RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 Cep350E9Q309 3095 aa8.9□□□□□ -0.99
Shroom3-202ENSMUST00000113054 HrnrQ8VHD8 2496 aa8.89□□□□□ -0.99
Shroom3-202ENSMUST00000113054 Odf3bQ5M8M2 238 aa8.89□□□□□ -0.99
Shroom3-202ENSMUST00000113054 FlnaQ8BTM8 2647 aaKnown RBP8.87□□□□□ -0.99
Shroom3-202ENSMUST00000113054 Fn1P11276 2477 aaKnown RBP8.83□□□□□ -1
Shroom3-202ENSMUST00000113054 Gm10139O88245 57 aa8.82□□□□□ -1
Shroom3-202ENSMUST00000113054 Krtap10-4Q08EG8 221 aa8.82□□□□□ -1
Shroom3-202ENSMUST00000113054 Gm10643Q3URG9 111 aa8.8□□□□□ -1
Shroom3-202ENSMUST00000113054 Gm9195A0A140LHT4 2805 aa8.8□□□□□ -1
Shroom3-202ENSMUST00000113054 Krtap13O88375 197 aa8.79□□□□□ -1
Shroom3-202ENSMUST00000113054 Gcn1E9PVA8 2671 aaKnown RBP8.76□□□□□ -1.01
Shroom3-202ENSMUST00000113054 Sec61bQ9CQS8 96 aaKnown RBP8.74□□□□□ -1.01
Shroom3-202ENSMUST00000113054 Sprr1aQ62266 144 aa8.74□□□□□ -1.01
Shroom3-202ENSMUST00000113054 Gm37013Q8K491 104 aa8.72□□□□□ -1.01
Shroom3-202ENSMUST00000113054 Krtap10-10A0A1W2P7T6 217 aa8.71□□□□□ -1.02
Shroom3-202ENSMUST00000113054 Col12a1Q60847 3120 aa8.71□□□□□ -1.02
Shroom3-202ENSMUST00000113054 Hectd1Q69ZR2 2618 aaKnown RBP8.7□□□□□ -1.02
Shroom3-202ENSMUST00000113054 Cystm1Q8K353 104 aa8.68□□□□□ -1.02
Shroom3-202ENSMUST00000113054 Gm11565A2A4M7 156 aa8.67□□□□□ -1.02
Shroom3-202ENSMUST00000113054 Gm5767A0A0J9YTU8 78 aa8.67□□□□□ -1.02
Shroom3-202ENSMUST00000113054 Gm19426M0QWC7 77 aa8.65□□□□□ -1.02
Shroom3-202ENSMUST00000113054 Usp34Q6ZQ93 3582 aa8.64□□□□□ -1.03
Shroom3-202ENSMUST00000113054 2310050C09RikG5E8Z3 280 aa8.63□□□□□ -1.03
Shroom3-202ENSMUST00000113054 Gm16253D3Z167 63 aa8.63□□□□□ -1.03
Shroom3-202ENSMUST00000113054 Akap13E9Q394 2776 aa8.62□□□□□ -1.03
Shroom3-202ENSMUST00000113054 Krtap29-1A2A5X4 342 aa8.62□□□□□ -1.03
Shroom3-202ENSMUST00000113054 Prrc2cQ3TLH4 2846 aaKnown RBP8.61□□□□□ -1.03
Shroom3-202ENSMUST00000113054 Notch1Q01705 2531 aa8.6□□□□□ -1.03
Shroom3-202ENSMUST00000113054 Stab1Q8R4Y4 2571 aa8.6□□□□□ -1.03
Shroom3-202ENSMUST00000113054 Mki67E9PVX6 3177 aaKnown RBP8.56□□□□□ -1.04
Shroom3-202ENSMUST00000113054 HttP42859 3119 aa8.56□□□□□ -1.04
Shroom3-202ENSMUST00000113054 Gm7173A0A0G2JEB6 3132 aa8.54□□□□□ -1.04
Shroom3-202ENSMUST00000113054 A730071L15RikQ8C4X0 137 aa8.53□□□□□ -1.04
