RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Rpgrip1Q9EPQ2 1331 aa20.4■□□□□ 0.86
Bdnf-205ENSMUST00000111045 Rhox8Q6VSS7 320 aa20■□□□□ 0.79
Bdnf-205ENSMUST00000111045 Las1lA2BE28 776 aaKnown RBP19.95■□□□□ 0.78
Bdnf-205ENSMUST00000111045 NischQ80TM9 1593 aa19.72■□□□□ 0.75
Bdnf-205ENSMUST00000111045 DiexfQ8BTT6 772 aaKnown RBP19.63■□□□□ 0.73
Bdnf-205ENSMUST00000111045 CenpbP27790 599 aa19.49■□□□□ 0.71
Bdnf-205ENSMUST00000111045 Amer1Q7TS75 1132 aa19.44■□□□□ 0.7
Bdnf-205ENSMUST00000111045 Ehmt2Q9Z148 1263 aaKnown RBP19.39■□□□□ 0.7
Bdnf-205ENSMUST00000111045 Pcgf6Q99NA9 353 aa19.35■□□□□ 0.69
Bdnf-205ENSMUST00000111045 Myt1Q8CFC2 1127 aa19.34■□□□□ 0.69
Bdnf-205ENSMUST00000111045 Cngb1E1AZ71 1325 aa19.13■□□□□ 0.65
Bdnf-205ENSMUST00000111045 Acin1Q9JIX8 1338 aaKnown RBP19.01■□□□□ 0.63
Bdnf-205ENSMUST00000111045 Abcc9P70170 1546 aa18.82■□□□□ 0.6
Bdnf-205ENSMUST00000111045 Neurod1Q60867 357 aa18.67■□□□□ 0.58
Bdnf-205ENSMUST00000111045 Zeb1Q64318 1117 aa18.66■□□□□ 0.58
Bdnf-205ENSMUST00000111045 Bcl11aQ9QYE3 773 aa18.61■□□□□ 0.57
Bdnf-205ENSMUST00000111045 Supt5hO55201 1082 aaKnown RBP18.59■□□□□ 0.57
Bdnf-205ENSMUST00000111045 Abcc8B2RUS7 1588 aa18.45■□□□□ 0.54
Bdnf-205ENSMUST00000111045 1700123L14RikQ3V2K7 440 aa18.4■□□□□ 0.54
Bdnf-205ENSMUST00000111045 Pelp1Q9DBD5 1123 aaKnown RBP18.4■□□□□ 0.54
Bdnf-205ENSMUST00000111045 Gm35339A0A140LHH9 1649 aa18.36■□□□□ 0.53
Bdnf-205ENSMUST00000111045 Ttbk1Q6PCN3 1308 aa18.36■□□□□ 0.53
Bdnf-205ENSMUST00000111045 Csrnp3P59055 597 aa18.34■□□□□ 0.53
Bdnf-205ENSMUST00000111045 Ccdc136Q3TVA9 1136 aa18.32■□□□□ 0.52
Bdnf-205ENSMUST00000111045 Wdr66E9Q743 1299 aa18.32■□□□□ 0.52
Bdnf-205ENSMUST00000111045 Gm38655A0A286YDK6 273 aa18.2■□□□□ 0.5
Bdnf-205ENSMUST00000111045 PrkcshO08795 521 aa18.11■□□□□ 0.49
Bdnf-205ENSMUST00000111045 Cdk11bP24788 784 aaKnown RBP18.02■□□□□ 0.48
Bdnf-205ENSMUST00000111045 Aplp2Q06335 707 aa18■□□□□ 0.47
Bdnf-205ENSMUST00000111045 Anks4bQ8K3X6 423 aa17.96■□□□□ 0.47
Bdnf-205ENSMUST00000111045 Ccdc180J3QNE4 1664 aa17.84■□□□□ 0.45
Bdnf-205ENSMUST00000111045 Nop58Q6DFW4 536 aaKnown RBP17.83■□□□□ 0.44
Bdnf-205ENSMUST00000111045 Rtl1Q7M732 1744 aa17.81■□□□□ 0.44
