RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 FasnP19096 2504 aaKnown RBP10.24□□□□□ -0.77
Shroom3-201ENSMUST00000113051 Krtap10-4Q08EG8 221 aa10.24□□□□□ -0.77
Shroom3-201ENSMUST00000113051 Odf3bQ5M8M2 238 aa10.23□□□□□ -0.77
Shroom3-201ENSMUST00000113051 PcntP48725 2898 aa10.22□□□□□ -0.77
Shroom3-201ENSMUST00000113051 Krtap13O88375 197 aa10.16□□□□□ -0.78
Shroom3-201ENSMUST00000113051 Gm10139O88245 57 aa10.15□□□□□ -0.79
Shroom3-201ENSMUST00000113051 Usp34Q6ZQ93 3582 aa10.15□□□□□ -0.79
Shroom3-201ENSMUST00000113051 Krtap10-10A0A1W2P7T6 217 aa10.12□□□□□ -0.79
Shroom3-201ENSMUST00000113051 FlnaQ8BTM8 2647 aaKnown RBP10.11□□□□□ -0.79
Shroom3-201ENSMUST00000113051 HrnrQ8VHD8 2496 aa10.1□□□□□ -0.79
Shroom3-201ENSMUST00000113051 Col12a1Q60847 3120 aa10.09□□□□□ -0.79
Shroom3-201ENSMUST00000113051 Gm9195A0A140LHT4 2805 aa10.09□□□□□ -0.79
Shroom3-201ENSMUST00000113051 Sec61bQ9CQS8 96 aaKnown RBP10.09□□□□□ -0.79
Shroom3-201ENSMUST00000113051 Sprr1aQ62266 144 aa10.04□□□□□ -0.8
Shroom3-201ENSMUST00000113051 Gm37013Q8K491 104 aa10.03□□□□□ -0.8
Shroom3-201ENSMUST00000113051 Fn1P11276 2477 aaKnown RBP10.01□□□□□ -0.81
Shroom3-201ENSMUST00000113051 Gm5767A0A0J9YTU8 78 aa10.01□□□□□ -0.81
Shroom3-201ENSMUST00000113051 Gm11565A2A4M7 156 aa10□□□□□ -0.81
Shroom3-201ENSMUST00000113051 Gm19426M0QWC7 77 aa10□□□□□ -0.81
Shroom3-201ENSMUST00000113051 Gcn1E9PVA8 2671 aaKnown RBP9.98□□□□□ -0.81
Shroom3-201ENSMUST00000113051 2310050C09RikG5E8Z3 280 aa9.95□□□□□ -0.82
Shroom3-201ENSMUST00000113051 Cystm1Q8K353 104 aa9.95□□□□□ -0.82
Shroom3-201ENSMUST00000113051 Krtap29-1A2A5X4 342 aa9.94□□□□□ -0.82
Shroom3-201ENSMUST00000113051 Hectd1Q69ZR2 2618 aaKnown RBP9.91□□□□□ -0.82
Shroom3-201ENSMUST00000113051 Gm16253D3Z167 63 aa9.9□□□□□ -0.82
Shroom3-201ENSMUST00000113051 HttP42859 3119 aa9.9□□□□□ -0.83
Shroom3-201ENSMUST00000113051 Mki67E9PVX6 3177 aaKnown RBP9.88□□□□□ -0.83
Shroom3-201ENSMUST00000113051 Rev3lQ61493 3122 aa9.84□□□□□ -0.83
Shroom3-201ENSMUST00000113051 Notch1Q01705 2531 aa9.84□□□□□ -0.83
Shroom3-201ENSMUST00000113051 Ranbp2Q9ERU9 3053 aaKnown RBP9.84□□□□□ -0.83
Shroom3-201ENSMUST00000113051 Gm7173A0A0G2JEB6 3132 aa9.83□□□□□ -0.84
Shroom3-201ENSMUST00000113051 Prrc2cQ3TLH4 2846 aaKnown RBP9.82□□□□□ -0.84
Shroom3-201ENSMUST00000113051 Cdh23Q99PF4 3354 aa9.81□□□□□ -0.84
Shroom3-201ENSMUST00000113051 Gm2696A0A1W2P709 240 aa9.8□□□□□ -0.84
Shroom3-201ENSMUST00000113051 BC029722A0A0N4SW31 51 aa9.79□□□□□ -0.84
Shroom3-201ENSMUST00000113051 Lama2Q60675 3118 aaKnown RBP9.77□□□□□ -0.84
Shroom3-201ENSMUST00000113051 Stab1Q8R4Y4 2571 aa9.77□□□□□ -0.84
Shroom3-201ENSMUST00000113051 A730071L15RikQ8C4X0 137 aa9.77□□□□□ -0.85
Shroom3-201ENSMUST00000113051 Akap13E9Q394 2776 aa9.75□□□□□ -0.85
Shroom3-201ENSMUST00000113051 Rpl37Q9D823 97 aa9.74□□□□□ -0.85
Shroom3-201ENSMUST00000113051 Romo1P60603 79 aa9.71□□□□□ -0.85
Shroom3-201ENSMUST00000113051 Tnp2P11378 117 aa9.71□□□□□ -0.85
Shroom3-201ENSMUST00000113051 MgaA2AWL7 3003 aaKnown RBP9.71□□□□□ -0.85
Shroom3-201ENSMUST00000113051 Krtap14O08640 167 aa9.71□□□□□ -0.86
Shroom3-201ENSMUST00000113051 Gm3646F6S692 53 aa9.67□□□□□ -0.86
Shroom3-201ENSMUST00000113051 Dmxl1Q6PNC0 3013 aa9.66□□□□□ -0.86
Shroom3-201ENSMUST00000113051 Gm10382Q3V0T5 144 aa9.65□□□□□ -0.86
Shroom3-201ENSMUST00000113051 BptfA2A654 3036 aaKnown RBP9.64□□□□□ -0.87
Shroom3-201ENSMUST00000113051 Ash1lQ99MY8 2958 aa9.64□□□□□ -0.87
Shroom3-201ENSMUST00000113051 Mast4Q811L6 2618 aa9.61□□□□□ -0.87
Shroom3-201ENSMUST00000113051 Itpr3P70227 2670 aa9.61□□□□□ -0.87
Shroom3-201ENSMUST00000113051 Igsf10Q3V1M1 2594 aa9.6□□□□□ -0.87
Shroom3-201ENSMUST00000113051 2310057N15RikQ9D6T8 200 aa9.59□□□□□ -0.87
Shroom3-201ENSMUST00000113051 Zfhx3Q61329 3726 aa9.59□□□□□ -0.87
Shroom3-201ENSMUST00000113051 Kmt2bO08550 2713 aa9.57□□□□□ -0.88
Shroom3-201ENSMUST00000113051 Itpr1P11881 2749 aa9.53□□□□□ -0.88
Shroom3-201ENSMUST00000113051 2310061N02RikQ9D6S9 174 aa9.53□□□□□ -0.88
Shroom3-201ENSMUST00000113051 Chd7A2AJK6 2986 aaKnown RBP9.53□□□□□ -0.88
Shroom3-201ENSMUST00000113051 AtmQ62388 3066 aa9.53□□□□□ -0.88
Shroom3-201ENSMUST00000113051 Map1aQ9QYR6 2776 aa9.51□□□□□ -0.89
Shroom3-201ENSMUST00000113051 Celsr3Q91ZI0 3301 aa9.51□□□□□ -0.89
Shroom3-201ENSMUST00000113051 NipblQ6KCD5 2798 aaKnown RBP9.51□□□□□ -0.89
Shroom3-201ENSMUST00000113051 Cfap54Q8C6S9 3106 aa9.51□□□□□ -0.89
Shroom3-201ENSMUST00000113051 Nbeal2Q6ZQA0 2742 aa9.51□□□□□ -0.89
Shroom3-201ENSMUST00000113051 Ubr5Q80TP3 2792 aa9.51□□□□□ -0.89
Shroom3-201ENSMUST00000113051 9530053A07RikE9PVG8 2581 aa9.46□□□□□ -0.89
Shroom3-201ENSMUST00000113051 Vps13aQ5H8C4 3166 aa9.45□□□□□ -0.9
Shroom3-201ENSMUST00000113051 Fbn2Q61555 2907 aa9.44□□□□□ -0.9
Shroom3-201ENSMUST00000113051 Unc80Q8BLN6 3261 aa9.43□□□□□ -0.9
Shroom3-201ENSMUST00000113051 Szt2A2A9C3 3431 aa9.42□□□□□ -0.9
Shroom3-201ENSMUST00000113051 Gm5965D3Z724 196 aa9.4□□□□□ -0.9
Shroom3-201ENSMUST00000113051 Celsr1O35161 3034 aa9.4□□□□□ -0.91
Shroom3-201ENSMUST00000113051 Tep1P97499 2629 aa9.38□□□□□ -0.91
Shroom3-201ENSMUST00000113051 KalrnA2CG49 2964 aa9.37□□□□□ -0.91
Shroom3-201ENSMUST00000113051 Chd6A3KFM7 2711 aa9.36□□□□□ -0.91
Shroom3-201ENSMUST00000113051 Myo15bI7HPW8 3033 aa9.34□□□□□ -0.91
Shroom3-201ENSMUST00000113051 Frem2Q6NVD0 3160 aa9.33□□□□□ -0.92
Shroom3-201ENSMUST00000113051 Gm2310J3QNJ2 377 aa9.32□□□□□ -0.92
Shroom3-201ENSMUST00000113051 Tnrc18Q80WC3 2878 aa9.3□□□□□ -0.92
Shroom3-201ENSMUST00000113051 Gm21887J3QQ04 176 aa9.28□□□□□ -0.92
Shroom3-201ENSMUST00000113051 Brca2P97929 3329 aa9.27□□□□□ -0.93
Shroom3-201ENSMUST00000113051 AspmQ8CJ27 3122 aa9.27□□□□□ -0.93
Shroom3-201ENSMUST00000113051 Stab2Q8R4U0 2559 aa9.24□□□□□ -0.93
Shroom3-201ENSMUST00000113051 Cox6b2Q80ZN9 88 aa9.22□□□□□ -0.93
Shroom3-201ENSMUST00000113051 1700042G07RikB1AUF7 90 aa9.22□□□□□ -0.93
Shroom3-201ENSMUST00000113051 Pkd1l1Q8R526 2615 aa9.21□□□□□ -0.93
Shroom3-201ENSMUST00000113051 Rps29P62274 56 aa9.2□□□□□ -0.94
Shroom3-201ENSMUST00000113051 4933415A04RikQ9D443 101 aa9.19□□□□□ -0.94
Shroom3-201ENSMUST00000113051 Lrrc37aB1AWG4 3215 aa9.18□□□□□ -0.94
Shroom3-201ENSMUST00000113051 Col6a3E9PWQ3 3284 aa9.17□□□□□ -0.94
Shroom3-201ENSMUST00000113051 Lama1P19137 3084 aa9.14□□□□□ -0.95
Shroom3-201ENSMUST00000113051 D6Ertd527eA0A0N4SWI3 464 aa9.12□□□□□ -0.95
Shroom3-201ENSMUST00000113051 Col6a5A6H584 2640 aa9.09□□□□□ -0.95
Shroom3-201ENSMUST00000113051 Ndufaf8A2AMZ4 74 aa9.07□□□□□ -0.96
Shroom3-201ENSMUST00000113051 FryE9Q8I9 3020 aa9.07□□□□□ -0.96
Shroom3-201ENSMUST00000113051 Muc2Q80Z19 2680 aa9.06□□□□□ -0.96
Shroom3-201ENSMUST00000113051 Itpr2Q9Z329 2701 aa9.06□□□□□ -0.96
Shroom3-201ENSMUST00000113051 Dchs2A0A0A6YW72 3346 aa9.06□□□□□ -0.96
Shroom3-201ENSMUST00000113051 Adgrg4B7ZCC9 3073 aa9.04□□□□□ -0.96
Shroom3-201ENSMUST00000113051 Wdfy4E9Q2M9 3149 aa9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 63.2 ms