Shroom3-202ENSMUST00000113054 BC029722A0A0N4SW31 51 aa8.51□□□□□ -1.05
Shroom3-202ENSMUST00000113054 Ranbp2Q9ERU9 3053 aaKnown RBP8.5□□□□□ -1.05
Shroom3-202ENSMUST00000113054 Lama2Q60675 3118 aaKnown RBP8.5□□□□□ -1.05
Shroom3-202ENSMUST00000113054 Rev3lQ61493 3122 aa8.49□□□□□ -1.05
Shroom3-202ENSMUST00000113054 Rpl37Q9D823 97 aa8.49□□□□□ -1.05
Shroom3-202ENSMUST00000113054 MgaA2AWL7 3003 aaKnown RBP8.46□□□□□ -1.05
Shroom3-202ENSMUST00000113054 Romo1P60603 79 aa8.45□□□□□ -1.06
Shroom3-202ENSMUST00000113054 Mast4Q811L6 2618 aa8.45□□□□□ -1.06
Shroom3-202ENSMUST00000113054 Gm3646F6S692 53 aa8.45□□□□□ -1.06
Shroom3-202ENSMUST00000113054 Gm2696A0A1W2P709 240 aa8.44□□□□□ -1.06
Shroom3-202ENSMUST00000113054 Igsf10Q3V1M1 2594 aa8.44□□□□□ -1.06
Shroom3-202ENSMUST00000113054 Itpr3P70227 2670 aa8.43□□□□□ -1.06
Shroom3-202ENSMUST00000113054 Krtap14O08640 167 aa8.42□□□□□ -1.06
Shroom3-202ENSMUST00000113054 Dmxl1Q6PNC0 3013 aa8.41□□□□□ -1.06
Shroom3-202ENSMUST00000113054 Ash1lQ99MY8 2958 aa8.41□□□□□ -1.06
Shroom3-202ENSMUST00000113054 Gm10382Q3V0T5 144 aa8.4□□□□□ -1.07
Shroom3-202ENSMUST00000113054 Cdh23Q99PF4 3354 aa8.39□□□□□ -1.07
Shroom3-202ENSMUST00000113054 Ubr5Q80TP3 2792 aa8.37□□□□□ -1.07
Shroom3-202ENSMUST00000113054 Map1aQ9QYR6 2776 aa8.36□□□□□ -1.07
Shroom3-202ENSMUST00000113054 Tnp2P11378 117 aa8.36□□□□□ -1.07
Shroom3-202ENSMUST00000113054 Kmt2bO08550 2713 aa8.34□□□□□ -1.07
Shroom3-202ENSMUST00000113054 9530053A07RikE9PVG8 2581 aa8.34□□□□□ -1.07
Shroom3-202ENSMUST00000113054 Nbeal2Q6ZQA0 2742 aa8.34□□□□□ -1.07
Shroom3-202ENSMUST00000113054 BptfA2A654 3036 aaKnown RBP8.33□□□□□ -1.08
Shroom3-202ENSMUST00000113054 Itpr1P11881 2749 aa8.3□□□□□ -1.08
Shroom3-202ENSMUST00000113054 Chd7A2AJK6 2986 aaKnown RBP8.28□□□□□ -1.08
Shroom3-202ENSMUST00000113054 2310061N02RikQ9D6S9 174 aa8.28□□□□□ -1.08
Shroom3-202ENSMUST00000113054 Fbn2Q61555 2907 aa8.26□□□□□ -1.09
Shroom3-202ENSMUST00000113054 Tep1P97499 2629 aa8.25□□□□□ -1.09
Shroom3-202ENSMUST00000113054 AtmQ62388 3066 aa8.25□□□□□ -1.09
Shroom3-202ENSMUST00000113054 2310057N15RikQ9D6T8 200 aa8.25□□□□□ -1.09
Shroom3-202ENSMUST00000113054 NipblQ6KCD5 2798 aaKnown RBP8.25□□□□□ -1.09
Shroom3-202ENSMUST00000113054 Cfap54Q8C6S9 3106 aa8.24□□□□□ -1.09
