RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Lama3Q61789 3330 aa7.04□□□□□ -1.28
Chd3-202ENSMUST00000108661 Fn1P11276 2477 aaKnown RBP7.03□□□□□ -1.28
Chd3-202ENSMUST00000108661 6030445D17RikE9Q8F9 148 aa7.02□□□□□ -1.29
Chd3-202ENSMUST00000108661 Gm9507D3Z5T3 223 aa7.02□□□□□ -1.29
Chd3-202ENSMUST00000108661 HrnrQ8VHD8 2496 aa7.01□□□□□ -1.29
Chd3-202ENSMUST00000108661 Gm9955Q8CEJ8 102 aa6.99□□□□□ -1.29
Chd3-202ENSMUST00000108661 Odf3bQ5M8M2 238 aa6.97□□□□□ -1.29
Chd3-202ENSMUST00000108661 Gm5767A0A0J9YTU8 78 aa6.97□□□□□ -1.29
Chd3-202ENSMUST00000108661 Krtap13O88375 197 aa6.95□□□□□ -1.3
Chd3-202ENSMUST00000108661 Igsf10Q3V1M1 2594 aa6.94□□□□□ -1.3
Chd3-202ENSMUST00000108661 Camk2n1Q6QWF9 78 aa6.94□□□□□ -1.3
Chd3-202ENSMUST00000108661 PcntP48725 2898 aa6.93□□□□□ -1.3
Chd3-202ENSMUST00000108661 Krtap29-1A2A5X4 342 aa6.92□□□□□ -1.3
Chd3-202ENSMUST00000108661 Cep350E9Q309 3095 aa6.91□□□□□ -1.3
Chd3-202ENSMUST00000108661 Bod1lE9Q6J5 3032 aa6.91□□□□□ -1.3
Chd3-202ENSMUST00000108661 2310050C09RikG5E8Z3 280 aa6.91□□□□□ -1.3
Chd3-202ENSMUST00000108661 Sprr1aQ62266 144 aa6.89□□□□□ -1.31
Chd3-202ENSMUST00000108661 Gm10139O88245 57 aa6.89□□□□□ -1.31
Chd3-202ENSMUST00000108661 Krtap10-4Q08EG8 221 aa6.87□□□□□ -1.31
Chd3-202ENSMUST00000108661 Tnp2P11378 117 aa6.87□□□□□ -1.31
Chd3-202ENSMUST00000108661 Lama2Q60675 3118 aaKnown RBP6.86□□□□□ -1.31
Chd3-202ENSMUST00000108661 Stab1Q8R4Y4 2571 aa6.85□□□□□ -1.31
Chd3-202ENSMUST00000108661 Gm19426M0QWC7 77 aa6.85□□□□□ -1.31
Chd3-202ENSMUST00000108661 Notch1Q01705 2531 aa6.85□□□□□ -1.31
Chd3-202ENSMUST00000108661 Col12a1Q60847 3120 aa6.84□□□□□ -1.31
Chd3-202ENSMUST00000108661 Usp34Q6ZQ93 3582 aa6.84□□□□□ -1.32
Chd3-202ENSMUST00000108661 MgaA2AWL7 3003 aaKnown RBP6.83□□□□□ -1.32
Chd3-202ENSMUST00000108661 Gcn1E9PVA8 2671 aaKnown RBP6.83□□□□□ -1.32
Chd3-202ENSMUST00000108661 Itpr3P70227 2670 aa6.81□□□□□ -1.32
Chd3-202ENSMUST00000108661 Rev3lQ61493 3122 aa6.81□□□□□ -1.32
Chd3-202ENSMUST00000108661 Myo15bI7HPW8 3033 aa6.79□□□□□ -1.32
Chd3-202ENSMUST00000108661 Krtap10-10A0A1W2P7T6 217 aa6.79□□□□□ -1.32
Chd3-202ENSMUST00000108661 Mast4Q811L6 2618 aa6.77□□□□□ -1.33