Bdnf-205ENSMUST00000111045 Trim41Q5NCC3 630 aa17.73■□□□□ 0.43
Bdnf-205ENSMUST00000111045 Fam71e1A1L3C1 212 aa17.65■□□□□ 0.42
Bdnf-205ENSMUST00000111045 Ppargc1bQ8VHJ7 1014 aa17.63■□□□□ 0.41
Bdnf-205ENSMUST00000111045 Rtl5Q5DTT4 599 aa17.62■□□□□ 0.41
Bdnf-205ENSMUST00000111045 4933416C03RikQ3V063 378 aa17.62■□□□□ 0.41
Bdnf-205ENSMUST00000111045 NefmP08553 848 aa17.61■□□□□ 0.41
Bdnf-205ENSMUST00000111045 Gab3Q8BSM5 595 aa17.56■□□□□ 0.4
Bdnf-205ENSMUST00000111045 Sall2Q9QX96 1004 aa17.55■□□□□ 0.4
Bdnf-205ENSMUST00000111045 Mapk8ip2Q9ERE9 830 aa17.52■□□□□ 0.4
Bdnf-205ENSMUST00000111045 Ifnlr1Q8CGK5 535 aa17.51■□□□□ 0.39
Bdnf-205ENSMUST00000111045 Pknox2Q8BG99 474 aa17.49■□□□□ 0.39
Bdnf-205ENSMUST00000111045 HrcG5E8J6 738 aa17.47■□□□□ 0.39
Bdnf-205ENSMUST00000111045 Zcchc6Q5BLK4 1491 aaKnown RBP17.46■□□□□ 0.39
Bdnf-205ENSMUST00000111045 Esf1Q3V1V3 845 aaKnown RBP17.46■□□□□ 0.38
Bdnf-205ENSMUST00000111045 Tnnt3Q9QZ47 272 aa17.42■□□□□ 0.38
Bdnf-205ENSMUST00000111045 Anp32aO35381 247 aa17.38■□□□□ 0.37
Bdnf-205ENSMUST00000111045 Rb1cc1Q9ESK9 1588 aa17.3■□□□□ 0.36
Bdnf-205ENSMUST00000111045 Hdac5Q9Z2V6 1113 aa17.21■□□□□ 0.35
Bdnf-205ENSMUST00000111045 4930567H17RikQ3V0K5 233 aa17.16■□□□□ 0.34
Bdnf-205ENSMUST00000111045 DaxxO35613 739 aa17.14■□□□□ 0.34
Bdnf-205ENSMUST00000111045 Dcaf1Q80TR8 1506 aa17.14■□□□□ 0.33
Bdnf-205ENSMUST00000111045 Slc24a1Q91WD8 1130 aa17.1■□□□□ 0.33
Bdnf-205ENSMUST00000111045 SafbD3YXK2 937 aaKnown RBP17.06■□□□□ 0.32
Bdnf-205ENSMUST00000111045 Stra8P70278 393 aa17.06■□□□□ 0.32
Bdnf-205ENSMUST00000111045 NrdcQ8BHG1 1161 aa17.05■□□□□ 0.32
Bdnf-205ENSMUST00000111045 Irx3P81067 507 aa17.04■□□□□ 0.32
Bdnf-205ENSMUST00000111045 Myt1lP97500 1187 aa17.01■□□□□ 0.31
Bdnf-205ENSMUST00000111045 Kdm5dQ62240 1548 aa16.99■□□□□ 0.31
Bdnf-205ENSMUST00000111045 Taok2Q6ZQ29 1240 aa16.99■□□□□ 0.31
Bdnf-205ENSMUST00000111045 Gtf3c3Q3TMP1 882 aa16.99■□□□□ 0.31
Bdnf-205ENSMUST00000111045 ClspnQ80YR7 1315 aa16.98■□□□□ 0.31
Bdnf-205ENSMUST00000111045 Baz1aO88379 1555 aa16.97■□□□□ 0.31
Bdnf-205ENSMUST00000111045 Ccdc9Q8VC31 543 aaKnown RBP16.95■□□□□ 0.3
Bdnf-205ENSMUST00000111045 NacadQ5SWP3 1504 aa16.95■□□□□ 0.3
