RNA–Protein interactions for RNA: ENSMUST00000165443.2

Nup50-201, Transcript of Nuclear pore complex protein Nup50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup50, Length 4,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50-201ENSMUST00000165443 Rhox8Q6VSS7 320 aa18.64■□□□□ 0.57
Nup50-201ENSMUST00000165443 Rpgrip1Q9EPQ2 1331 aa17.5■□□□□ 0.39
Nup50-201ENSMUST00000165443 NischQ80TM9 1593 aa17.39■□□□□ 0.37
Nup50-201ENSMUST00000165443 Gm35339A0A140LHH9 1649 aa16.79■□□□□ 0.28
Nup50-201ENSMUST00000165443 Abcc9P70170 1546 aa16.72■□□□□ 0.27
Nup50-201ENSMUST00000165443 Las1lA2BE28 776 aaKnown RBP16.69■□□□□ 0.26
Nup50-201ENSMUST00000165443 Cngb1E1AZ71 1325 aa16.69■□□□□ 0.26
Nup50-201ENSMUST00000165443 Ehmt2Q9Z148 1263 aaKnown RBP16.63■□□□□ 0.25
Nup50-201ENSMUST00000165443 Ccdc136Q3TVA9 1136 aa16.48■□□□□ 0.23
Nup50-201ENSMUST00000165443 Abcc8B2RUS7 1588 aa16.45■□□□□ 0.22
Nup50-201ENSMUST00000165443 Esf1Q3V1V3 845 aaKnown RBP16.36■□□□□ 0.21
Nup50-201ENSMUST00000165443 Trim41Q5NCC3 630 aa16.36■□□□□ 0.21
Nup50-201ENSMUST00000165443 Wdr66E9Q743 1299 aa16.34■□□□□ 0.21
Nup50-201ENSMUST00000165443 Pelp1Q9DBD5 1123 aaKnown RBP16.28■□□□□ 0.2
Nup50-201ENSMUST00000165443 Zeb1Q64318 1117 aa16.17■□□□□ 0.18
Nup50-201ENSMUST00000165443 Gab3Q8BSM5 595 aa16.16■□□□□ 0.18
Nup50-201ENSMUST00000165443 Ube2uB1AUC4 352 aa16.08■□□□□ 0.17
Nup50-201ENSMUST00000165443 Acin1Q9JIX8 1338 aaKnown RBP16.05■□□□□ 0.16
Nup50-201ENSMUST00000165443 Npm2Q80W85 207 aa16.04■□□□□ 0.16
Nup50-201ENSMUST00000165443 NefmP08553 848 aa15.99■□□□□ 0.15
Nup50-201ENSMUST00000165443 Myt1lP97500 1187 aa15.89■□□□□ 0.13
Nup50-201ENSMUST00000165443 CenpbP27790 599 aa15.86■□□□□ 0.13
Nup50-201ENSMUST00000165443 HrcG5E8J6 738 aa15.82■□□□□ 0.12
Nup50-201ENSMUST00000165443 Stra8P70278 393 aa15.79■□□□□ 0.12
Nup50-201ENSMUST00000165443 Ccdc180J3QNE4 1664 aa15.7■□□□□ 0.1
Nup50-201ENSMUST00000165443 UbtfP25976 765 aaKnown RBP15.66■□□□□ 0.1
Nup50-201ENSMUST00000165443 Cdk11bP24788 784 aaKnown RBP15.5■□□□□ 0.07
Nup50-201ENSMUST00000165443 Rtl1Q7M732 1744 aa15.47■□□□□ 0.07
Nup50-201ENSMUST00000165443 Pcgf6Q99NA9 353 aa15.45■□□□□ 0.06
Nup50-201ENSMUST00000165443 Myt1Q8CFC2 1127 aa15.45■□□□□ 0.06
Nup50-201ENSMUST00000165443 Amer1Q7TS75 1132 aa15.41■□□□□ 0.06
