RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 FasnP19096 2504 aaKnown RBP10.24□□□□□ -0.77
Shroom3-201ENSMUST00000113051 Krtap10-4Q08EG8 221 aa10.24□□□□□ -0.77
Shroom3-201ENSMUST00000113051 Odf3bQ5M8M2 238 aa10.23□□□□□ -0.77
Shroom3-201ENSMUST00000113051 PcntP48725 2898 aa10.22□□□□□ -0.77
Shroom3-201ENSMUST00000113051 Krtap13O88375 197 aa10.16□□□□□ -0.78
Shroom3-201ENSMUST00000113051 Gm10139O88245 57 aa10.15□□□□□ -0.79
Shroom3-201ENSMUST00000113051 Usp34Q6ZQ93 3582 aa10.15□□□□□ -0.79
Shroom3-201ENSMUST00000113051 Krtap10-10A0A1W2P7T6 217 aa10.12□□□□□ -0.79
Shroom3-201ENSMUST00000113051 FlnaQ8BTM8 2647 aaKnown RBP10.11□□□□□ -0.79
Shroom3-201ENSMUST00000113051 HrnrQ8VHD8 2496 aa10.1□□□□□ -0.79
Shroom3-201ENSMUST00000113051 Col12a1Q60847 3120 aa10.09□□□□□ -0.79
Shroom3-201ENSMUST00000113051 Gm9195A0A140LHT4 2805 aa10.09□□□□□ -0.79
Shroom3-201ENSMUST00000113051 Sec61bQ9CQS8 96 aaKnown RBP10.09□□□□□ -0.79
Shroom3-201ENSMUST00000113051 Sprr1aQ62266 144 aa10.04□□□□□ -0.8
Shroom3-201ENSMUST00000113051 Gm37013Q8K491 104 aa10.03□□□□□ -0.8
Shroom3-201ENSMUST00000113051 Fn1P11276 2477 aaKnown RBP10.01□□□□□ -0.81
Shroom3-201ENSMUST00000113051 Gm5767A0A0J9YTU8 78 aa10.01□□□□□ -0.81
Shroom3-201ENSMUST00000113051 Gm11565A2A4M7 156 aa10□□□□□ -0.81
Shroom3-201ENSMUST00000113051 Gm19426M0QWC7 77 aa10□□□□□ -0.81
Shroom3-201ENSMUST00000113051 Gcn1E9PVA8 2671 aaKnown RBP9.98□□□□□ -0.81
Shroom3-201ENSMUST00000113051 2310050C09RikG5E8Z3 280 aa9.95□□□□□ -0.82
Shroom3-201ENSMUST00000113051 Cystm1Q8K353 104 aa9.95□□□□□ -0.82
Shroom3-201ENSMUST00000113051 Krtap29-1A2A5X4 342 aa9.94□□□□□ -0.82
Shroom3-201ENSMUST00000113051 Hectd1Q69ZR2 2618 aaKnown RBP9.91□□□□□ -0.82
Shroom3-201ENSMUST00000113051 Gm16253D3Z167 63 aa9.9□□□□□ -0.82
Shroom3-201ENSMUST00000113051 HttP42859 3119 aa9.9□□□□□ -0.83
Shroom3-201ENSMUST00000113051 Mki67E9PVX6 3177 aaKnown RBP9.88□□□□□ -0.83
Shroom3-201ENSMUST00000113051 Rev3lQ61493 3122 aa9.84□□□□□ -0.83
Shroom3-201ENSMUST00000113051 Notch1Q01705 2531 aa9.84□□□□□ -0.83
Shroom3-201ENSMUST00000113051 Ranbp2Q9ERU9 3053 aaKnown RBP9.84□□□□□ -0.83
Shroom3-201ENSMUST00000113051 Gm7173A0A0G2JEB6 3132 aa9.83□□□□□ -0.84
Shroom3-201ENSMUST00000113051 Prrc2cQ3TLH4 2846 aaKnown RBP9.82□□□□□ -0.84
Shroom3-201ENSMUST00000113051 Cdh23Q99PF4 3354 aa9.81□□□□□ -0.84