Bdnf-205ENSMUST00000111045 Plcd4Q8K3R3 807 aa16.95■□□□□ 0.3
Bdnf-205ENSMUST00000111045 Plppr3Q7TPB0 716 aa16.95■□□□□ 0.3
Bdnf-205ENSMUST00000111045 ScribQ80U72 1612 aa16.93■□□□□ 0.3
Bdnf-205ENSMUST00000111045 Npm2Q80W85 207 aa16.92■□□□□ 0.3
Bdnf-205ENSMUST00000111045 Ythdc1E9Q5K9 736 aaKnown RBP16.9■□□□□ 0.3
Bdnf-205ENSMUST00000111045 Mier1Q5UAK0 511 aa16.9■□□□□ 0.3
Bdnf-205ENSMUST00000111045 Chic1Q8CBW7 227 aa16.89■□□□□ 0.3
Bdnf-205ENSMUST00000111045 Hsp90aa1P07901 733 aaKnown RBP16.87■□□□□ 0.29
Bdnf-205ENSMUST00000111045 Ap3b1Q9Z1T1 1105 aa16.85■□□□□ 0.29
Bdnf-205ENSMUST00000111045 UbtfP25976 765 aaKnown RBP16.84■□□□□ 0.29
Bdnf-205ENSMUST00000111045 Eif5bQ05D44 1216 aaKnown RBP16.84■□□□□ 0.29
Bdnf-205ENSMUST00000111045 Fgd1P52734 960 aa16.82■□□□□ 0.28
Bdnf-205ENSMUST00000111045 Hnrnpul2Q00PI9 745 aaKnown RBP16.81■□□□□ 0.28
Bdnf-205ENSMUST00000111045 Ccdc27Q3V036 639 aa16.79■□□□□ 0.28
Bdnf-205ENSMUST00000111045 Upf2A2AT37 1269 aaKnown RBP16.79■□□□□ 0.28
Bdnf-205ENSMUST00000111045 Rtn4Q99P72 1162 aaKnown RBP16.78■□□□□ 0.28
Bdnf-205ENSMUST00000111045 Gtf3c5Q8R2T8 520 aa16.76■□□□□ 0.27
Bdnf-205ENSMUST00000111045 Ppp4r2Q0VGB7 417 aa16.75■□□□□ 0.27
Bdnf-205ENSMUST00000111045 Cep164Q5DU05 1446 aa16.74■□□□□ 0.27
Bdnf-205ENSMUST00000111045 BccipQ9CWI3 316 aa16.71■□□□□ 0.27
Bdnf-205ENSMUST00000111045 Calr4Q3TQS0 420 aa16.7■□□□□ 0.26
Bdnf-205ENSMUST00000111045 NeflP08551 543 aa16.7■□□□□ 0.26
Bdnf-205ENSMUST00000111045 Aebp2Q9Z248 504 aaKnown RBP16.69■□□□□ 0.26
Bdnf-205ENSMUST00000111045 Brd4Q9ESU6 1400 aaKnown RBP16.69■□□□□ 0.26
Bdnf-205ENSMUST00000111045 Il27Q8K3I6 234 aa16.67■□□□□ 0.26
Bdnf-205ENSMUST00000111045 Zbtb4Q5F293 982 aa16.63■□□□□ 0.25
Bdnf-205ENSMUST00000111045 Anp32bQ9EST5 272 aaKnown RBP16.6■□□□□ 0.25
Bdnf-205ENSMUST00000111045 TonslQ6NZL6 1363 aa16.59■□□□□ 0.25
Bdnf-205ENSMUST00000111045 CatipB9EKE5 520 aa16.58■□□□□ 0.24
Bdnf-205ENSMUST00000111045 Wdr43Q6ZQL4 677 aaKnown RBP16.56■□□□□ 0.24
Bdnf-205ENSMUST00000111045 Znf316Q6PGE4 1016 aa16.55■□□□□ 0.24
Bdnf-205ENSMUST00000111045 Rsf1E9PWW9 1441 aaKnown RBP16.53■□□□□ 0.24
Bdnf-205ENSMUST00000111045 Supt16hQ920B9 1047 aa16.51■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms