RNA–Protein interactions for RNA: ENSMUST00000110647.7

Trp53bp1-201, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trp53bp1, Length 9,405 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53bp1-201ENSMUST00000110647 Plac8Q9JI48 112 aa4.16□□□□□ -1.74
Trp53bp1-201ENSMUST00000110647 Krtap11-1E9Q2E9 183 aa4.15□□□□□ -1.74
Trp53bp1-201ENSMUST00000110647 Ep400Q8CHI8 3072 aaKnown RBP4.15□□□□□ -1.75
Trp53bp1-201ENSMUST00000110647 Gm3285A0A1W2P7U0 201 aa4.13□□□□□ -1.75
Trp53bp1-201ENSMUST00000110647 Prune2Q52KR3 3084 aa4.13□□□□□ -1.75
Trp53bp1-201ENSMUST00000110647 Ubr5Q80TP3 2792 aa4.12□□□□□ -1.75
Trp53bp1-201ENSMUST00000110647 CenpfE9Q3P4 2997 aaKnown RBP4.12□□□□□ -1.75
Trp53bp1-201ENSMUST00000110647 Hivep1Q03172 2688 aa4.1□□□□□ -1.75
Trp53bp1-201ENSMUST00000110647 Gm4491E0CX42 125 aa4.1□□□□□ -1.75
Trp53bp1-201ENSMUST00000110647 FlncQ8VHX6 2726 aaKnown RBP4.1□□□□□ -1.75
Trp53bp1-201ENSMUST00000110647 FcgbpE9Q0B5 2583 aa4.08□□□□□ -1.76
Trp53bp1-201ENSMUST00000110647 Gm11565A2A4M7 156 aa4.08□□□□□ -1.76
Trp53bp1-201ENSMUST00000110647 Gm19426M0QWC7 77 aa4.08□□□□□ -1.76
Trp53bp1-201ENSMUST00000110647 BC029722A0A0N4SW31 51 aa4.07□□□□□ -1.76
Trp53bp1-201ENSMUST00000110647 Gm5767A0A0J9YTU8 78 aa4.07□□□□□ -1.76
Trp53bp1-201ENSMUST00000110647 Cep350E9Q309 3095 aa4.06□□□□□ -1.76
Trp53bp1-201ENSMUST00000110647 C530025M09RikF6RGA8 229 aa4.06□□□□□ -1.76
Trp53bp1-201ENSMUST00000110647 6030445D17RikE9Q8F9 148 aa4.05□□□□□ -1.76
Trp53bp1-201ENSMUST00000110647 Ash1lQ99MY8 2958 aa4.05□□□□□ -1.76
Trp53bp1-201ENSMUST00000110647 Tex15F8VPN2 2785 aa4.05□□□□□ -1.76
Trp53bp1-201ENSMUST00000110647 Utp20Q5XG71 2788 aaKnown RBP4.04□□□□□ -1.76
Trp53bp1-201ENSMUST00000110647 Anapc11Q9CPX9 84 aa4.04□□□□□ -1.76
Trp53bp1-201ENSMUST00000110647 Muc2Q80Z19 2680 aa4.04□□□□□ -1.76
Trp53bp1-201ENSMUST00000110647 Krtap15-1Q9QZU5 150 aa4.03□□□□□ -1.76
Trp53bp1-201ENSMUST00000110647 Tnrc18Q80WC3 2878 aa4.03□□□□□ -1.76
Trp53bp1-201ENSMUST00000110647 Gm3880A0A1B0GSB3 72 aa4.03□□□□□ -1.76
Trp53bp1-201ENSMUST00000110647 Rpl37Q9D823 97 aa4.01□□□□□ -1.77
Trp53bp1-201ENSMUST00000110647 Rps29P62274 56 aa4.01□□□□□ -1.77
Trp53bp1-201ENSMUST00000110647 MgaA2AWL7 3003 aaKnown RBP4.01□□□□□ -1.77
Trp53bp1-201ENSMUST00000110647 Fam229bQ8CF36 80 aa4.01□□□□□ -1.77
Trp53bp1-201ENSMUST00000110647 Romo1P60603 79 aa3.99□□□□□ -1.77
Trp53bp1-201ENSMUST00000110647 Gm16253D3Z167 63 aa3.98□□□□□ -1.77
Trp53bp1-201ENSMUST00000110647 Lama2Q60675 3118 aaKnown RBP3.97□□□□□ -1.77
Trp53bp1-201ENSMUST00000110647 Gm3250E9Q1M3 230 aa3.97□□□□□ -1.77
Trp53bp1-201ENSMUST00000110647 Gm10139O88245 57 aa3.97□□□□□ -1.77
Trp53bp1-201ENSMUST00000110647 Gm7173A0A0G2JEB6 3132 aa3.96□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 Bod1lE9Q6J5 3032 aa3.95□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 Lama3Q61789 3330 aa3.95□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 Gm37013Q8K491 104 aa3.95□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 Cox6b2Q80ZN9 88 aa3.94□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 Igfn1Q3KNY0 2849 aa3.94□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 Usp34Q6ZQ93 3582 aa3.94□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 Gm21887J3QQ04 176 aa3.93□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 TrioQ0KL02 3102 aa3.93□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 Prr13Q9CQJ5 137 aa3.93□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 Krtap29-1A2A5X4 342 aa3.92□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 Dmxl1Q6PNC0 3013 aa3.92□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 Fbn2Q61555 2907 aa3.92□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 Sprr1aQ62266 144 aa3.91□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 KalrnA2CG49 2964 aa3.91□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 Gm10382Q3V0T5 144 aa3.91□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 ApcQ61315 2845 aa3.91□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 Myo15bI7HPW8 3033 aa3.91□□□□□ -1.78
Trp53bp1-201ENSMUST00000110647 Smim29Q8R043 75 aa3.89□□□□□ -1.79
Trp53bp1-201ENSMUST00000110647 Ranbp2Q9ERU9 3053 aaKnown RBP3.89□□□□□ -1.79
Trp53bp1-201ENSMUST00000110647 Rev3lQ61493 3122 aa3.89□□□□□ -1.79
Trp53bp1-201ENSMUST00000110647 Megf8P60882 2789 aa3.88□□□□□ -1.79
Trp53bp1-201ENSMUST00000110647 Srrm2Q8BTI8 2703 aaKnown RBP3.88□□□□□ -1.79
Trp53bp1-201ENSMUST00000110647 Chd7A2AJK6 2986 aaKnown RBP3.88□□□□□ -1.79
Trp53bp1-201ENSMUST00000110647 Tenm1Q9WTS4 2731 aa3.86□□□□□ -1.79
Trp53bp1-201ENSMUST00000110647 HttP42859 3119 aa3.84□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 Mki67E9PVX6 3177 aaKnown RBP3.83□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 Pdzd2E9Q1M1 2796 aa3.83□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 Gm40193A0A1B0GT39 78 aa3.82□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 Col12a1Q60847 3120 aa3.81□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 2310050C09RikG5E8Z3 280 aa3.81□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 Ndufaf8A2AMZ4 74 aa3.81□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 FrylF8VQ05 3007 aa3.81□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 DspE9Q557 2883 aaKnown RBP3.81□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 Gm2310J3QNJ2 377 aa3.81□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 Nf1Q04690 2841 aa3.81□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 Cfap54Q8C6S9 3106 aa3.8□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 Gm17349F7BGH6 99 aa3.8□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 FryE9Q8I9 3020 aa3.8□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 Tnp1P10856 55 aa3.8□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 TgO08710 2766 aa3.8□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 Zzef1Q5SSH7 2924 aa3.79□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 Vps13aQ5H8C4 3166 aa3.78□□□□□ -1.8
Trp53bp1-201ENSMUST00000110647 Gm3646F6S692 53 aa3.77□□□□□ -1.81
Trp53bp1-201ENSMUST00000110647 Gm3233E9Q2H5 230 aa3.77□□□□□ -1.81
Trp53bp1-201ENSMUST00000110647 AtmQ62388 3066 aa3.77□□□□□ -1.81
Trp53bp1-201ENSMUST00000110647 Tenm3Q9WTS6 2715 aa3.77□□□□□ -1.81
Trp53bp1-201ENSMUST00000110647 Wdfy4E9Q2M9 3149 aa3.75□□□□□ -1.81
Trp53bp1-201ENSMUST00000110647 NbeaQ9EPN1 2936 aa3.74□□□□□ -1.81
Trp53bp1-201ENSMUST00000110647 Cdh23Q99PF4 3354 aa3.73□□□□□ -1.81
Trp53bp1-201ENSMUST00000110647 Trank1Q8BV79 2999 aa3.71□□□□□ -1.82
Trp53bp1-201ENSMUST00000110647 AspmQ8CJ27 3122 aa3.7□□□□□ -1.82
Trp53bp1-201ENSMUST00000110647 Chd9Q8BYH8 2885 aa3.7□□□□□ -1.82
Trp53bp1-201ENSMUST00000110647 Gm7138L7N2C3 230 aa3.69□□□□□ -1.82
Trp53bp1-201ENSMUST00000110647 Gm3238W4VSP7 230 aa3.69□□□□□ -1.82
Trp53bp1-201ENSMUST00000110647 1700042G07RikB1AUF7 90 aa3.68□□□□□ -1.82
Trp53bp1-201ENSMUST00000110647 Gm7137J3QMW1 236 aa3.67□□□□□ -1.82
Trp53bp1-201ENSMUST00000110647 BptfA2A654 3036 aaKnown RBP3.67□□□□□ -1.82
Trp53bp1-201ENSMUST00000110647 Celsr1O35161 3034 aa3.67□□□□□ -1.82
Trp53bp1-201ENSMUST00000110647 Cystm1Q8K353 104 aa3.67□□□□□ -1.82
Trp53bp1-201ENSMUST00000110647 Tnp2P11378 117 aa3.66□□□□□ -1.82
Trp53bp1-201ENSMUST00000110647 D6Ertd527eA0A0N4SWI3 464 aa3.66□□□□□ -1.82
Trp53bp1-201ENSMUST00000110647 A730071L15RikQ8C4X0 137 aa3.66□□□□□ -1.82
Trp53bp1-201ENSMUST00000110647 Tenm4Q3UHK6 2771 aa3.65□□□□□ -1.82
Trp53bp1-201ENSMUST00000110647 Unc80Q8BLN6 3261 aa3.65□□□□□ -1.82
Retrieved 100 of 22,080 RNA–protein pairs in 57.8 ms