Shroom3-201ENSMUST00000113051 Gm2696A0A1W2P709 240 aa9.8□□□□□ -0.84
Shroom3-201ENSMUST00000113051 BC029722A0A0N4SW31 51 aa9.79□□□□□ -0.84
Shroom3-201ENSMUST00000113051 Lama2Q60675 3118 aaKnown RBP9.77□□□□□ -0.84
Shroom3-201ENSMUST00000113051 Stab1Q8R4Y4 2571 aa9.77□□□□□ -0.84
Shroom3-201ENSMUST00000113051 A730071L15RikQ8C4X0 137 aa9.77□□□□□ -0.85
Shroom3-201ENSMUST00000113051 Akap13E9Q394 2776 aa9.75□□□□□ -0.85
Shroom3-201ENSMUST00000113051 Rpl37Q9D823 97 aa9.74□□□□□ -0.85
Shroom3-201ENSMUST00000113051 Romo1P60603 79 aa9.71□□□□□ -0.85
Shroom3-201ENSMUST00000113051 Tnp2P11378 117 aa9.71□□□□□ -0.85
Shroom3-201ENSMUST00000113051 MgaA2AWL7 3003 aaKnown RBP9.71□□□□□ -0.85
Shroom3-201ENSMUST00000113051 Krtap14O08640 167 aa9.71□□□□□ -0.86
Shroom3-201ENSMUST00000113051 Gm3646F6S692 53 aa9.67□□□□□ -0.86
Shroom3-201ENSMUST00000113051 Dmxl1Q6PNC0 3013 aa9.66□□□□□ -0.86
Shroom3-201ENSMUST00000113051 Gm10382Q3V0T5 144 aa9.65□□□□□ -0.86
Shroom3-201ENSMUST00000113051 BptfA2A654 3036 aaKnown RBP9.64□□□□□ -0.87
Shroom3-201ENSMUST00000113051 Ash1lQ99MY8 2958 aa9.64□□□□□ -0.87
Shroom3-201ENSMUST00000113051 Mast4Q811L6 2618 aa9.61□□□□□ -0.87
Shroom3-201ENSMUST00000113051 Itpr3P70227 2670 aa9.61□□□□□ -0.87
Shroom3-201ENSMUST00000113051 Igsf10Q3V1M1 2594 aa9.6□□□□□ -0.87
Shroom3-201ENSMUST00000113051 2310057N15RikQ9D6T8 200 aa9.59□□□□□ -0.87
Shroom3-201ENSMUST00000113051 Zfhx3Q61329 3726 aa9.59□□□□□ -0.87
Shroom3-201ENSMUST00000113051 Kmt2bO08550 2713 aa9.57□□□□□ -0.88
Shroom3-201ENSMUST00000113051 Itpr1P11881 2749 aa9.53□□□□□ -0.88
Shroom3-201ENSMUST00000113051 2310061N02RikQ9D6S9 174 aa9.53□□□□□ -0.88
Shroom3-201ENSMUST00000113051 Chd7A2AJK6 2986 aaKnown RBP9.53□□□□□ -0.88
Shroom3-201ENSMUST00000113051 AtmQ62388 3066 aa9.53□□□□□ -0.88
Shroom3-201ENSMUST00000113051 Map1aQ9QYR6 2776 aa9.51□□□□□ -0.89
Shroom3-201ENSMUST00000113051 Celsr3Q91ZI0 3301 aa9.51□□□□□ -0.89
Shroom3-201ENSMUST00000113051 NipblQ6KCD5 2798 aaKnown RBP9.51□□□□□ -0.89
Shroom3-201ENSMUST00000113051 Cfap54Q8C6S9 3106 aa9.51□□□□□ -0.89
Shroom3-201ENSMUST00000113051 Nbeal2Q6ZQA0 2742 aa9.51□□□□□ -0.89
Shroom3-201ENSMUST00000113051 Ubr5Q80TP3 2792 aa9.51□□□□□ -0.89
Shroom3-201ENSMUST00000113051 9530053A07RikE9PVG8 2581 aa9.46□□□□□ -0.89
Shroom3-201ENSMUST00000113051 Vps13aQ5H8C4 3166 aa9.45□□□□□ -0.9
Shroom3-201ENSMUST00000113051 Fbn2Q61555 2907 aa9.44□□□□□ -0.9
Shroom3-201ENSMUST00000113051 Unc80Q8BLN6 3261 aa9.43□□□□□ -0.9
Shroom3-201ENSMUST00000113051 Szt2A2A9C3 3431 aa9.42□□□□□ -0.9
Shroom3-201ENSMUST00000113051 Gm5965D3Z724 196 aa9.4□□□□□ -0.9
Shroom3-201ENSMUST00000113051 Celsr1O35161 3034 aa9.4□□□□□ -0.91
Shroom3-201ENSMUST00000113051 Tep1P97499 2629 aa9.38□□□□□ -0.91
Shroom3-201ENSMUST00000113051 KalrnA2CG49 2964 aa9.37□□□□□ -0.91
Shroom3-201ENSMUST00000113051 Chd6A3KFM7 2711 aa9.36□□□□□ -0.91
Shroom3-201ENSMUST00000113051 Myo15bI7HPW8 3033 aa9.34□□□□□ -0.91
Shroom3-201ENSMUST00000113051 Frem2Q6NVD0 3160 aa9.33□□□□□ -0.92
Shroom3-201ENSMUST00000113051 Gm2310J3QNJ2 377 aa9.32□□□□□ -0.92
Shroom3-201ENSMUST00000113051 Tnrc18Q80WC3 2878 aa9.3□□□□□ -0.92
Shroom3-201ENSMUST00000113051 Gm21887J3QQ04 176 aa9.28□□□□□ -0.92
Shroom3-201ENSMUST00000113051 Brca2P97929 3329 aa9.27□□□□□ -0.93
Shroom3-201ENSMUST00000113051 AspmQ8CJ27 3122 aa9.27□□□□□ -0.93
Shroom3-201ENSMUST00000113051 Stab2Q8R4U0 2559 aa9.24□□□□□ -0.93
Shroom3-201ENSMUST00000113051 Cox6b2Q80ZN9 88 aa9.22□□□□□ -0.93
Shroom3-201ENSMUST00000113051 1700042G07RikB1AUF7 90 aa9.22□□□□□ -0.93
Shroom3-201ENSMUST00000113051 Pkd1l1Q8R526 2615 aa9.21□□□□□ -0.93
Shroom3-201ENSMUST00000113051 Rps29P62274 56 aa9.2□□□□□ -0.94
Shroom3-201ENSMUST00000113051 4933415A04RikQ9D443 101 aa9.19□□□□□ -0.94
Shroom3-201ENSMUST00000113051 Lrrc37aB1AWG4 3215 aa9.18□□□□□ -0.94
Shroom3-201ENSMUST00000113051 Col6a3E9PWQ3 3284 aa9.17□□□□□ -0.94
Shroom3-201ENSMUST00000113051 Lama1P19137 3084 aa9.14□□□□□ -0.95
Shroom3-201ENSMUST00000113051 D6Ertd527eA0A0N4SWI3 464 aa9.12□□□□□ -0.95
Shroom3-201ENSMUST00000113051 Col6a5A6H584 2640 aa9.09□□□□□ -0.95
Shroom3-201ENSMUST00000113051 Ndufaf8A2AMZ4 74 aa9.07□□□□□ -0.96
Shroom3-201ENSMUST00000113051 FryE9Q8I9 3020 aa9.07□□□□□ -0.96
Shroom3-201ENSMUST00000113051 Muc2Q80Z19 2680 aa9.06□□□□□ -0.96
Shroom3-201ENSMUST00000113051 Itpr2Q9Z329 2701 aa9.06□□□□□ -0.96
Shroom3-201ENSMUST00000113051 Dchs2A0A0A6YW72 3346 aa9.06□□□□□ -0.96
Shroom3-201ENSMUST00000113051 Adgrg4B7ZCC9 3073 aa9.04□□□□□ -0.96
Shroom3-201ENSMUST00000113051 Wdfy4E9Q2M9 3149 aa9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 56.9 ms