RNA–Protein interactions for RNA: ENSMUST00000165443.2

Nup50-201, Transcript of Nuclear pore complex protein Nup50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup50, Length 4,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50-201ENSMUST00000165443 Gm3250E9Q1M3 230 aa6.93□□□□□ -1.3
Nup50-201ENSMUST00000165443 CnbpP53996 178 aaKnown RBP6.93□□□□□ -1.3
Nup50-201ENSMUST00000165443 Mp68P56379 58 aa6.92□□□□□ -1.3
Nup50-201ENSMUST00000165443 Cypt15B1AXS0 87 aa6.92□□□□□ -1.3
Nup50-201ENSMUST00000165443 Akap13E9Q394 2776 aa6.9□□□□□ -1.3
Nup50-201ENSMUST00000165443 Mast4Q811L6 2618 aa6.9□□□□□ -1.31
Nup50-201ENSMUST00000165443 Defb1P56386 69 aa6.89□□□□□ -1.31
Nup50-201ENSMUST00000165443 Vps13cQ8BX70 3748 aa6.89□□□□□ -1.31
Nup50-201ENSMUST00000165443 Fam104aA2A6P4 185 aa6.89□□□□□ -1.31
Nup50-201ENSMUST00000165443 RelnQ60841 3461 aa6.89□□□□□ -1.31
Nup50-201ENSMUST00000165443 Zfhx4Q9JJN2 3550 aa6.88□□□□□ -1.31
Nup50-201ENSMUST00000165443 Chtf8P0CG14 533 aa6.87□□□□□ -1.31
Nup50-201ENSMUST00000165443 Dchs1E9PVD3 3291 aa6.87□□□□□ -1.31
Nup50-201ENSMUST00000165443 NbeaQ9EPN1 2936 aa6.87□□□□□ -1.31
Nup50-201ENSMUST00000165443 Defb9Q8R2I6 67 aa6.85□□□□□ -1.31
Nup50-201ENSMUST00000165443 Zcchc13Q9D548 170 aa6.85□□□□□ -1.31
Nup50-201ENSMUST00000165443 Ash1lQ99MY8 2958 aa6.84□□□□□ -1.31
Nup50-201ENSMUST00000165443 Kmt2bO08550 2713 aa6.83□□□□□ -1.32
Nup50-201ENSMUST00000165443 Itpr3P70227 2670 aa6.82□□□□□ -1.32
Nup50-201ENSMUST00000165443 Trank1Q8BV79 2999 aa6.82□□□□□ -1.32
Nup50-201ENSMUST00000165443 RetnlbQ99P86 105 aa6.81□□□□□ -1.32
Nup50-201ENSMUST00000165443 Gcn1E9PVA8 2671 aaKnown RBP6.81□□□□□ -1.32
Nup50-201ENSMUST00000165443 Lelp1Q9DAE3 120 aa6.81□□□□□ -1.32
Nup50-201ENSMUST00000165443 SmcpP15265 143 aa6.81□□□□□ -1.32
Nup50-201ENSMUST00000165443 Fam229bQ8CF36 80 aa6.81□□□□□ -1.32
Nup50-201ENSMUST00000165443 Gm26620Q9CY65 116 aa6.8□□□□□ -1.32
Nup50-201ENSMUST00000165443 Gm9195A0A140LHT4 2805 aa6.79□□□□□ -1.32
Nup50-201ENSMUST00000165443 Adgrg4B7ZCC9 3073 aa6.78□□□□□ -1.32
Nup50-201ENSMUST00000165443 Ubr5Q80TP3 2792 aa6.78□□□□□ -1.32
Nup50-201ENSMUST00000165443 Prrc2cQ3TLH4 2846 aaKnown RBP6.78□□□□□ -1.32
Nup50-201ENSMUST00000165443 Phxr5P08399 672 aa6.78□□□□□ -1.32
Nup50-201ENSMUST00000165443 Notch1Q01705 2531 aa6.77□□□□□ -1.32
Nup50-201ENSMUST00000165443 FlnaQ8BTM8 2647 aaKnown RBP6.76□□□□□ -1.33
Nup50-201ENSMUST00000165443 Gm884A2A9H6 3643 aa6.76□□□□□ -1.33
Nup50-201ENSMUST00000165443 Akap9Q70FJ1 3797 aa6.76□□□□□ -1.33
Nup50-201ENSMUST00000165443 Cypt14J3QPF7 87 aa6.76□□□□□ -1.33
Nup50-201ENSMUST00000165443 Nsd1O88491 2588 aaKnown RBP6.75□□□□□ -1.33
Nup50-201ENSMUST00000165443 Gm21798J3QNU5 87 aa6.75□□□□□ -1.33
Nup50-201ENSMUST00000165443 Rnase13Q5GAM7 153 aa6.74□□□□□ -1.33
Nup50-201ENSMUST00000165443 2310034C09RikQ9D746 214 aa6.74□□□□□ -1.33
Nup50-201ENSMUST00000165443 Muc2Q80Z19 2680 aa6.73□□□□□ -1.33
Nup50-201ENSMUST00000165443 Anapc11Q9CPX9 84 aa6.72□□□□□ -1.33
Nup50-201ENSMUST00000165443 Gm10065F6TJM2 114 aa6.72□□□□□ -1.33
Nup50-201ENSMUST00000165443 DspE9Q557 2883 aaKnown RBP6.71□□□□□ -1.33
Nup50-201ENSMUST00000165443 Zzef1Q5SSH7 2924 aa6.71□□□□□ -1.34
Nup50-201ENSMUST00000165443 Dmbt1Q60997 2085 aa6.71□□□□□ -1.34
Nup50-201ENSMUST00000165443 Plac8Q9JI48 112 aa6.71□□□□□ -1.34
Nup50-201ENSMUST00000165443 HrnrQ8VHD8 2496 aa6.7□□□□□ -1.34
Nup50-201ENSMUST00000165443 NbdyA0A0N4SUI7 68 aa6.69□□□□□ -1.34
Nup50-201ENSMUST00000165443 Gm10320E9PW43 113 aa6.69□□□□□ -1.34
Nup50-201ENSMUST00000165443 OxtP35454 125 aa6.69□□□□□ -1.34
Nup50-201ENSMUST00000165443 Smim29Q8R043 75 aa6.69□□□□□ -1.34
Nup50-201ENSMUST00000165443 Tep1P97499 2629 aa6.67□□□□□ -1.34
Nup50-201ENSMUST00000165443 Gm20538F6Z9R1 75 aa6.65□□□□□ -1.35
Nup50-201ENSMUST00000165443 NipblQ6KCD5 2798 aaKnown RBP6.64□□□□□ -1.35
Nup50-201ENSMUST00000165443 Utp20Q5XG71 2788 aaKnown RBP6.64□□□□□ -1.35
Nup50-201ENSMUST00000165443 Gm3233E9Q2H5 230 aa6.63□□□□□ -1.35
Nup50-201ENSMUST00000165443 CriptO70333 101 aa6.63□□□□□ -1.35
Nup50-201ENSMUST00000165443 Chd6A3KFM7 2711 aa6.63□□□□□ -1.35
Nup50-201ENSMUST00000165443 6030445D17RikE9Q8F9 148 aa6.61□□□□□ -1.35
Nup50-201ENSMUST00000165443 Gm9955Q8CEJ8 102 aa6.6□□□□□ -1.35
Nup50-201ENSMUST00000165443 FlncQ8VHX6 2726 aaKnown RBP6.6□□□□□ -1.35
Nup50-201ENSMUST00000165443 Gm10139O88245 57 aa6.6□□□□□ -1.35
Nup50-201ENSMUST00000165443 Cystm1Q8K353 104 aa6.59□□□□□ -1.35
Nup50-201ENSMUST00000165443 Odf3bQ5M8M2 238 aa6.59□□□□□ -1.35
Nup50-201ENSMUST00000165443 Stab1Q8R4Y4 2571 aa6.58□□□□□ -1.36
Nup50-201ENSMUST00000165443 SpenQ62504 3644 aaKnown RBP6.58□□□□□ -1.36
Nup50-201ENSMUST00000165443 Lama5Q61001 3718 aa6.58□□□□□ -1.36
Nup50-201ENSMUST00000165443 Sprr1aQ62266 144 aa6.57□□□□□ -1.36
Nup50-201ENSMUST00000165443 Muc5acE9QAQ8 3455 aa6.57□□□□□ -1.36
Nup50-201ENSMUST00000165443 A730071L15RikQ8C4X0 137 aa6.55□□□□□ -1.36
Nup50-201ENSMUST00000165443 Igsf10Q3V1M1 2594 aa6.53□□□□□ -1.36
Nup50-201ENSMUST00000165443 Gm9821Q8K076 103 aa6.51□□□□□ -1.37
Nup50-201ENSMUST00000165443 Gm3880A0A1B0GSB3 72 aa6.51□□□□□ -1.37
Nup50-201ENSMUST00000165443 Gm16253D3Z167 63 aa6.51□□□□□ -1.37
Nup50-201ENSMUST00000165443 Gm4491E0CX42 125 aa6.51□□□□□ -1.37
Nup50-201ENSMUST00000165443 Smg1Q8BKX6 3658 aaKnown RBP6.49□□□□□ -1.37
Nup50-201ENSMUST00000165443 Gm7138L7N2C3 230 aa6.49□□□□□ -1.37
Nup50-201ENSMUST00000165443 Gm3238W4VSP7 230 aa6.49□□□□□ -1.37
Nup50-201ENSMUST00000165443 9530053A07RikE9PVG8 2581 aa6.48□□□□□ -1.37
Nup50-201ENSMUST00000165443 Gm37013Q8K491 104 aa6.45□□□□□ -1.38
Nup50-201ENSMUST00000165443 Gm3646F6S692 53 aa6.44□□□□□ -1.38
Nup50-201ENSMUST00000165443 Celsr2Q9R0M0 2920 aa6.43□□□□□ -1.38
Nup50-201ENSMUST00000165443 Pla2g10Q9QXX3 151 aa6.42□□□□□ -1.38
Nup50-201ENSMUST00000165443 Csmd1Q923L3 3564 aa6.39□□□□□ -1.39
Nup50-201ENSMUST00000165443 Stab2Q8R4U0 2559 aa6.38□□□□□ -1.39
Nup50-201ENSMUST00000165443 Pkd1l1Q8R526 2615 aa6.38□□□□□ -1.39
Nup50-201ENSMUST00000165443 Gm7137J3QMW1 236 aa6.38□□□□□ -1.39
Nup50-201ENSMUST00000165443 Nf1Q04690 2841 aa6.37□□□□□ -1.39
Nup50-201ENSMUST00000165443 OtogO55225 2910 aa6.36□□□□□ -1.39
Nup50-201ENSMUST00000165443 Spink7Q6IE32 76 aa6.36□□□□□ -1.39
Nup50-201ENSMUST00000165443 LrbaQ9ESE1 2856 aa6.34□□□□□ -1.39
Nup50-201ENSMUST00000165443 Tenm3Q9WTS6 2715 aa6.34□□□□□ -1.4
Nup50-201ENSMUST00000165443 4933415A04RikQ9D443 101 aa6.33□□□□□ -1.4
Nup50-201ENSMUST00000165443 Chd9Q8BYH8 2885 aa6.32□□□□□ -1.4
Nup50-201ENSMUST00000165443 Krtap29-1A2A5X4 342 aa6.32□□□□□ -1.4
Nup50-201ENSMUST00000165443 Gm17349F7BGH6 99 aa6.31□□□□□ -1.4
Nup50-201ENSMUST00000165443 Zfhx3Q61329 3726 aa6.31□□□□□ -1.4
Nup50-201ENSMUST00000165443 1700042G07RikB1AUF7 90 aa6.3□□□□□ -1.4
Nup50-201ENSMUST00000165443 Rpl37Q9D823 97 aa6.3□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 1137.1 ms