RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Dnah7cA0A087WR13 4024 aa16,06■□□□□ 0,16
Tpm1-216ENSMUST00000113707 Gm10401E9Q3K6 71 aa16,05■□□□□ 0,16
Tpm1-216ENSMUST00000113707 P06320 134 aa16,05■□□□□ 0,16
Tpm1-216ENSMUST00000113707 Igkv8-21A0A140T8P7 120 aa16,05■□□□□ 0,16
Tpm1-216ENSMUST00000113707 Gm10139O88245 57 aa16,05■□□□□ 0,16
Tpm1-216ENSMUST00000113707 Sprr2jO70561 109 aa16,03■□□□□ 0,16
Tpm1-216ENSMUST00000113707 Ubl5Q9EPV8 73 aa16,03■□□□□ 0,16
Tpm1-216ENSMUST00000113707 Defa28D3Z1V9 94 aa16,03■□□□□ 0,16
Tpm1-216ENSMUST00000113707 Q8K1L6 76 aa16,03■□□□□ 0,16
Tpm1-216ENSMUST00000113707 4930535I16RikQ9CUI2 172 aa16,03■□□□□ 0,16
Tpm1-216ENSMUST00000113707 6030445D17RikE9Q8F9 148 aa16,02■□□□□ 0,16
Tpm1-216ENSMUST00000113707 Tmem254aP0DN89 123 aa15,99■□□□□ 0,15
Tpm1-216ENSMUST00000113707 Tmem254bP0DN90 123 aa15,99■□□□□ 0,15
Tpm1-216ENSMUST00000113707 Tmem254cP0DN91 123 aa15,99■□□□□ 0,15
Tpm1-216ENSMUST00000113707 Ube2aQ9Z255 152 aa15,99■□□□□ 0,15
Tpm1-216ENSMUST00000113707 Gm12353A2AGJ4 60 aa15,95■□□□□ 0,14
Tpm1-216ENSMUST00000113707 Krtap10-4Q08EG8 221 aa15,95■□□□□ 0,14
Tpm1-216ENSMUST00000113707 Gm27235Q3UW50 83 aa15,94■□□□□ 0,14
Tpm1-216ENSMUST00000113707 Gpr15lA0A0B4J1N3 78 aa15,93■□□□□ 0,14
Tpm1-216ENSMUST00000113707 1600014C23RikQ9DAX4 101 aa15,92■□□□□ 0,14
Tpm1-216ENSMUST00000113707 MplkipQ9D011 178 aa15,91■□□□□ 0,14
Tpm1-216ENSMUST00000113707 NbdyA0A0N4SUI7 68 aa15,91■□□□□ 0,14
Tpm1-216ENSMUST00000113707 Gm10570F6VB42 170 aa15,9■□□□□ 0,14
Tpm1-216ENSMUST00000113707 Wfdc13Q5DQQ6 81 aa15,9■□□□□ 0,14
Tpm1-216ENSMUST00000113707 Gm10642Q3TWM1 71 aa15,88■□□□□ 0,13
Tpm1-216ENSMUST00000113707 Adm2Q7TNK8 150 aa15,87■□□□□ 0,13
Tpm1-216ENSMUST00000113707 A330070K13RikQ8CA53 115 aa15,87■□□□□ 0,13
Tpm1-216ENSMUST00000113707 Vps13dB1ART2 4390 aa15,87■□□□□ 0,13
Tpm1-216ENSMUST00000113707 Igkv1-110A0A0B4J1I0 119 aa15,85■□□□□ 0,13
Tpm1-216ENSMUST00000113707 Igf1P05017 153 aa15,84■□□□□ 0,13
Tpm1-216ENSMUST00000113707 Igkv3-5A0A140T8M6 119 aa15,82■□□□□ 0,12
Tpm1-216ENSMUST00000113707 1700018G05RikA0A1B0GSI2 66 aa15,82■□□□□ 0,12
Tpm1-216ENSMUST00000113707 ScxQ64124 207 aa15,82■□□□□ 0,12
