RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 B9d2Q3UK10 175 aa4.3□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 Defb29Q8BGW9 78 aa4.3□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 SptssbQ925E8 76 aa4.3□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 Xirp2Q4U4S6 3784 aa4.29□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 P01823 113 aa4.29□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 Rpl39lQ9CQD0 51 aa4.29□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 Cox7b2Q9D2H1 82 aa4.29□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 Pkd1l1Q8R526 2615 aa4.29□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 Tenm2Q9WTS5 2764 aa4.29□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 Hivep3A2A884 2348 aa4.29□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 P01738 130 aa4.29□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 Klk9Q32M27 251 aa4.29□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 Gm6040Q4QY32 63 aa4.29□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 Dmbt1Q60997 2085 aa4.28□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 Igkv4-74A0A0B4J1I3 119 aa4.28□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 Igkv4-69A0A0B4J1I6 116 aa4.28□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 Wfdc15aQ8BH89 80 aa4.28□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 Gm5142Q8C5X9 133 aa4.28□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 Plac8Q9JI48 112 aa4.28□□□□□ -1.72
Ccdc38-203ENSMUST00000132214 Igkv8-34A0A0G2JDU0 121 aa4.27□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Srrm2Q8BTI8 2703 aaKnown RBP4.27□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Ighv2-7A0A075B5Q8 116 aa4.27□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Trav9-2A0A075B647 113 aa4.27□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Gm12353A2AGJ4 60 aa4.27□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Igkv8-19A0A0G2JFN8 121 aa4.26□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 LhbO09108 141 aa4.26□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Ighv8-13A0A075B5Y0 101 aa4.26□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Trav9n-2A0A0G2JDP3 113 aa4.26□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Krtap26-1Q9D7N2 215 aa4.26□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Mapk1ip1lQ8BH93 242 aa4.25□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Tenm1Q9WTS4 2731 aa4.25□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Igkv8-24A0A140T8P5 121 aa4.25□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Igkv3-4A0A140T8Q4 119 aa4.24□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Gm8439G3UWA7 96 aa4.24□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Rnase1P00683 149 aa4.24□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Higd2aQ9CQJ1 106 aa4.24□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 1700012A03RikQ9DAF1 130 aa4.24□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 PtprqP0C5E4 2300 aa4.24□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Igkv1-99F6XWB2 120 aa4.23□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Cox17P56394 63 aa4.23□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Reg3dQ9QUS9 175 aa4.23□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Krtap24-1G3X9A2 248 aa4.23□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Reg3gO09049 174 aa4.23□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Pla2g10Q9QXX3 151 aa4.23□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Gm4707V9GXN5 68 aa4.23□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 ApcQ61315 2845 aa4.22□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Igkv4-62A0A0G2JDW9 117 aa4.22□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Spink4O35679 86 aa4.22□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Chchd10Q7TNL9 138 aa4.22□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Lce1dQ9D731 133 aa4.22□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Igkv1-88A0A140T8N1 120 aa4.22□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Reg3aO09037 175 aa4.22□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Spag11Q8K4N2 71 aa4.22□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Brwd1Q921C3 2304 aa4.21□□□□□ -1.73
Ccdc38-203ENSMUST00000132214 Prr15lQ8JZM2 100 aa4.21□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 FasnP19096 2504 aaKnown RBP4.2□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Hspg2Q05793 3707 aaKnown RBP4.2□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 D730001G18RikA0A087WQU7 115 aa4.2□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Gm3443F7CCV5 94 aa4.2□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Igkv3-5A0A140T8M6 119 aa4.19□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Gm9513B3GLJ6 99 aa4.19□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Muc6Q80T03 2850 aa4.19□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 A0A286YCN5 57 aa4.18□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Sprr2jO70561 109 aa4.18□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Rnase13Q5GAM7 153 aa4.18□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Gm10509O88255 85 aa4.18□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Gm7276Q3TYW4 209 aa4.18□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Lypd5Q9D7Z7 256 aa4.18□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Notch3Q61982 2318 aa4.17□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Klk12B2RVZ0 247 aa4.17□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Gm10490F6VBM2 120 aa4.17□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 OdaphJ3QNT8 126 aa4.17□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Tnp2P11378 117 aa4.17□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Romo1P60603 79 aa4.17□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Defb50Q6TU36 73 aa4.17□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Defb12Q8K4N3 78 aa4.17□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Notch1Q01705 2531 aa4.17□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Igkv4-91A0A075B5L2 119 aa4.15□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 PrlhG3UWC3 86 aa4.15□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 VwfQ8CIZ8 2813 aa4.15□□□□□ -1.74
Ccdc38-203ENSMUST00000132214 Igkv4-68A0A0B4J1I7 117 aa4.15□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Igkv8-28A0A0G2JE47 121 aa4.15□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Gm21886J3QJU9 214 aa4.15□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Uqcr11Q9CPX8 56 aa4.15□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Zfand2aQ9JII7 171 aa4.15□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Igkv4-78A0A0A6YYE5 119 aa4.14□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Igkv1-122A0A140T8M9 119 aa4.14□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Gm37013Q8K491 104 aa4.14□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Gm10542F6XDR3 90 aa4.14□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Tfpi2O35536 230 aa4.14□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Gm20661K7N787 53 aa4.13□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Dnah6E9Q0B6 4144 aa4.12□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Cox7bP56393 80 aa4.12□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Cmc4Q61908 68 aa4.12□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Defb42Q8BVB5 75 aa4.12□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Igkv4-79A0A075B5L8 119 aa4.11□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Gm9736A0A1W2P7N1 277 aa4.11□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Gm17349F7BGH6 99 aa4.11□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Q99M08 65 aa4.11□□□□□ -1.75
Ccdc38-203ENSMUST00000132214 Tcl1b5P56845 121 aa4.1□□□□□ -1.75
Retrieved 100 of 22,080 RNA–protein pairs in 65.8 ms