RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Q8K1L6 76 aa6.1□□□□□ -1.43
Ccdc38-201ENSMUST00000092215 Pkd1O08852 4293 aa6.1□□□□□ -1.43
Ccdc38-201ENSMUST00000092215 Gm27235Q3UW50 83 aa6.1□□□□□ -1.43
Ccdc38-201ENSMUST00000092215 ApobE9Q414 4505 aa6.09□□□□□ -1.43
Ccdc38-201ENSMUST00000092215 Rpl37aP61514 92 aa6.09□□□□□ -1.43
Ccdc38-201ENSMUST00000092215 Gm37389A0A0A6YW05 95 aa6.09□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 Vpreb3D3Z6J4 130 aa6.09□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 9530003J23RikQ8BM26 151 aa6.08□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 Igkv3-7A0A0G2JE31 119 aa6.07□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 Gm10401E9Q3K6 71 aa6.07□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 A830005F24RikQ8BRT5 167 aa6.07□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 Ccdc179J3QM76 67 aa6.07□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 Defa25Q5G864 92 aa6.07□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 AI606181Q8C7B9 129 aa6.07□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 Acyp1P56376 99 aa6.06□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 Fam19a3Q7TPG6 132 aa6.06□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 A930002H24RikQ8C8Y3 163 aa6.06□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 Sfta2E9PXB6 77 aa6.06□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 Gm20726G3UX18 150 aa6.06□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 Tnp2P11378 117 aa6.06□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 Igkv3-10A0A0G2JGN0 119 aa6.05□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 Mrpl55Q9CZ83 127 aa6.05□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 Vpreb1P13372 142 aa6.04□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 P06320 134 aa6.03□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 Dph3Q8K0W9 82 aa6.03□□□□□ -1.44
Ccdc38-201ENSMUST00000092215 Ifitm6A0A1B0GS75 124 aa6.02□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Defb39Q70KL3 74 aa6.02□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Inafm2A0A1L1STD6 152 aa6.02□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Gm10139O88245 57 aa6.02□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 SacsQ9JLC8 4582 aa6.02□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Lrp1bQ9JI18 4599 aa6.01□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 1700018G05RikA0A1B0GSI2 66 aa6□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Bud31Q6PGH1 103 aa6□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Znf706Q9D115 76 aaKnown RBP6□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Igkv8-27A0A0G2JF28 120 aa5.99□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Igkv8-30A0A140T8M3 121 aa5.99□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Gtf2h5Q8K2X8 71 aa5.99□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Trav14d-3-dv8A0A075B619 120 aa5.98□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Odf3bQ5M8M2 238 aa5.98□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 4930535I16RikQ9CUI2 172 aa5.98□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Bean1Q9EQG5 255 aa5.98□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Cox6a2P43023 97 aa5.98□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Q8BT88 171 aa5.98□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Rbm3O89086 153 aaKnown RBP5.97□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Xcl1P47993 114 aa5.97□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Pxt1Q8K459 51 aa5.97□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Ighv10-3A0A075B5T6 119 aa5.96□□□□□ -1.45
Ccdc38-201ENSMUST00000092215 Pkhd1E9PZ36 4059 aa5.95□□□□□ -1.46
Ccdc38-201ENSMUST00000092215 MplkipQ9D011 178 aa5.94□□□□□ -1.46
Ccdc38-201ENSMUST00000092215 Gm28230A0A0A0MQ91 144 aa5.94□□□□□ -1.46
Ccdc38-201ENSMUST00000092215 Igkv8-28A0A0G2JE47 121 aa5.94□□□□□ -1.46
Ccdc38-201ENSMUST00000092215 BatfO35284 125 aa5.94□□□□□ -1.46
Ccdc38-201ENSMUST00000092215 Spaca4Q80ZQ0 127 aa5.94□□□□□ -1.46
Ccdc38-201ENSMUST00000092215 Igkv3-4A0A140T8Q4 119 aa5.92□□□□□ -1.46
Ccdc38-201ENSMUST00000092215 Lyrm7Q9DA03 104 aa5.92□□□□□ -1.46
Ccdc38-201ENSMUST00000092215 Lrp1Q91ZX7 4545 aaKnown RBP5.91□□□□□ -1.46
Ccdc38-201ENSMUST00000092215 Kmt2cQ8BRH4 4903 aa5.91□□□□□ -1.46
Ccdc38-201ENSMUST00000092215 Gm12353A2AGJ4 60 aa5.9□□□□□ -1.47
Ccdc38-201ENSMUST00000092215 Sprr2jO70561 109 aa5.89□□□□□ -1.47
Ccdc38-201ENSMUST00000092215 Ormdl1Q921I0 153 aa5.89□□□□□ -1.47
Ccdc38-201ENSMUST00000092215 Krtap19-5O08632 62 aa5.89□□□□□ -1.47
Ccdc38-201ENSMUST00000092215 A730071L15RikQ8C4X0 137 aa5.89□□□□□ -1.47
Ccdc38-201ENSMUST00000092215 Hectd4E9Q2E4 4418 aa5.89□□□□□ -1.47
Ccdc38-201ENSMUST00000092215 Cypt14J3QPF7 87 aa5.89□□□□□ -1.47
Ccdc38-201ENSMUST00000092215 Gm44790A0A0N4SV91 103 aa5.88□□□□□ -1.47
Ccdc38-201ENSMUST00000092215 Herc2Q4U2R1 4836 aa5.88□□□□□ -1.47
Ccdc38-201ENSMUST00000092215 Pde6gP09174 87 aa5.87□□□□□ -1.47
Ccdc38-201ENSMUST00000092215 Chchd10Q7TNL9 138 aa5.87□□□□□ -1.47
Ccdc38-201ENSMUST00000092215 Defb12Q8K4N3 78 aa5.87□□□□□ -1.47
Ccdc38-201ENSMUST00000092215 Defa21Q8C1P2 93 aa5.85□□□□□ -1.47
Ccdc38-201ENSMUST00000092215 Kiaa1109A2AAE1 5005 aa5.85□□□□□ -1.47
Ccdc38-201ENSMUST00000092215 Gm45213A0A0U1RNZ6 101 aa5.85□□□□□ -1.47
Ccdc38-201ENSMUST00000092215 Gm21886J3QJU9 214 aa5.85□□□□□ -1.47
Ccdc38-201ENSMUST00000092215 Ubl5Q9EPV8 73 aa5.85□□□□□ -1.47
Ccdc38-201ENSMUST00000092215 Abca13Q5SSE9 5034 aa5.83□□□□□ -1.48
Ccdc38-201ENSMUST00000092215 C130032M10RikQ8C888 123 aa5.83□□□□□ -1.48
Ccdc38-201ENSMUST00000092215 Mrpl34Q99N91 92 aa5.83□□□□□ -1.48
Ccdc38-201ENSMUST00000092215 Dnah8Q91XQ0 4731 aa5.83□□□□□ -1.48
Ccdc38-201ENSMUST00000092215 Cby1Q9D1C2 127 aa5.81□□□□□ -1.48
Ccdc38-201ENSMUST00000092215 UqcrqQ9CQ69 82 aa5.8□□□□□ -1.48
Ccdc38-201ENSMUST00000092215 Fat2Q5F226 4351 aa5.8□□□□□ -1.48
Ccdc38-201ENSMUST00000092215 Igkv8-21A0A140T8P7 120 aa5.8□□□□□ -1.48
Ccdc38-201ENSMUST00000092215 Reg3aO09037 175 aa5.8□□□□□ -1.48
Ccdc38-201ENSMUST00000092215 Fam240bJ3QMB3 78 aa5.79□□□□□ -1.48
Ccdc38-201ENSMUST00000092215 Gm17689B3GLJ4 109 aa5.79□□□□□ -1.48
Ccdc38-201ENSMUST00000092215 Hist1h4aP62806 103 aaKnown RBP5.79□□□□□ -1.48
Ccdc38-201ENSMUST00000092215 Gm10308Q9CVR5 141 aa5.79□□□□□ -1.48
Ccdc38-201ENSMUST00000092215 Fat3Q8BNA6 4555 aa5.78□□□□□ -1.48
Ccdc38-201ENSMUST00000092215 Gm9736A0A1W2P7N1 277 aa5.78□□□□□ -1.48
Ccdc38-201ENSMUST00000092215 Cdip1Q9DB75 208 aa5.78□□□□□ -1.48
Ccdc38-201ENSMUST00000092215 Trav3-1Q5R1I8 114 aa5.77□□□□□ -1.49
Ccdc38-201ENSMUST00000092215 Tmem213Q08EA8 116 aa5.76□□□□□ -1.49
Ccdc38-201ENSMUST00000092215 HydinQ80W93 5154 aa5.75□□□□□ -1.49
Ccdc38-201ENSMUST00000092215 Gm16253D3Z167 63 aa5.74□□□□□ -1.49
Ccdc38-201ENSMUST00000092215 Vps13bQ80TY5 3993 aa5.74□□□□□ -1.49
Ccdc38-201ENSMUST00000092215 Tmem254aP0DN89 123 aa5.73□□□□□ -1.49
Ccdc38-201ENSMUST00000092215 Tmem254bP0DN90 123 aa5.73□□□□□ -1.49
Ccdc38-201ENSMUST00000092215 Tmem254cP0DN91 123 aa5.73□□□□□ -1.49
Ccdc38-201ENSMUST00000092215 Prr15lQ8JZM2 100 aa5.72□□□□□ -1.49
Ccdc38-201ENSMUST00000092215 A530084C06RikQ3UTW2 186 aa5.72□□□□□ -1.49
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms