RNA–Protein interactions for RNA: ENSMUST00000162439.7

Shox2-204, Transcript of Short stature homeobox protein 2, mousemouse

TSL 1 (best) BASIC

Gene Shox2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-204ENSMUST00000162439 Cops9Q3U898 57 aa12.16□□□□□ -0.46
Shox2-204ENSMUST00000162439 Hist3h2bbQ8CGP0 126 aa12.16□□□□□ -0.46
Shox2-204ENSMUST00000162439 Hist3h2baQ9D2U9 126 aa12.16□□□□□ -0.46
Shox2-204ENSMUST00000162439 Dpm2Q9Z324 84 aa12.16□□□□□ -0.46
Shox2-204ENSMUST00000162439 A0A286YE02 88 aa12.15□□□□□ -0.46
Shox2-204ENSMUST00000162439 Vpreb3D3Z6J4 130 aa12.15□□□□□ -0.46
Shox2-204ENSMUST00000162439 Hint1P70349 126 aaKnown RBP12.15□□□□□ -0.46
Shox2-204ENSMUST00000162439 Hist2h2beQ64524 126 aa12.15□□□□□ -0.46
Shox2-204ENSMUST00000162439 Gm10295Q8CCF3 114 aa12.15□□□□□ -0.46
Shox2-204ENSMUST00000162439 Trav4d-3A0A075B625 110 aa12.14□□□□□ -0.47
Shox2-204ENSMUST00000162439 Hist1h2bfP10853 126 aa12.14□□□□□ -0.47
Shox2-204ENSMUST00000162439 Hist1h2bbQ64475 126 aa12.14□□□□□ -0.47
Shox2-204ENSMUST00000162439 Hist1h2bkQ8CGP1 126 aaKnown RBP12.14□□□□□ -0.47
Shox2-204ENSMUST00000162439 Hist1h2bpQ8CGP2 126 aaKnown RBP12.14□□□□□ -0.47
Shox2-204ENSMUST00000162439 Gm5142Q8C5X9 133 aa12.13□□□□□ -0.47
Shox2-204ENSMUST00000162439 SnrpeP62305 92 aaKnown RBP12.12□□□□□ -0.47
Shox2-204ENSMUST00000162439 A830005F24RikQ8BRT5 167 aa12.11□□□□□ -0.47
Shox2-204ENSMUST00000162439 Gnb1lQ9EQ15 326 aa12.11□□□□□ -0.47
Shox2-204ENSMUST00000162439 Xlr5cQ9JJR2 179 aa12.11□□□□□ -0.47
Shox2-204ENSMUST00000162439 Hbb-bsA8DUK4 147 aa12.08□□□□□ -0.48
Shox2-204ENSMUST00000162439 Hbb-b1P02088 147 aa12.08□□□□□ -0.48
Shox2-204ENSMUST00000162439 Eif4ebp3Q80VV3 101 aa12.08□□□□□ -0.48
Shox2-204ENSMUST00000162439 Gm21886J3QJU9 214 aa12.07□□□□□ -0.48
Shox2-204ENSMUST00000162439 Sec61bQ9CQS8 96 aaKnown RBP12.07□□□□□ -0.48
Shox2-204ENSMUST00000162439 SelenowP63300 88 aa12.06□□□□□ -0.48
Shox2-204ENSMUST00000162439 Krtap15-1Q9QZU5 150 aa12.06□□□□□ -0.48
Shox2-204ENSMUST00000162439 BC107364E9Q5A2 140 aa12.05□□□□□ -0.48
Shox2-204ENSMUST00000162439 Ndufv3Q8BK30 104 aaKnown RBP12.05□□□□□ -0.48
Shox2-204ENSMUST00000162439 Trappc1Q5NCF2 145 aa12.04□□□□□ -0.48
Shox2-204ENSMUST00000162439 Gm11939A2A592 99 aa12.03□□□□□ -0.48
Shox2-204ENSMUST00000162439 Igkv3-4A0A140T8Q4 119 aa12.02□□□□□ -0.49
Shox2-204ENSMUST00000162439 Gm5868Q8BJG1 145 aa12.02□□□□□ -0.49
Shox2-204ENSMUST00000162439 Smim1P0C8K7 78 aa12□□□□□ -0.49
Shox2-204ENSMUST00000162439 Gm10061D3Z714 54 aa11.99□□□□□ -0.49
Shox2-204ENSMUST00000162439 Vmn1r197Q8R265 298 aa11.99□□□□□ -0.49
Shox2-204ENSMUST00000162439 Cend1Q9JKC6 149 aa11.99□□□□□ -0.49
Shox2-204ENSMUST00000162439 Ighv10-1A0A0B4J1J6 119 aa11.98□□□□□ -0.49
Shox2-204ENSMUST00000162439 Defb45Q3V490 66 aa11.98□□□□□ -0.49
Shox2-204ENSMUST00000162439 Dnal4Q9DCM4 105 aa11.98□□□□□ -0.49
Shox2-204ENSMUST00000162439 A730071L15RikQ8C4X0 137 aa11.96□□□□□ -0.49
Shox2-204ENSMUST00000162439 Q8BT88 171 aa11.95□□□□□ -0.5
Shox2-204ENSMUST00000162439 4930535I16RikQ9CUI2 172 aa11.95□□□□□ -0.5
Shox2-204ENSMUST00000162439 Gm10401E9Q3K6 71 aa11.93□□□□□ -0.5
Shox2-204ENSMUST00000162439 P0C913 63 aa11.92□□□□□ -0.5
Shox2-204ENSMUST00000162439 Gm16253D3Z167 63 aa11.91□□□□□ -0.5
Shox2-204ENSMUST00000162439 Igkv8-21A0A140T8P7 120 aa11.88□□□□□ -0.51
Shox2-204ENSMUST00000162439 Smim26Q3V460 107 aa11.88□□□□□ -0.51
Shox2-204ENSMUST00000162439 Gm37389A0A0A6YW05 95 aa11.87□□□□□ -0.51
Shox2-204ENSMUST00000162439 2310034C09RikQ9D746 214 aa11.87□□□□□ -0.51
Shox2-204ENSMUST00000162439 Rpl39lQ9CQD0 51 aa11.85□□□□□ -0.51
Shox2-204ENSMUST00000162439 Gm11569B1AQB1 180 aa11.84□□□□□ -0.51
Shox2-204ENSMUST00000162439 Krtap4-2B1AQ85 167 aa11.83□□□□□ -0.52
Shox2-204ENSMUST00000162439 H2al1nQ497L1 109 aa11.83□□□□□ -0.52
Shox2-204ENSMUST00000162439 1700018G05RikA0A1B0GSI2 66 aa11.82□□□□□ -0.52
Shox2-204ENSMUST00000162439 IqcjQ8BPW0 110 aa11.82□□□□□ -0.52
Shox2-204ENSMUST00000162439 Gm10318A0A1W2P728 225 aa11.8□□□□□ -0.52
Shox2-204ENSMUST00000162439 Krtap19-3Q925H6 87 aa11.8□□□□□ -0.52
Shox2-204ENSMUST00000162439 Vamp8O70404 101 aa11.79□□□□□ -0.52
Shox2-204ENSMUST00000162439 Krtap16-3Q8C1I6 86 aa11.79□□□□□ -0.52
Shox2-204ENSMUST00000162439 Igkv8-28A0A0G2JE47 121 aa11.78□□□□□ -0.52
Shox2-204ENSMUST00000162439 P06320 134 aa11.78□□□□□ -0.52
Shox2-204ENSMUST00000162439 Krtap19-1Q925H2 87 aa11.77□□□□□ -0.53
Shox2-204ENSMUST00000162439 Rab37Q9JKM7 223 aa11.77□□□□□ -0.53
Shox2-204ENSMUST00000162439 Igkv1-35A0A0G2JDE5 120 aa11.75□□□□□ -0.53
Shox2-204ENSMUST00000162439 Pam16Q9CQV1 125 aa11.75□□□□□ -0.53
Shox2-204ENSMUST00000162439 Uqcc3Q8K2T4 89 aa11.74□□□□□ -0.53
Shox2-204ENSMUST00000162439 Trav3-4A0A075B654 114 aa11.73□□□□□ -0.53
Shox2-204ENSMUST00000162439 Chchd10Q7TNL9 138 aa11.71□□□□□ -0.53
Shox2-204ENSMUST00000162439 Gemin7Q9CWY4 129 aa11.71□□□□□ -0.53
Shox2-204ENSMUST00000162439 Igkv2-109A0A075B5K6 120 aa11.7□□□□□ -0.54
Shox2-204ENSMUST00000162439 Rpl37Q9D823 97 aa11.7□□□□□ -0.54
Shox2-204ENSMUST00000162439 1700042G07RikB1AUF7 90 aa11.68□□□□□ -0.54
Shox2-204ENSMUST00000162439 Cited4Q9WUL8 182 aa11.68□□□□□ -0.54
Shox2-204ENSMUST00000162439 Gm16381A0A1Y7VKT9 73 aa11.66□□□□□ -0.54
Shox2-204ENSMUST00000162439 CckP09240 115 aa11.66□□□□□ -0.54
Shox2-204ENSMUST00000162439 S100a1P56565 94 aa11.65□□□□□ -0.54
Shox2-204ENSMUST00000162439 Tal2Q62282 108 aa11.65□□□□□ -0.54
Shox2-204ENSMUST00000162439 Gm26620Q9CY65 116 aa11.65□□□□□ -0.54
Shox2-204ENSMUST00000162439 SspoQ8CG65 4998 aa11.64□□□□□ -0.55
Shox2-204ENSMUST00000162439 Sigmar1O55242 223 aa11.63□□□□□ -0.55
Shox2-204ENSMUST00000162439 Cox6a2P43023 97 aa11.63□□□□□ -0.55
Shox2-204ENSMUST00000162439 1700020N15RikL7MTX3 112 aa11.6□□□□□ -0.55
Shox2-204ENSMUST00000162439 Krtap1-4Q3V2D6 188 aa11.6□□□□□ -0.55
Shox2-204ENSMUST00000162439 Ifitm6A0A1B0GS75 124 aa11.59□□□□□ -0.55
Shox2-204ENSMUST00000162439 Grcc10O35127 126 aa11.59□□□□□ -0.55
Shox2-204ENSMUST00000162439 G0s2Q61585 103 aa11.59□□□□□ -0.55
Shox2-204ENSMUST00000162439 Lce1gQ9D195 139 aa11.59□□□□□ -0.55
Shox2-204ENSMUST00000162439 9530003J23RikQ8BM26 151 aa11.58□□□□□ -0.56
Shox2-204ENSMUST00000162439 Cypt15B1AXS0 87 aa11.54□□□□□ -0.56
Shox2-204ENSMUST00000162439 Igkv8-30A0A140T8M3 121 aa11.52□□□□□ -0.57
Shox2-204ENSMUST00000162439 Sfta2E9PXB6 77 aa11.52□□□□□ -0.57
Shox2-204ENSMUST00000162439 Defb47Q30KN1 79 aa11.52□□□□□ -0.57
Shox2-204ENSMUST00000162439 Vps25Q9CQ80 176 aa11.51□□□□□ -0.57
Shox2-204ENSMUST00000162439 Ighv10-3A0A075B5T6 119 aa11.5□□□□□ -0.57
Shox2-204ENSMUST00000162439 Gm10308Q9CVR5 141 aa11.49□□□□□ -0.57
Shox2-204ENSMUST00000162439 Ctxnd2A0A1B0GQX3 59 aa11.44□□□□□ -0.58
Shox2-204ENSMUST00000162439 Syne2Q6ZWQ0 6874 aaKnown RBP11.43□□□□□ -0.58
Shox2-204ENSMUST00000162439 Gm29423A0A087WRM1 55 aa11.43□□□□□ -0.58
Shox2-204ENSMUST00000162439 Gm12353A2AGJ4 60 aa11.42□□□□□ -0.58
Shox2-204ENSMUST00000162439 P01843 105 aa11.42□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 135 ms