Chd3-202ENSMUST00000108661 Gm16253D3Z167 63 aa6.76□□□□□ -1.33
Chd3-202ENSMUST00000108661 Cystm1Q8K353 104 aa6.74□□□□□ -1.33
Chd3-202ENSMUST00000108661 HttP42859 3119 aa6.74□□□□□ -1.33
Chd3-202ENSMUST00000108661 Gm7173A0A0G2JEB6 3132 aa6.74□□□□□ -1.33
Chd3-202ENSMUST00000108661 Gm3646F6S692 53 aa6.74□□□□□ -1.33
Chd3-202ENSMUST00000108661 Itpr1P11881 2749 aa6.72□□□□□ -1.33
Chd3-202ENSMUST00000108661 Ash1lQ99MY8 2958 aa6.7□□□□□ -1.34
Chd3-202ENSMUST00000108661 BC029722A0A0N4SW31 51 aa6.69□□□□□ -1.34
Chd3-202ENSMUST00000108661 Romo1P60603 79 aa6.68□□□□□ -1.34
Chd3-202ENSMUST00000108661 Gm37013Q8K491 104 aa6.68□□□□□ -1.34
Chd3-202ENSMUST00000108661 9530053A07RikE9PVG8 2581 aa6.66□□□□□ -1.34
Chd3-202ENSMUST00000108661 Ubr5Q80TP3 2792 aa6.65□□□□□ -1.34
Chd3-202ENSMUST00000108661 Gm2696A0A1W2P709 240 aa6.64□□□□□ -1.35
Chd3-202ENSMUST00000108661 Gm10382Q3V0T5 144 aa6.64□□□□□ -1.35
Chd3-202ENSMUST00000108661 Prrc2cQ3TLH4 2846 aaKnown RBP6.64□□□□□ -1.35
Chd3-202ENSMUST00000108661 Kmt2bO08550 2713 aa6.64□□□□□ -1.35
Chd3-202ENSMUST00000108661 Map1aQ9QYR6 2776 aa6.64□□□□□ -1.35
Chd3-202ENSMUST00000108661 Dmxl1Q6PNC0 3013 aa6.64□□□□□ -1.35
Chd3-202ENSMUST00000108661 Tep1P97499 2629 aa6.64□□□□□ -1.35
Chd3-202ENSMUST00000108661 Krtap14O08640 167 aa6.63□□□□□ -1.35
Chd3-202ENSMUST00000108661 2310061N02RikQ9D6S9 174 aa6.63□□□□□ -1.35
Chd3-202ENSMUST00000108661 Rpl37Q9D823 97 aa6.63□□□□□ -1.35
Chd3-202ENSMUST00000108661 Mki67E9PVX6 3177 aaKnown RBP6.62□□□□□ -1.35
Chd3-202ENSMUST00000108661 Nbeal2Q6ZQA0 2742 aa6.61□□□□□ -1.35
Chd3-202ENSMUST00000108661 Tnrc18Q80WC3 2878 aa6.61□□□□□ -1.35
Chd3-202ENSMUST00000108661 Chd7A2AJK6 2986 aaKnown RBP6.59□□□□□ -1.35
Chd3-202ENSMUST00000108661 Ranbp2Q9ERU9 3053 aaKnown RBP6.58□□□□□ -1.36
Chd3-202ENSMUST00000108661 Rps29P62274 56 aa6.56□□□□□ -1.36
Chd3-202ENSMUST00000108661 NipblQ6KCD5 2798 aaKnown RBP6.56□□□□□ -1.36
Chd3-202ENSMUST00000108661 BptfA2A654 3036 aaKnown RBP6.56□□□□□ -1.36
Chd3-202ENSMUST00000108661 Fbn2Q61555 2907 aa6.55□□□□□ -1.36
Chd3-202ENSMUST00000108661 KalrnA2CG49 2964 aa6.54□□□□□ -1.36
Chd3-202ENSMUST00000108661 Itpr2Q9Z329 2701 aa6.53□□□□□ -1.36
Chd3-202ENSMUST00000108661 Cdh23Q99PF4 3354 aa6.53□□□□□ -1.36
Chd3-202ENSMUST00000108661 AtmQ62388 3066 aa6.48□□□□□ -1.37
Chd3-202ENSMUST00000108661 Gm2310J3QNJ2 377 aa6.47□□□□□ -1.37
Chd3-202ENSMUST00000108661 2310057N15RikQ9D6T8 200 aa6.46□□□□□ -1.37
Chd3-202ENSMUST00000108661 Ndufaf8A2AMZ4 74 aa6.46□□□□□ -1.38
Chd3-202ENSMUST00000108661 A730071L15RikQ8C4X0 137 aa6.46□□□□□ -1.38
Chd3-202ENSMUST00000108661 Igfn1Q3KNY0 2849 aa6.45□□□□□ -1.38
Chd3-202ENSMUST00000108661 Chd6A3KFM7 2711 aa6.45□□□□□ -1.38
Chd3-202ENSMUST00000108661 Unc80Q8BLN6 3261 aa6.44□□□□□ -1.38
Chd3-202ENSMUST00000108661 1700042G07RikB1AUF7 90 aa6.44□□□□□ -1.38
Chd3-202ENSMUST00000108661 Frem2Q6NVD0 3160 aa6.44□□□□□ -1.38
Chd3-202ENSMUST00000108661 Col6a5A6H584 2640 aa6.43□□□□□ -1.38
Chd3-202ENSMUST00000108661 Pkd1l1Q8R526 2615 aa6.43□□□□□ -1.38
Chd3-202ENSMUST00000108661 D6Ertd527eA0A0N4SWI3 464 aa6.43□□□□□ -1.38
Chd3-202ENSMUST00000108661 Muc2Q80Z19 2680 aa6.43□□□□□ -1.38
Chd3-202ENSMUST00000108661 A930033H14RikG5E8X6 103 aa6.43□□□□□ -1.38
Chd3-202ENSMUST00000108661 Stab2Q8R4U0 2559 aa6.41□□□□□ -1.38
Chd3-202ENSMUST00000108661 Tenm4Q3UHK6 2771 aa6.4□□□□□ -1.39
Chd3-202ENSMUST00000108661 Cfap54Q8C6S9 3106 aa6.39□□□□□ -1.39
Chd3-202ENSMUST00000108661 Gm5965D3Z724 196 aa6.39□□□□□ -1.39
Chd3-202ENSMUST00000108661 Vps13aQ5H8C4 3166 aa6.38□□□□□ -1.39
Chd3-202ENSMUST00000108661 4933415A04RikQ9D443 101 aa6.38□□□□□ -1.39
Chd3-202ENSMUST00000108661 Celsr1O35161 3034 aa6.37□□□□□ -1.39
Chd3-202ENSMUST00000108661 FryE9Q8I9 3020 aa6.36□□□□□ -1.39
Chd3-202ENSMUST00000108661 Szt2A2A9C3 3431 aa6.34□□□□□ -1.39
Chd3-202ENSMUST00000108661 Celsr3Q91ZI0 3301 aa6.34□□□□□ -1.39
Chd3-202ENSMUST00000108661 AspmQ8CJ27 3122 aa6.33□□□□□ -1.4
Chd3-202ENSMUST00000108661 Utp20Q5XG71 2788 aaKnown RBP6.29□□□□□ -1.4
Chd3-202ENSMUST00000108661 Gm9112A2AI92 75 aa6.28□□□□□ -1.4
Chd3-202ENSMUST00000108661 FcgbpE9Q0B5 2583 aa6.25□□□□□ -1.41
Chd3-202ENSMUST00000108661 Hivep1Q03172 2688 aa6.24□□□□□ -1.41
Chd3-202ENSMUST00000108661 Gm21887J3QQ04 176 aa6.22□□□□□ -1.41
Chd3-202ENSMUST00000108661 Lama1P19137 3084 aa6.21□□□□□ -1.41
Chd3-202ENSMUST00000108661 Zfhx3Q61329 3726 aa6.21□□□□□ -1.41
Retrieved 100 of 22,080 RNA–protein pairs in 66.3 ms