□ -1.51
Trerf1-205ENSMUST00000190080 Bod1lE9Q6J5 3032 aa5.6□□□□□ -1.51
Trerf1-205ENSMUST00000190080 Gm11565A2A4M7 156 aa5.59□□□□□ -1.51
Trerf1-205ENSMUST00000190080 Gm10139O88245 57 aa5.57□□□□□ -1.52
Trerf1-205ENSMUST00000190080 Unc80Q8BLN6 3261 aa5.57□□□□□ -1.52
Trerf1-205ENSMUST00000190080 Romo1P60603 79 aa5.56□□□□□ -1.52
Trerf1-205ENSMUST00000190080 Rev3lQ61493 3122 aa5.56□□□□□ -1.52
Trerf1-205ENSMUST00000190080 Gm3646F6S692 53 aa5.56□□□□□ -1.52
Trerf1-205ENSMUST00000190080 Krtap13O88375 197 aa5.56□□□□□ -1.52
Trerf1-205ENSMUST00000190080 Unc79Q0KK59 2596 aa5.55□□□□□ -1.52
Trerf1-205ENSMUST00000190080 Sec61bQ9CQS8 96 aaKnown RBP5.54□□□□□ -1.52
Trerf1-205ENSMUST00000190080 Krtap10-10A0A1W2P7T6 217 aa5.53□□□□□ -1.52
Trerf1-205ENSMUST00000190080 Col6a3E9PWQ3 3284 aa5.53□□□□□ -1.52
Trerf1-205ENSMUST00000190080 Sprr1aQ62266 144 aa5.53□□□□□ -1.52
Trerf1-205ENSMUST00000190080 Vps13aQ5H8C4 3166 aa5.52□□□□□ -1.53
Trerf1-205ENSMUST00000190080 Gm9195A0A140LHT4 2805 aa5.51□□□□□ -1.53
Trerf1-205ENSMUST00000190080 Gm5767A0A0J9YTU8 78 aa5.5□□□□□ -1.53
Trerf1-205ENSMUST00000190080 Krtap29-1A2A5X4 342 aa5.5□□□□□ -1.53
Trerf1-205ENSMUST00000190080 Gm10382Q3V0T5 144 aa5.49□□□□□ -1.53
Trerf1-205ENSMUST00000190080 AtmQ62388 3066 aa5.48□□□□□ -1.53
Trerf1-205ENSMUST00000190080 Gm37013Q8K491 104 aa5.47□□□□□ -1.53
Trerf1-205ENSMUST00000190080 Usp9yF8VPU6 2556 aa5.46□□□□□ -1.53
Trerf1-205ENSMUST00000190080 Rpl37Q9D823 97 aa5.46□□□□□ -1.54
Trerf1-205ENSMUST00000190080 PolqQ8CGS6 2544 aa5.46□□□□□ -1.54
Trerf1-205ENSMUST00000190080 2310050C09RikG5E8Z3 280 aa5.45□□□□□ -1.54
Trerf1-205ENSMUST00000190080 Gm19426M0QWC7 77 aa5.45□□□□□ -1.54
Trerf1-205ENSMUST00000190080 Nbeal1E9PYP2 2688 aa5.44□□□□□ -1.54
Trerf1-205ENSMUST00000190080 FlnaQ8BTM8 2647 aaKnown RBP5.43□□□□□ -1.54
Trerf1-205ENSMUST00000190080 AtrQ9JKK8 2635 aa5.42□□□□□ -1.54
Trerf1-205ENSMUST00000190080 Gm16253D3Z167 63 aa5.42□□□□□ -1.54
Trerf1-205ENSMUST00000190080 VcanQ62059 3357 aa5.42□□□□□ -1.54
Trerf1-205ENSMUST00000190080 SpegQ62407 3262 aa5.42□□□□□ -1.54
Trerf1-205ENSMUST00000190080 Ndufaf8A2AMZ4 74 aa5.42□□□□□ -1.54
Trerf1-205ENSMUST00000190080 Ankrd11E9Q4F7 2643 aa5.42□□□□□ -1.54
Trerf1-205ENSMUST00000190080 Usp24B1AY13 2617 aaKnown RBP5.42□□□□□ -1.54
Trerf1-205ENSMUST00000190080 Cystm1Q8K353 104 aa5.41□□□□□ -1.54
Trerf1-205ENSMUST00000190080 Celsr3Q91ZI0 3301 aa5.39□□□□□ -1.55
Trerf1-205ENSMUST00000190080 Gm2696A0A1W2P709 240 aa5.38□□□□□ -1.55
Trerf1-205ENSMUST00000190080 Brca2P97929 3329 aa5.37□□□□□ -1.55
Trerf1-205ENSMUST00000190080 Frem2Q6NVD0 3160 aa5.37□□□□□ -1.55
Trerf1-205ENSMUST00000190080 MgaA2AWL7 3003 aaKnown RBP5.36□□□□□ -1.55
Trerf1-205ENSMUST00000190080 Tnp2P11378 117 aa5.36□□□□□ -1.55
Trerf1-205ENSMUST00000190080 Zfhx3Q61329 3726 aa5.35□□□□□ -1.55
Trerf1-205ENSMUST00000190080 Ranbp2Q9ERU9 3053 aaKnown RBP5.35□□□□□ -1.55
Trerf1-205ENSMUST00000190080 1700042G07RikB1AUF7 90 aa5.33□□□□□ -1.56
Trerf1-205ENSMUST00000190080 BC029722A0A0N4SW31 51 aa5.33□□□□□ -1.56
Trerf1-205ENSMUST00000190080 Krtap14O08640 167 aa5.33□□□□□ -1.56
Trerf1-205ENSMUST00000190080 A730071L15RikQ8C4X0 137 aa5.32□□□□□ -1.56
Trerf1-205ENSMUST00000190080 Myo15aQ9QZZ4 3511 aa5.32□□□□□ -1.56
Trerf1-205ENSMUST00000190080 Hectd1Q69ZR2 2618 aaKnown RBP5.31□□□□□ -1.56
Trerf1-205ENSMUST00000190080 FlnbQ80X90 2602 aaKnown RBP5.31□□□□□ -1.56
Trerf1-205ENSMUST00000190080 Gm9112A2AI92 75 aa5.3□□□□□ -1.56
Trerf1-205ENSMUST00000190080 BptfA2A654 3036 aaKnown RBP5.3□□□□□ -1.56
Trerf1-205ENSMUST00000190080 HrnrQ8VHD8 2496 aa5.3□□□□□ -1.56
Trerf1-205ENSMUST00000190080 Myo18bE9PV66 2605 aa5.29□□□□□ -1.56
Trerf1-205ENSMUST00000190080 Gcn1E9PVA8 2671 aaKnown RBP5.29□□□□□ -1.56
Trerf1-205ENSMUST00000190080 Cfap54Q8C6S9 3106 aa5.28□□□□□ -1.56
Trerf1-205ENSMUST00000190080 4933415A04RikQ9D443 101 aa5.26□□□□□ -1.57
Trerf1-205ENSMUST00000190080 2310061N02RikQ9D6S9 174 aa5.26□□□□□ -1.57
Trerf1-205ENSMUST00000190080 Lrrc37aB1AWG4 3215 aa5.25□□□□□ -1.57
Trerf1-205ENSMUST00000190080 Wdfy3Q6VNB8 3508 aa5.24□□□□□ -1.57
Trerf1-205ENSMUST00000190080 2310057N15RikQ9D6T8 200 aa5.24□□□□□ -1.57
Trerf1-205ENSMUST00000190080 Fn1P11276 2477 aaKnown RBP5.24□□□□□ -1.57
Trerf1-205ENSMUST00000190080 FasnP19096 2504 aaKnown RBP5.23□□□□□ -1.57
Trerf1-205ENSMUST00000190080 Dchs1E9PVD3 3291 aa5.22□□□□□ -1.57
Trerf1-205ENSMUST00000190080 Prrc2cQ3TLH4 2846 aaKnown RBP5.21□□□□□ -1.58
Trerf1-205ENSMUST00000190080 Chd7A2AJK6 2986 aaKnown RBP5.21□□□□□ -1.58
Trerf1-205ENSMUST00000190080 FrylF8VQ05 3007 aa5.2□□□□□ -1.58
Trerf1-205ENSMUST00000190080 AspmQ8CJ27 3122 aa5.2□□□□□ -1.58
Trerf1-205ENSMUST00000190080 Akap13E9Q394 2776 aa5.19□□□□□ -1.58
Trerf1-205ENSMUST00000190080 Dmxl1Q6PNC0 3013 aa5.18□□□□□ -1.58
Trerf1-205ENSMUST00000190080 Stab1Q8R4Y4 2571 aa5.17□□□□□ -1.58
Trerf1-205ENSMUST00000190080 Notch1Q01705 2531 aa5.17□□□□□ -1.58
Trerf1-205ENSMUST00000190080 SmcpP15265 143 aa5.16□□□□□ -1.58
Trerf1-205ENSMUST00000190080 Gm21887J3QQ04 176 aa5.15□□□□□ -1.59
Trerf1-205ENSMUST00000190080 Gm5965D3Z724 196 aa5.14□□□□□ -1.59
Trerf1-205ENSMUST00000190080 Tnrc18Q80WC3 2878 aa5.14□□□□□ -1.59
Trerf1-205ENSMUST00000190080 NipblQ6KCD5 2798 aaKnown RBP5.13□□□□□ -1.59
Trerf1-205ENSMUST00000190080 Itpr3P70227 2670 aa5.13□□□□□ -1.59
Trerf1-205ENSMUST00000190080 Lama1P19137 3084 aa5.12□□□□□ -1.59
Trerf1-205ENSMUST00000190080 Gm2310J3QNJ2 377 aa5.1□□□□□ -1.59
Trerf1-205ENSMUST00000190080 DmdP11531 3678 aa5.1□□□□□ -1.59
Trerf1-205ENSMUST00000190080 Ash1lQ99MY8 2958 aa5.1□□□□□ -1.59
Trerf1-205ENSMUST00000190080 Rps29P62274 56 aa5.09□□□□□ -1.59
Trerf1-205ENSMUST00000190080 KalrnA2CG49 2964 aa5.09□□□□□ -1.59
Trerf1-205ENSMUST00000190080 Igsf10Q3V1M1 2594 aa5.09□□□□□ -1.59
Trerf1-205ENSMUST00000190080 Cox6b2Q80ZN9 88 aa5.09□□□□□ -1.59
Trerf1-205ENSMUST00000190080 Dchs2A0A0A6YW72 3346 aa5.09□□□□□ -1.6
Trerf1-205ENSMUST00000190080 Mast4Q811L6 2618 aa5.08□□□□□ -1.6
Trerf1-205ENSMUST00000190080 Itpr1P11881 2749 aa5.08□□□□□ -1.6
Trerf1-205ENSMUST00000190080 Tnp1P10856 55 aa5.07□□□□□ -1.6
Trerf1-205ENSMUST00000190080 Fbn2Q61555 2907 aa5.06□□□□□ -1.6
Trerf1-205ENSMUST00000190080 Myo15bI7HPW8 3033 aa5.06□□□□□ -1.6
Trerf1-205ENSMUST00000190080 FryE9Q8I9 3020 aa5.05□□□□□ -1.6
Trerf1-205ENSMUST00000190080 Wdfy4E9Q2M9 3149 aa5.04□□□□□ -1.6
Trerf1-205ENSMUST00000190080 Map1aQ9QYR6 2776 aa5.04□□□□□ -1.6
Trerf1-205ENSMUST00000190080 Vps13cQ8BX70 3748 aa5.04□□□□□ -1.6
Trerf1-205ENSMUST00000190080 Akap9Q70FJ1 3797 aa5.04□□□□□ -1.6
Trerf1-205ENSMUST00000190080 Chd6A3KFM7 2711 aa5.02□□□□□ -1.61
Trerf1-205ENSMUST00000190080 Celsr1O35161 3034 aa5.02□□□□□ -1.61
Retrieved 100 of 22,080 RNA–protein pairs in 50.6 ms