RNA–Protein interactions for RNA: ENSMUST00000112354.2

Scn9a-203, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 6,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-203ENSMUST00000112354 Dmxl1Q6PNC0 3013 aa4.29□□□□□ -1.72
Scn9a-203ENSMUST00000112354 MgaA2AWL7 3003 aaKnown RBP4.28□□□□□ -1.72
Scn9a-203ENSMUST00000112354 Myo15bI7HPW8 3033 aa4.28□□□□□ -1.72
Scn9a-203ENSMUST00000112354 Bod1lE9Q6J5 3032 aa4.26□□□□□ -1.73
Scn9a-203ENSMUST00000112354 Prune2Q52KR3 3084 aa4.26□□□□□ -1.73
Scn9a-203ENSMUST00000112354 Plac8Q9JI48 112 aa4.25□□□□□ -1.73
Scn9a-203ENSMUST00000112354 AtrQ9JKK8 2635 aa4.23□□□□□ -1.73
Scn9a-203ENSMUST00000112354 FlnaQ8BTM8 2647 aaKnown RBP4.23□□□□□ -1.73
Scn9a-203ENSMUST00000112354 Spink7Q6IE32 76 aa4.23□□□□□ -1.73
Scn9a-203ENSMUST00000112354 Gm9821Q8K076 103 aa4.23□□□□□ -1.73
Scn9a-203ENSMUST00000112354 Odf3bQ5M8M2 238 aa4.22□□□□□ -1.73
Scn9a-203ENSMUST00000112354 Nbeal1E9PYP2 2688 aa4.22□□□□□ -1.73
Scn9a-203ENSMUST00000112354 Dchs1E9PVD3 3291 aa4.22□□□□□ -1.73
Scn9a-203ENSMUST00000112354 BptfA2A654 3036 aaKnown RBP4.21□□□□□ -1.73
Scn9a-203ENSMUST00000112354 Muc5acE9QAQ8 3455 aa4.21□□□□□ -1.74
Scn9a-203ENSMUST00000112354 Gm3233E9Q2H5 230 aa4.21□□□□□ -1.74
Scn9a-203ENSMUST00000112354 Celsr3Q91ZI0 3301 aa4.21□□□□□ -1.74
Scn9a-203ENSMUST00000112354 Lelp1Q9DAE3 120 aa4.2□□□□□ -1.74
Scn9a-203ENSMUST00000112354 SmcpP15265 143 aa4.19□□□□□ -1.74
Scn9a-203ENSMUST00000112354 Hectd1Q69ZR2 2618 aaKnown RBP4.19□□□□□ -1.74
Scn9a-203ENSMUST00000112354 1700042G07RikB1AUF7 90 aa4.18□□□□□ -1.74
Scn9a-203ENSMUST00000112354 Chtf8P0CG14 533 aa4.18□□□□□ -1.74
Scn9a-203ENSMUST00000112354 Gm9195A0A140LHT4 2805 aa4.18□□□□□ -1.74
Scn9a-203ENSMUST00000112354 Anapc11Q9CPX9 84 aa4.17□□□□□ -1.74
Scn9a-203ENSMUST00000112354 Sprr1aQ62266 144 aa4.17□□□□□ -1.74
Scn9a-203ENSMUST00000112354 Gm21798J3QNU5 87 aa4.17□□□□□ -1.74
Scn9a-203ENSMUST00000112354 Fn1P11276 2477 aaKnown RBP4.16□□□□□ -1.74
Scn9a-203ENSMUST00000112354 2310034C09RikQ9D746 214 aa4.16□□□□□ -1.74
Scn9a-203ENSMUST00000112354 Gm3880A0A1B0GSB3 72 aa4.16□□□□□ -1.74
Scn9a-203ENSMUST00000112354 Gm10139O88245 57 aa4.16□□□□□ -1.74
Scn9a-203ENSMUST00000112354 Wdfy4E9Q2M9 3149 aa4.16□□□□□ -1.74
Scn9a-203ENSMUST00000112354 Gm884A2A9H6 3643 aa4.16□□□□□ -1.74
Scn9a-203ENSMUST00000112354 Usp24B1AY13 2617 aaKnown RBP4.16□□□□□ -1.74
Scn9a-203ENSMUST00000112354 Fam229bQ8CF36 80 aa4.15□□□□□ -1.75
Scn9a-203ENSMUST00000112354 Smim29Q8R043 75 aa4.15□□□□□ -1.75
Scn9a-203ENSMUST00000112354 Gcn1E9PVA8 2671 aaKnown RBP4.14□□□□□ -1.75
Scn9a-203ENSMUST00000112354 Nsd1O88491 2588 aaKnown RBP4.14□□□□□ -1.75
Scn9a-203ENSMUST00000112354 SpenQ62504 3644 aaKnown RBP4.14□□□□□ -1.75
Scn9a-203ENSMUST00000112354 Gm3646F6S692 53 aa4.13□□□□□ -1.75
Scn9a-203ENSMUST00000112354 Gm9955Q8CEJ8 102 aa4.13□□□□□ -1.75
Scn9a-203ENSMUST00000112354 Zfhx4Q9JJN2 3550 aa4.13□□□□□ -1.75
Scn9a-203ENSMUST00000112354 Celsr1O35161 3034 aa4.12□□□□□ -1.75
Scn9a-203ENSMUST00000112354 Gm7138L7N2C3 230 aa4.12□□□□□ -1.75
Scn9a-203ENSMUST00000112354 Gm3238W4VSP7 230 aa4.12□□□□□ -1.75
Scn9a-203ENSMUST00000112354 Vps13cQ8BX70 3748 aa4.11□□□□□ -1.75
Scn9a-203ENSMUST00000112354 RelnQ60841 3461 aa4.11□□□□□ -1.75
Scn9a-203ENSMUST00000112354 6030445D17RikE9Q8F9 148 aa4.11□□□□□ -1.75
Scn9a-203ENSMUST00000112354 Gm17349F7BGH6 99 aa4.11□□□□□ -1.75
Scn9a-203ENSMUST00000112354 Dmbt1Q60997 2085 aa4.1□□□□□ -1.75
Scn9a-203ENSMUST00000112354 Camk2n1Q6QWF9 78 aa4.1□□□□□ -1.75
Scn9a-203ENSMUST00000112354 Gm16253D3Z167 63 aa4.1□□□□□ -1.75
Scn9a-203ENSMUST00000112354 Notch1Q01705 2531 aa4.1□□□□□ -1.75
Scn9a-203ENSMUST00000112354 Akap9Q70FJ1 3797 aa4.1□□□□□ -1.75
Scn9a-203ENSMUST00000112354 FryE9Q8I9 3020 aa4.1□□□□□ -1.75
Scn9a-203ENSMUST00000112354 4933415A04RikQ9D443 101 aa4.09□□□□□ -1.75
Scn9a-203ENSMUST00000112354 Stab1Q8R4Y4 2571 aa4.09□□□□□ -1.76
Scn9a-203ENSMUST00000112354 Gm4491E0CX42 125 aa4.08□□□□□ -1.76
Scn9a-203ENSMUST00000112354 Sec61bQ9CQS8 96 aaKnown RBP4.08□□□□□ -1.76
Scn9a-203ENSMUST00000112354 Krtap29-1A2A5X4 342 aa4.07□□□□□ -1.76
Scn9a-203ENSMUST00000112354 Gm10320E9PW43 113 aa4.07□□□□□ -1.76
Scn9a-203ENSMUST00000112354 Cystm1Q8K353 104 aa4.06□□□□□ -1.76
Scn9a-203ENSMUST00000112354 Fam229aB2KGE5 128 aa4.06□□□□□ -1.76
Scn9a-203ENSMUST00000112354 NipblQ6KCD5 2798 aaKnown RBP4.06□□□□□ -1.76
Scn9a-203ENSMUST00000112354 Kmt2bO08550 2713 aa4.05□□□□□ -1.76
Scn9a-203ENSMUST00000112354 Itpr1P11881 2749 aa4.04□□□□□ -1.76
Scn9a-203ENSMUST00000112354 Gm7137J3QMW1 236 aa4.04□□□□□ -1.76
Scn9a-203ENSMUST00000112354 KalrnA2CG49 2964 aa4.03□□□□□ -1.76
Scn9a-203ENSMUST00000112354 Akap13E9Q394 2776 aa4.03□□□□□ -1.76
Scn9a-203ENSMUST00000112354 Mast4Q811L6 2618 aa4.03□□□□□ -1.76
Scn9a-203ENSMUST00000112354 Dmxl2Q8BPN8 3032 aa4.03□□□□□ -1.76
Scn9a-203ENSMUST00000112354 Map1aQ9QYR6 2776 aa4.02□□□□□ -1.77
Scn9a-203ENSMUST00000112354 Ubr5Q80TP3 2792 aa4.02□□□□□ -1.77
Scn9a-203ENSMUST00000112354 Gm37013Q8K491 104 aa4.02□□□□□ -1.77
Scn9a-203ENSMUST00000112354 Igsf10Q3V1M1 2594 aa4.01□□□□□ -1.77
Scn9a-203ENSMUST00000112354 Rps29P62274 56 aa4.01□□□□□ -1.77
Scn9a-203ENSMUST00000112354 Gm5767A0A0J9YTU8 78 aa4□□□□□ -1.77
Scn9a-203ENSMUST00000112354 Gm36176A0A1W2P8D5 158 aa3.99□□□□□ -1.77
Scn9a-203ENSMUST00000112354 Krtap15-1Q9QZU5 150 aa3.99□□□□□ -1.77
Scn9a-203ENSMUST00000112354 Fbn2Q61555 2907 aa3.98□□□□□ -1.77
Scn9a-203ENSMUST00000112354 A730071L15RikQ8C4X0 137 aa3.98□□□□□ -1.77
Scn9a-203ENSMUST00000112354 Lama5Q61001 3718 aa3.97□□□□□ -1.77
Scn9a-203ENSMUST00000112354 Itpr3P70227 2670 aa3.97□□□□□ -1.77
Scn9a-203ENSMUST00000112354 Smg1Q8BKX6 3658 aaKnown RBP3.96□□□□□ -1.78
Scn9a-203ENSMUST00000112354 Chd6A3KFM7 2711 aa3.95□□□□□ -1.78
Scn9a-203ENSMUST00000112354 2310061N02RikQ9D6S9 174 aa3.93□□□□□ -1.78
Scn9a-203ENSMUST00000112354 Tep1P97499 2629 aa3.92□□□□□ -1.78
Scn9a-203ENSMUST00000112354 2310050C09RikG5E8Z3 280 aa3.92□□□□□ -1.78
Scn9a-203ENSMUST00000112354 Trank1Q8BV79 2999 aa3.92□□□□□ -1.78
Scn9a-203ENSMUST00000112354 Csmd1Q923L3 3564 aa3.91□□□□□ -1.78
Scn9a-203ENSMUST00000112354 BC029722A0A0N4SW31 51 aa3.91□□□□□ -1.78
Scn9a-203ENSMUST00000112354 HrnrQ8VHD8 2496 aa3.91□□□□□ -1.78
Scn9a-203ENSMUST00000112354 Stab2Q8R4U0 2559 aa3.9□□□□□ -1.78
Scn9a-203ENSMUST00000112354 Rpl37Q9D823 97 aa3.9□□□□□ -1.79
Scn9a-203ENSMUST00000112354 Tnp2P11378 117 aa3.89□□□□□ -1.79
Scn9a-203ENSMUST00000112354 Romo1P60603 79 aa3.89□□□□□ -1.79
Scn9a-203ENSMUST00000112354 9530053A07RikE9PVG8 2581 aa3.89□□□□□ -1.79
Scn9a-203ENSMUST00000112354 Gm19426M0QWC7 77 aa3.89□□□□□ -1.79
Scn9a-203ENSMUST00000112354 Krtap13O88375 197 aa3.89□□□□□ -1.79
Scn9a-203ENSMUST00000112354 Svep1A2AVA0 3567 aa3.88□□□□□ -1.79
Scn9a-203ENSMUST00000112354 NbeaQ9EPN1 2936 aa3.88□□□□□ -1.79
Retrieved 100 of 22,080 RNA–protein pairs in 60 ms