Tpm1-216ENSMUST00000113707 Dnah2P0C6F1 4456 aa15,81■□□□□ 0,12
Tpm1-216ENSMUST00000113707 Igkv3-7A0A0G2JE31 119 aa15,81■□□□□ 0,12
Tpm1-216ENSMUST00000113707 Chchd10Q7TNL9 138 aa15,8■□□□□ 0,12
Tpm1-216ENSMUST00000113707 Odf3bQ5M8M2 238 aa15,79■□□□□ 0,12
Tpm1-216ENSMUST00000113707 Igkv3-4A0A140T8Q4 119 aa15,78■□□□□ 0,12
Tpm1-216ENSMUST00000113707 Hist1h4aP62806 103 aaKnown RBP15,78■□□□□ 0,12
Tpm1-216ENSMUST00000113707 Fam19a3Q7TPG6 132 aa15,78■□□□□ 0,12
Tpm1-216ENSMUST00000113707 Q8BT88 171 aa15,78■□□□□ 0,12
Tpm1-216ENSMUST00000113707 Gm17689B3GLJ4 109 aa15,77■□□□□ 0,11
Tpm1-216ENSMUST00000113707 D130052B06RikQ3UW13 202 aa15,77■□□□□ 0,11
Tpm1-216ENSMUST00000113707 Tnp2P11378 117 aa15,76■□□□□ 0,11
Tpm1-216ENSMUST00000113707 Gm37013Q8K491 104 aa15,74■□□□□ 0,11
Tpm1-216ENSMUST00000113707 Mrpl34Q99N91 92 aa15,72■□□□□ 0,11
Tpm1-216ENSMUST00000113707 C130032M10RikQ8C888 123 aa15,71■□□□□ 0,11
Tpm1-216ENSMUST00000113707 Dnah5Q8VHE6 4621 aa15,71■□□□□ 0,11
Tpm1-216ENSMUST00000113707 Gm44790A0A0N4SV91 103 aa15,7■□□□□ 0,1
Tpm1-216ENSMUST00000113707 HrnrQ8VHD8 2496 aa15,7■□□□□ 0,1
Tpm1-216ENSMUST00000113707 Gm28374F6SG70 93 aa15,67■□□□□ 0,1
Tpm1-216ENSMUST00000113707 Krtap14O08640 167 aa15,67■□□□□ 0,1
Tpm1-216ENSMUST00000113707 Znf706Q9D115 76 aaKnown RBP15,67■□□□□ 0,1
Tpm1-216ENSMUST00000113707 Gm28230A0A0A0MQ91 144 aa15,67■□□□□ 0,1
Tpm1-216ENSMUST00000113707 Ccdc179J3QM76 67 aa15,67■□□□□ 0,1
Tpm1-216ENSMUST00000113707 Cystm1Q8K353 104 aa15,67■□□□□ 0,1
Tpm1-216ENSMUST00000113707 Gm20726G3UX18 150 aa15,65■□□□□ 0,1
Tpm1-216ENSMUST00000113707 Igkv3-10A0A0G2JGN0 119 aa15,65■□□□□ 0,1
Tpm1-216ENSMUST00000113707 Krtap13O88375 197 aa15,65■□□□□ 0,1
Tpm1-216ENSMUST00000113707 UqcrqQ9CQ69 82 aa15,65■□□□□ 0,1
Tpm1-216ENSMUST00000113707 Pkd1O08852 4293 aa15,64■□□□□ 0,09
Tpm1-216ENSMUST00000113707 Defb39Q70KL3 74 aa15,62■□□□□ 0,09
Tpm1-216ENSMUST00000113707 Gm21886J3QJU9 214 aa15,57■□□□□ 0,08
Tpm1-216ENSMUST00000113707 Gm2696A0A1W2P709 240 aa15,55■□□□□ 0,08
Tpm1-216ENSMUST00000113707 Cypt14J3QPF7 87 aa15,54■□□□□ 0,08
Tpm1-216ENSMUST00000113707 Defa25Q5G864 92 aa15,53■□□□□ 0,08
Tpm1-216ENSMUST00000113707 Ndufc1Q9CQY9 76 aa15,53■□□□□ 0,08
Tpm1-216ENSMUST00000113707 Krtap10-10A0A1W2P7T6 217 aa15,52■□□□□ 0,08
Tpm1-216ENSMUST00000113707 7530416G11RikJ3QJX6 159 aa15,52■□□□□ 0,08
Tpm1-216ENSMUST00000113707 ApobE9Q414 4505 aa15,52■□□□□ 0,08
Tpm1-216ENSMUST00000113707 Gm20604F8WIA3 75 aa15,51■□□□□ 0,07
Tpm1-216ENSMUST00000113707 Rpl37aP61514 92 aa15,5■□□□□ 0,07
Tpm1-216ENSMUST00000113707 Wfdc3Q14AE4 130 aa15,49■□□□□ 0,07
Tpm1-216ENSMUST00000113707 Fam229bQ8CF36 80 aa15,48■□□□□ 0,07
Tpm1-216ENSMUST00000113707 Bean1Q9EQG5 255 aa15,48■□□□□ 0,07
Tpm1-216ENSMUST00000113707 Igkv8-19A0A0G2JFN8 121 aa15,46■□□□□ 0,07
Tpm1-216ENSMUST00000113707 Prr13Q9CQJ5 137 aa15,46■□□□□ 0,06
Tpm1-216ENSMUST00000113707 Anapc11Q9CPX9 84 aa15,45■□□□□ 0,06
Tpm1-216ENSMUST00000113707 Serp2Q6TAW2 65 aa15,44■□□□□ 0,06
Tpm1-216ENSMUST00000113707 Prr15lQ8JZM2 100 aa15,44■□□□□ 0,06
Tpm1-216ENSMUST00000113707 4930518I15RikQ3V2W7 57 aa15,42■□□□□ 0,06
Tpm1-216ENSMUST00000113707 Naa38Q9D2U5 125 aa15,4■□□□□ 0,06
Tpm1-216ENSMUST00000113707 Dync1h1Q9JHU4 4644 aaKnown RBP15,39■□□□□ 0,05
Tpm1-216ENSMUST00000113707 Apoc4Q61268 124 aa15,37■□□□□ 0,05
Tpm1-216ENSMUST00000113707 Reg3aO09037 175 aa15,36■□□□□ 0,05
Tpm1-216ENSMUST00000113707 Hectd4E9Q2E4 4418 aa15,33■□□□□ 0,04
Tpm1-216ENSMUST00000113707 Fat1A0A1L1SQU7 4645 aa15,28■□□□□ 0,04
Tpm1-216ENSMUST00000113707 Gm16253D3Z167 63 aa15,27■□□□□ 0,04
Tpm1-216ENSMUST00000113707 GhrhP16043 103 aa15,27■□□□□ 0,03
Tpm1-216ENSMUST00000113707 Spink8Q09TK9 105 aa15,22■□□□□ 0,03
Tpm1-216ENSMUST00000113707 Lrp1bQ9JI18 4599 aa15,21■□□□□ 0,03
Tpm1-216ENSMUST00000113707 Stard9Q80TF6 4561 aa15,2■□□□□ 0,02
Tpm1-216ENSMUST00000113707 Pkhd1E9PZ36 4059 aa15,18■□□□□ 0,02
Tpm1-216ENSMUST00000113707 Samd13D3YUG0 102 aa15,18■□□□□ 0,02
Tpm1-216ENSMUST00000113707 Defa21Q8C1P2 93 aa15,17■□□□□ 0,02
Tpm1-216ENSMUST00000113707 Ryr3A2AGL3 4863 aa15,16■□□□□ 0,02
Tpm1-216ENSMUST00000113707 Gm2310J3QNJ2 377 aa15,16■□□□□ 0,02
Tpm1-216ENSMUST00000113707 B230307C23RikQ8BLB2 64 aa15,15■□□□□ 0,02
Tpm1-216ENSMUST00000113707 Mrpl55Q9CZ83 127 aa15,14■□□□□ 0,01
Tpm1-216ENSMUST00000113707 A0A286YE49 62 aa15,12■□□□□ 0,01
Retrieved 100 of 22,080 RNA–protein pairs in 36,9 ms