Nup50-201ENSMUST00000165443 Tnnt3Q9QZ47 272 aa15.38■□□□□ 0.05
Nup50-201ENSMUST00000165443 Slc24a1Q91WD8 1130 aa15.35■□□□□ 0.05
Nup50-201ENSMUST00000165443 Dcaf1Q80TR8 1506 aa15.32■□□□□ 0.04
Nup50-201ENSMUST00000165443 Nop58Q6DFW4 536 aaKnown RBP15.3■□□□□ 0.04
Nup50-201ENSMUST00000165443 Anp32bQ9EST5 272 aaKnown RBP15.26■□□□□ 0.03
Nup50-201ENSMUST00000165443 ScribQ80U72 1612 aa15.26■□□□□ 0.03
Nup50-201ENSMUST00000165443 NrdcQ8BHG1 1161 aa15.24■□□□□ 0.03
Nup50-201ENSMUST00000165443 Il27Q8K3I6 234 aa15.24■□□□□ 0.03
Nup50-201ENSMUST00000165443 NacadQ5SWP3 1504 aa15.24■□□□□ 0.03
Nup50-201ENSMUST00000165443 Rb1cc1Q9ESK9 1588 aa15.22■□□□□ 0.03
Nup50-201ENSMUST00000165443 NclP09405 707 aaKnown RBP15.18■□□□□ 0.02
Nup50-201ENSMUST00000165443 Zcchc6Q5BLK4 1491 aaKnown RBP15.18■□□□□ 0.02
Nup50-201ENSMUST00000165443 Fam50aQ9WV03 339 aaKnown RBP15.16■□□□□ 0.02
Nup50-201ENSMUST00000165443 Kdm5dQ62240 1548 aa15.16■□□□□ 0.02
Nup50-201ENSMUST00000165443 TonslQ6NZL6 1363 aa15.12■□□□□ 0.01
Nup50-201ENSMUST00000165443 Supt5hO55201 1082 aaKnown RBP15.09■□□□□ 0.01
Nup50-201ENSMUST00000165443 NeflP08551 543 aa15.09■□□□□ 0.01
Nup50-201ENSMUST00000165443 Rtl5Q5DTT4 599 aa15.04■□□□□ -0
Nup50-201ENSMUST00000165443 Ap3b1Q9Z1T1 1105 aa15.02□□□□□ -0.01
Nup50-201ENSMUST00000165443 Baz1aO88379 1555 aa15.02□□□□□ -0.01
Nup50-201ENSMUST00000165443 Neurod1Q60867 357 aa15□□□□□ -0.01
Nup50-201ENSMUST00000165443 4933416C03RikQ3V063 378 aa15□□□□□ -0.01
Nup50-201ENSMUST00000165443 Mier1Q5UAK0 511 aa15□□□□□ -0.01
Nup50-201ENSMUST00000165443 4930567H17RikQ3V0K5 233 aa14.99□□□□□ -0.01
Nup50-201ENSMUST00000165443 Eif5bQ05D44 1216 aaKnown RBP14.94□□□□□ -0.02
Nup50-201ENSMUST00000165443 Ttbk1Q6PCN3 1308 aa14.91□□□□□ -0.02
Nup50-201ENSMUST00000165443 ClspnQ80YR7 1315 aa14.9□□□□□ -0.02
Nup50-201ENSMUST00000165443 Ppargc1bQ8VHJ7 1014 aa14.89□□□□□ -0.03
Nup50-201ENSMUST00000165443 Os9Q8K2C7 672 aa14.87□□□□□ -0.03
Nup50-201ENSMUST00000165443 Sycp2Q9CUU3 1500 aa14.8□□□□□ -0.04
Nup50-201ENSMUST00000165443 Crybg2B7ZCC2 1516 aa14.77□□□□□ -0.04
Nup50-201ENSMUST00000165443 Anp32aO35381 247 aa14.75□□□□□ -0.05
Nup50-201ENSMUST00000165443 Npm1Q61937 292 aaKnown RBP14.73□□□□□ -0.05
Nup50-201ENSMUST00000165443 Plekhg3Q4VAC9 1341 aa14.7□□□□□ -0.06
Nup50-201ENSMUST00000165443 Lmod2Q3UHZ5 550 aa14.67□□□□□ -0.06
Nup50-201ENSMUST00000165443 Anks4bQ8K3X6 423 aa14.64□□□□□ -0.07
Nup50-201ENSMUST00000165443 Cep164Q5DU05 1446 aa14.64□□□□□ -0.07
Nup50-201ENSMUST00000165443 Ccer2J3QPU5 274 aa14.63□□□□□ -0.07
Nup50-201ENSMUST00000165443 Brd4Q9ESU6 1400 aaKnown RBP14.62□□□□□ -0.07
Nup50-201ENSMUST00000165443 Hdac5Q9Z2V6 1113 aa14.58□□□□□ -0.08
Nup50-201ENSMUST00000165443 Sall2Q9QX96 1004 aa14.56□□□□□ -0.08
Nup50-201ENSMUST00000165443 Clip1Q922J3 1391 aa14.56□□□□□ -0.08
Nup50-201ENSMUST00000165443 Smarca2Q6DIC0 1577 aa14.53□□□□□ -0.08
Nup50-201ENSMUST00000165443 Aplp2Q06335 707 aa14.53□□□□□ -0.08
Nup50-201ENSMUST00000165443 Hnrnpul2Q00PI9 745 aaKnown RBP14.51□□□□□ -0.09
Nup50-201ENSMUST00000165443 DaxxO35613 739 aa14.5□□□□□ -0.09
Nup50-201ENSMUST00000165443 Eid3Q3V124 375 aa14.48□□□□□ -0.09
Nup50-201ENSMUST00000165443 DiexfQ8BTT6 772 aaKnown RBP14.48□□□□□ -0.09
Nup50-201ENSMUST00000165443 Zbtb7cQ8VCZ7 619 aa14.46□□□□□ -0.09
Nup50-201ENSMUST00000165443 Chic1Q8CBW7 227 aa14.45□□□□□ -0.1
Nup50-201ENSMUST00000165443 Nlrp6Q91WS2 869 aa14.43□□□□□ -0.1
Nup50-201ENSMUST00000165443 Upf2A2AT37 1269 aaKnown RBP14.42□□□□□ -0.1
Nup50-201ENSMUST00000165443 Csrnp3P59055 597 aa14.38□□□□□ -0.11
Nup50-201ENSMUST00000165443 Mapk8ip2Q9ERE9 830 aa14.38□□□□□ -0.11
Nup50-201ENSMUST00000165443 Calr4Q3TQS0 420 aa14.36□□□□□ -0.11
Nup50-201ENSMUST00000165443 Cecr2E9Q2Z1 1453 aa14.32□□□□□ -0.12
Nup50-201ENSMUST00000165443 Gm13697A2AK42 830 aa14.32□□□□□ -0.12
Nup50-201ENSMUST00000165443 Erich6D3Z6S9 713 aa14.32□□□□□ -0.12
Nup50-201ENSMUST00000165443 Zbtb4Q5F293 982 aa14.31□□□□□ -0.12
Nup50-201ENSMUST00000165443 BicraF8VPZ9 1578 aa14.29□□□□□ -0.12
Nup50-201ENSMUST00000165443 Ppp4r2Q0VGB7 417 aa14.26□□□□□ -0.13
Nup50-201ENSMUST00000165443 Polr3glQ8R0C0 218 aa14.26□□□□□ -0.13
Nup50-201ENSMUST00000165443 Wdr43Q6ZQL4 677 aaKnown RBP14.25□□□□□ -0.13
Nup50-201ENSMUST00000165443 Ccdc9Q8VC31 543 aaKnown RBP14.25□□□□□ -0.13
Nup50-201ENSMUST00000165443 Clstn2Q9ER65 966 aa14.25□□□□□ -0.13
Nup50-201ENSMUST00000165443 Gm38655A0A286YDK6 273 aa14.24□□□□□ -0.13
Nup50-201ENSMUST00000165443 Mrs2Q5NCE8 434 aa14.24□□□□□ -0.13
Nup50-201ENSMUST00000165443 Atp1b4Q99ME6 356 aa14.24□□□□□ -0.13
Nup50-201ENSMUST00000165443 Golga3P55937 1487 aa14.23□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms