RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Pla2g1bQ9Z0Y2 146 aa8.02□□□□□ -1.13
Bdnf-205ENSMUST00000111045 Gm3443F7CCV5 94 aa8.02□□□□□ -1.13
Bdnf-205ENSMUST00000111045 Chd6A3KFM7 2711 aa8.02□□□□□ -1.13
Bdnf-205ENSMUST00000111045 NipblQ6KCD5 2798 aaKnown RBP8.01□□□□□ -1.13
Bdnf-205ENSMUST00000111045 Gm10320E9PW43 113 aa8.01□□□□□ -1.13
Bdnf-205ENSMUST00000111045 A730009L09RikA0A1B0GS82 72 aa8.01□□□□□ -1.13
Bdnf-205ENSMUST00000111045 Chd9Q8BYH8 2885 aa8□□□□□ -1.13
Bdnf-205ENSMUST00000111045 AtrQ9JKK8 2635 aa8□□□□□ -1.13
Bdnf-205ENSMUST00000111045 Gm3250E9Q1M3 230 aa7.99□□□□□ -1.13
Bdnf-205ENSMUST00000111045 LrbaQ9ESE1 2856 aa7.99□□□□□ -1.13
Bdnf-205ENSMUST00000111045 Lypd5Q9D7Z7 256 aa7.98□□□□□ -1.13
Bdnf-205ENSMUST00000111045 Igfn1Q3KNY0 2849 aa7.98□□□□□ -1.13
Bdnf-205ENSMUST00000111045 Gm28230A0A0A0MQ91 144 aa7.97□□□□□ -1.13
Bdnf-205ENSMUST00000111045 Nf1Q04690 2841 aa7.97□□□□□ -1.13
Bdnf-205ENSMUST00000111045 Celsr2Q9R0M0 2920 aa7.97□□□□□ -1.13
Bdnf-205ENSMUST00000111045 Bri3P28662 125 aa7.96□□□□□ -1.13
Bdnf-205ENSMUST00000111045 Igkv3-5A0A140T8M6 119 aa7.95□□□□□ -1.14
Bdnf-205ENSMUST00000111045 Uqcr11Q9CPX8 56 aa7.95□□□□□ -1.14
Bdnf-205ENSMUST00000111045 Defb42Q8BVB5 75 aa7.94□□□□□ -1.14
Bdnf-205ENSMUST00000111045 PscaP57096 123 aa7.93□□□□□ -1.14
Bdnf-205ENSMUST00000111045 Gm43218A0A0G2JGT0 114 aa7.92□□□□□ -1.14
Bdnf-205ENSMUST00000111045 Cmc4Q61908 68 aa7.92□□□□□ -1.14
Bdnf-205ENSMUST00000111045 A730071L15RikQ8C4X0 137 aa7.91□□□□□ -1.14
Bdnf-205ENSMUST00000111045 Notch1Q01705 2531 aa7.9□□□□□ -1.14
Bdnf-205ENSMUST00000111045 Gm16485Q8C4B7 115 aa7.9□□□□□ -1.14
Bdnf-205ENSMUST00000111045 2310034C09RikQ9D746 214 aa7.9□□□□□ -1.14
Bdnf-205ENSMUST00000111045 CicQ924A2 2510 aa7.9□□□□□ -1.15
Bdnf-205ENSMUST00000111045 Akap13E9Q394 2776 aa7.89□□□□□ -1.15
Bdnf-205ENSMUST00000111045 Krtap26-1Q9D7N2 215 aa7.88□□□□□ -1.15
Bdnf-205ENSMUST00000111045 OtogO55225 2910 aa7.88□□□□□ -1.15
Bdnf-205ENSMUST00000111045 Kmt2bO08550 2713 aa7.87□□□□□ -1.15
Bdnf-205ENSMUST00000111045 Gm10772F7AIG4 85 aa7.87□□□□□ -1.15
Bdnf-205ENSMUST00000111045 Defb1P56386 69 aa7.87□□□□□ -1.15
Bdnf-205ENSMUST00000111045 AY074887Q8R5F9 132 aa7.86□□□□□ -1.15
Bdnf-205ENSMUST00000111045 Sslp1Q3UN54 99 aa7.85□□□□□ -1.15
Bdnf-205ENSMUST00000111045 Stab1Q8R4Y4 2571 aa7.83□□□□□ -1.16
Bdnf-205ENSMUST00000111045 Mast4Q811L6 2618 aa7.83□□□□□ -1.16
Bdnf-205ENSMUST00000111045 Ighv8-13A0A075B5Y0 101 aa7.81□□□□□ -1.16
Bdnf-205ENSMUST00000111045 Gm3233E9Q2H5 230 aa7.81□□□□□ -1.16
Bdnf-205ENSMUST00000111045 AplnQ9R0R4 77 aa7.8□□□□□ -1.16
Bdnf-205ENSMUST00000111045 Zcchc13Q9D548 170 aa7.78□□□□□ -1.16
Bdnf-205ENSMUST00000111045 Gm10999F6Q4M4 69 aa7.78□□□□□ -1.16
Bdnf-205ENSMUST00000111045 CriptO70333 101 aa7.76□□□□□ -1.17
Bdnf-205ENSMUST00000111045 RetnlbQ99P86 105 aa7.76□□□□□ -1.17
Bdnf-205ENSMUST00000111045 Wfdc3Q14AE4 130 aa7.76□□□□□ -1.17
Bdnf-205ENSMUST00000111045 CubnQ9JLB4 3623 aa7.75□□□□□ -1.17
Bdnf-205ENSMUST00000111045 LystP97412 3788 aa7.74□□□□□ -1.17
Bdnf-205ENSMUST00000111045 D730001G18RikA0A087WQU7 115 aa7.74□□□□□ -1.17
Bdnf-205ENSMUST00000111045 Krtap24-1G3X9A2 248 aa7.73□□□□□ -1.17
Bdnf-205ENSMUST00000111045 Nsd1O88491 2588 aaKnown RBP7.72□□□□□ -1.17
Bdnf-205ENSMUST00000111045 Prm2P07978 107 aa7.72□□□□□ -1.17
Bdnf-205ENSMUST00000111045 Fn1P11276 2477 aaKnown RBP7.71□□□□□ -1.17
Bdnf-205ENSMUST00000111045 6030445D17RikE9Q8F9 148 aa7.71□□□□□ -1.18
Bdnf-205ENSMUST00000111045 Hivep1Q03172 2688 aa7.71□□□□□ -1.18
Bdnf-205ENSMUST00000111045 Gm3880A0A1B0GSB3 72 aa7.7□□□□□ -1.18
Bdnf-205ENSMUST00000111045 Gm11565A2A4M7 156 aa7.7□□□□□ -1.18
Bdnf-205ENSMUST00000111045 Gm37013Q8K491 104 aa7.7□□□□□ -1.18
Bdnf-205ENSMUST00000111045 Pdzd2E9Q1M1 2796 aa7.7□□□□□ -1.18
Bdnf-205ENSMUST00000111045 Dmac1Q9CQ00 111 aa7.69□□□□□ -1.18
Bdnf-205ENSMUST00000111045 Wfdc17Q5SSJ1 76 aa7.69□□□□□ -1.18
Bdnf-205ENSMUST00000111045 Tenm3Q9WTS6 2715 aa7.68□□□□□ -1.18
Bdnf-205ENSMUST00000111045 Sprr1bQ62267 153 aa7.68□□□□□ -1.18
Bdnf-205ENSMUST00000111045 Col6a5A6H584 2640 aa7.67□□□□□ -1.18
Bdnf-205ENSMUST00000111045 Krtap11-1E9Q2E9 183 aa7.66□□□□□ -1.18
Bdnf-205ENSMUST00000111045 Col7a1Q63870 2944 aa7.66□□□□□ -1.18
Bdnf-205ENSMUST00000111045 Xirp2Q4U4S6 3784 aa7.65□□□□□ -1.18
Bdnf-205ENSMUST00000111045 FasnP19096 2504 aaKnown RBP7.64□□□□□ -1.19
Bdnf-205ENSMUST00000111045 Nbeal2Q6ZQA0 2742 aa7.64□□□□□ -1.19
Bdnf-205ENSMUST00000111045 Tex15F8VPN2 2785 aa7.63□□□□□ -1.19
Bdnf-205ENSMUST00000111045 Defb9Q8R2I6 67 aa7.63□□□□□ -1.19
Bdnf-205ENSMUST00000111045 Prol1E9PYQ4 312 aa7.62□□□□□ -1.19
Bdnf-205ENSMUST00000111045 Romo1P60603 79 aa7.62□□□□□ -1.19
Bdnf-205ENSMUST00000111045 Rnase13Q5GAM7 153 aa7.62□□□□□ -1.19
Bdnf-205ENSMUST00000111045 Fam168bQ80XQ8 194 aa7.61□□□□□ -1.19
Bdnf-205ENSMUST00000111045 SycnQ8VCK7 134 aa7.61□□□□□ -1.19
Bdnf-205ENSMUST00000111045 Odf3bQ5M8M2 238 aa7.59□□□□□ -1.19
Bdnf-205ENSMUST00000111045 Gm21798J3QNU5 87 aa7.59□□□□□ -1.19
Bdnf-205ENSMUST00000111045 Helz2E9QAM5 2947 aaKnown RBP7.58□□□□□ -1.2
Bdnf-205ENSMUST00000111045 Gm27235Q3UW50 83 aa7.55□□□□□ -1.2
Bdnf-205ENSMUST00000111045 Sprr4Q8CGN8 76 aa7.54□□□□□ -1.2
Bdnf-205ENSMUST00000111045 Hspg2Q05793 3707 aaKnown RBP7.54□□□□□ -1.2
Bdnf-205ENSMUST00000111045 BsnO88737 3942 aa7.54□□□□□ -1.2
Bdnf-205ENSMUST00000111045 Itpr2Q9Z329 2701 aa7.52□□□□□ -1.21
Bdnf-205ENSMUST00000111045 Ndufaf8A2AMZ4 74 aa7.52□□□□□ -1.21
Bdnf-205ENSMUST00000111045 Gm7138L7N2C3 230 aa7.51□□□□□ -1.21
Bdnf-205ENSMUST00000111045 Gm3238W4VSP7 230 aa7.51□□□□□ -1.21
Bdnf-205ENSMUST00000111045 Gm11627A6PWP4 55 aa7.5□□□□□ -1.21
Bdnf-205ENSMUST00000111045 Psors1c2Q80ZC9 134 aa7.49□□□□□ -1.21
Bdnf-205ENSMUST00000111045 Gm17606F6ZL36 78 aa7.47□□□□□ -1.21
Bdnf-205ENSMUST00000111045 Defb39Q70KL3 74 aa7.47□□□□□ -1.21
Bdnf-205ENSMUST00000111045 Pkd1l1Q8R526 2615 aa7.47□□□□□ -1.21
Bdnf-205ENSMUST00000111045 Gm7137J3QMW1 236 aa7.46□□□□□ -1.22
Bdnf-205ENSMUST00000111045 Igsf10Q3V1M1 2594 aa7.46□□□□□ -1.22
Bdnf-205ENSMUST00000111045 Q8K1L6 76 aa7.45□□□□□ -1.22
Bdnf-205ENSMUST00000111045 Snhg11Q4G0K9 87 aa7.44□□□□□ -1.22
Bdnf-205ENSMUST00000111045 4930507D05RikQ8C9C9 103 aa7.44□□□□□ -1.22
Bdnf-205ENSMUST00000111045 Gm21887J3QQ04 176 aa7.43□□□□□ -1.22
Bdnf-205ENSMUST00000111045 9530053A07RikE9PVG8 2581 aa7.42□□□□□ -1.22
Bdnf-205ENSMUST00000111045 Gm10642Q3TWM1 71 aa7.4□□□□□ -1.23
Bdnf-205ENSMUST00000111045 Stab2Q8R4U0 2559 aa7.36□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 64.7 ms