Shroom3-202ENSMUST00000113054 Chd6A3KFM7 2711 aa8.19□□□□□ -1.1
Shroom3-202ENSMUST00000113054 Celsr3Q91ZI0 3301 aa8.17□□□□□ -1.1
Shroom3-202ENSMUST00000113054 KalrnA2CG49 2964 aa8.17□□□□□ -1.1
Shroom3-202ENSMUST00000113054 Celsr1O35161 3034 aa8.17□□□□□ -1.1
Shroom3-202ENSMUST00000113054 Unc80Q8BLN6 3261 aa8.17□□□□□ -1.1
Shroom3-202ENSMUST00000113054 Vps13aQ5H8C4 3166 aa8.16□□□□□ -1.1
Shroom3-202ENSMUST00000113054 Myo15bI7HPW8 3033 aa8.15□□□□□ -1.11
Shroom3-202ENSMUST00000113054 Frem2Q6NVD0 3160 aa8.13□□□□□ -1.11
Shroom3-202ENSMUST00000113054 Gm5965D3Z724 196 aa8.12□□□□□ -1.11
Shroom3-202ENSMUST00000113054 Gm2310J3QNJ2 377 aa8.12□□□□□ -1.11
Shroom3-202ENSMUST00000113054 Zfhx3Q61329 3726 aa8.1□□□□□ -1.11
Shroom3-202ENSMUST00000113054 Pkd1l1Q8R526 2615 aa8.09□□□□□ -1.11
Shroom3-202ENSMUST00000113054 Tnrc18Q80WC3 2878 aa8.07□□□□□ -1.12
Shroom3-202ENSMUST00000113054 Stab2Q8R4U0 2559 aa8.07□□□□□ -1.12
Shroom3-202ENSMUST00000113054 Szt2A2A9C3 3431 aa8.07□□□□□ -1.12
Shroom3-202ENSMUST00000113054 AspmQ8CJ27 3122 aa8.07□□□□□ -1.12
Shroom3-202ENSMUST00000113054 Gm21887J3QQ04 176 aa8.05□□□□□ -1.12
Shroom3-202ENSMUST00000113054 4933415A04RikQ9D443 101 aa8.05□□□□□ -1.12
Shroom3-202ENSMUST00000113054 Cox6b2Q80ZN9 88 aa8.04□□□□□ -1.12
Shroom3-202ENSMUST00000113054 Rps29P62274 56 aa8.02□□□□□ -1.13
Shroom3-202ENSMUST00000113054 Brca2P97929 3329 aa7.96□□□□□ -1.14
Shroom3-202ENSMUST00000113054 1700042G07RikB1AUF7 90 aa7.96□□□□□ -1.14
Shroom3-202ENSMUST00000113054 D6Ertd527eA0A0N4SWI3 464 aa7.95□□□□□ -1.14
Shroom3-202ENSMUST00000113054 Lrrc37aB1AWG4 3215 aa7.95□□□□□ -1.14
Shroom3-202ENSMUST00000113054 Col6a5A6H584 2640 aa7.94□□□□□ -1.14
Shroom3-202ENSMUST00000113054 Muc2Q80Z19 2680 aa7.93□□□□□ -1.14
Shroom3-202ENSMUST00000113054 Itpr2Q9Z329 2701 aa7.92□□□□□ -1.14
Shroom3-202ENSMUST00000113054 Lama1P19137 3084 aa7.92□□□□□ -1.14
Shroom3-202ENSMUST00000113054 FryE9Q8I9 3020 aa7.87□□□□□ -1.15
Shroom3-202ENSMUST00000113054 Igfn1Q3KNY0 2849 aa7.86□□□□□ -1.15
Shroom3-202ENSMUST00000113054 Col6a3E9PWQ3 3284 aa7.85□□□□□ -1.15
Shroom3-202ENSMUST00000113054 Adgrg4B7ZCC9 3073 aa7.85□□□□□ -1.15
Shroom3-202ENSMUST00000113054 Hivep1Q03172 2688 aa7.84□□□□□ -1.15
Shroom3-202ENSMUST00000113054 Utp20Q5XG71 2788 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms