RNA–Protein interactions for RNA: ENSMUST00000068156.7

Vps13a-201, Transcript of Vacuolar protein sorting-associated protein 13A, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Vps13a, Length 10,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13a-201ENSMUST00000068156 Gm21798J3QNU5 87 aa4.35□□□□□ -1.71
Vps13a-201ENSMUST00000068156 Ptpn13Q64512 2453 aa4.34□□□□□ -1.71
Vps13a-201ENSMUST00000068156 Gm37013Q8K491 104 aa4.34□□□□□ -1.71
Vps13a-201ENSMUST00000068156 Usp9xP70398 2559 aaKnown RBP4.34□□□□□ -1.72
Vps13a-201ENSMUST00000068156 Gm9821Q8K076 103 aa4.34□□□□□ -1.72
Vps13a-201ENSMUST00000068156 Gm4491E0CX42 125 aa4.33□□□□□ -1.72
Vps13a-201ENSMUST00000068156 Rif1Q6PR54 2419 aaKnown RBP4.32□□□□□ -1.72
Vps13a-201ENSMUST00000068156 Notch3Q61982 2318 aa4.32□□□□□ -1.72
Vps13a-201ENSMUST00000068156 C2cd3Q52KB6 2323 aa4.32□□□□□ -1.72
Vps13a-201ENSMUST00000068156 Zfp292Q9Z2U2 2698 aa4.31□□□□□ -1.72
Vps13a-201ENSMUST00000068156 Myo15bI7HPW8 3033 aa4.31□□□□□ -1.72
Vps13a-201ENSMUST00000068156 RelnQ60841 3461 aa4.3□□□□□ -1.72
Vps13a-201ENSMUST00000068156 2310050C09RikG5E8Z3 280 aa4.3□□□□□ -1.72
Vps13a-201ENSMUST00000068156 Hivep3A2A884 2348 aa4.3□□□□□ -1.72
Vps13a-201ENSMUST00000068156 Bahcc1Q3UHR0 2643 aa4.28□□□□□ -1.72
Vps13a-201ENSMUST00000068156 Gm9507D3Z5T3 223 aa4.28□□□□□ -1.72
Vps13a-201ENSMUST00000068156 Epg5Q80TA9 2572 aa4.28□□□□□ -1.72
Vps13a-201ENSMUST00000068156 Krtap13O88375 197 aa4.27□□□□□ -1.73
Vps13a-201ENSMUST00000068156 Zfhx4Q9JJN2 3550 aa4.27□□□□□ -1.73
Vps13a-201ENSMUST00000068156 Nav3Q80TN7 2359 aa4.26□□□□□ -1.73
Vps13a-201ENSMUST00000068156 Zfhx3Q61329 3726 aa4.26□□□□□ -1.73
Vps13a-201ENSMUST00000068156 Adgrg4B7ZCC9 3073 aa4.25□□□□□ -1.73
Vps13a-201ENSMUST00000068156 TrrapQ80YV3 2565 aaKnown RBP4.25□□□□□ -1.73
Vps13a-201ENSMUST00000068156 Gm9195A0A140LHT4 2805 aa4.25□□□□□ -1.73
Vps13a-201ENSMUST00000068156 KalrnA2CG49 2964 aa4.24□□□□□ -1.73
Vps13a-201ENSMUST00000068156 Mp68P56379 58 aa4.23□□□□□ -1.73
Vps13a-201ENSMUST00000068156 Krtap14O08640 167 aa4.22□□□□□ -1.73
Vps13a-201ENSMUST00000068156 Krtap15-1Q9QZU5 150 aa4.22□□□□□ -1.73
Vps13a-201ENSMUST00000068156 Zfp462B1AWL2 2495 aaKnown RBP4.22□□□□□ -1.73
Vps13a-201ENSMUST00000068156 Gm9955Q8CEJ8 102 aa4.22□□□□□ -1.73
Vps13a-201ENSMUST00000068156 Csmd1Q923L3 3564 aa4.21□□□□□ -1.73
Vps13a-201ENSMUST00000068156 Abca12E9Q876 2595 aa4.21□□□□□ -1.74
Vps13a-201ENSMUST00000068156 Tnp2P11378 117 aa4.2□□□□□ -1.74
Vps13a-201ENSMUST00000068156 Ankrd17Q99NH0 2603 aaKnown RBP4.2□□□□□ -1.74
Vps13a-201ENSMUST00000068156 Celsr1O35161 3034 aa4.2□□□□□ -1.74
Vps13a-201ENSMUST00000068156 Gm2310J3QNJ2 377 aa4.19□□□□□ -1.74
Vps13a-201ENSMUST00000068156 Krtap10-4Q08EG8 221 aa4.19□□□□□ -1.74
Vps13a-201ENSMUST00000068156 Muc5acE9QAQ8 3455 aa4.18□□□□□ -1.74
Vps13a-201ENSMUST00000068156 Rps29P62274 56 aa4.18□□□□□ -1.74
Vps13a-201ENSMUST00000068156 Gm5767A0A0J9YTU8 78 aa4.16□□□□□ -1.74
Vps13a-201ENSMUST00000068156 Unc79Q0KK59 2596 aa4.15□□□□□ -1.75
Vps13a-201ENSMUST00000068156 Ash1lQ99MY8 2958 aa4.14□□□□□ -1.75
Vps13a-201ENSMUST00000068156 Dmxl2Q8BPN8 3032 aa4.14□□□□□ -1.75
Vps13a-201ENSMUST00000068156 Fam229aB2KGE5 128 aa4.14□□□□□ -1.75
Vps13a-201ENSMUST00000068156 Nbeal1E9PYP2 2688 aa4.14□□□□□ -1.75
Vps13a-201ENSMUST00000068156 Fbn2Q61555 2907 aa4.13□□□□□ -1.75
Vps13a-201ENSMUST00000068156 CriptO70333 101 aa4.13□□□□□ -1.75
Vps13a-201ENSMUST00000068156 MtorQ9JLN9 2549 aa4.13□□□□□ -1.75
Vps13a-201ENSMUST00000068156 FryE9Q8I9 3020 aa4.13□□□□□ -1.75
Vps13a-201ENSMUST00000068156 Gm3880A0A1B0GSB3 72 aa4.13□□□□□ -1.75
Vps13a-201ENSMUST00000068156 Sec61bQ9CQS8 96 aaKnown RBP4.13□□□□□ -1.75
Vps13a-201ENSMUST00000068156 SmcpP15265 143 aa4.12□□□□□ -1.75
Vps13a-201ENSMUST00000068156 Krtap10-10A0A1W2P7T6 217 aa4.1□□□□□ -1.75
Vps13a-201ENSMUST00000068156 Notch2O35516 2470 aa4.09□□□□□ -1.75
Vps13a-201ENSMUST00000068156 Spink7Q6IE32 76 aa4.09□□□□□ -1.75
Vps13a-201ENSMUST00000068156 DmdP11531 3678 aa4.09□□□□□ -1.75
Vps13a-201ENSMUST00000068156 Gm3646F6S692 53 aa4.08□□□□□ -1.76
Vps13a-201ENSMUST00000068156 Vps13cQ8BX70 3748 aa4.08□□□□□ -1.76
Vps13a-201ENSMUST00000068156 4933415A04RikQ9D443 101 aa4.07□□□□□ -1.76
Vps13a-201ENSMUST00000068156 Hectd1Q69ZR2 2618 aaKnown RBP4.07□□□□□ -1.76
Vps13a-201ENSMUST00000068156 CicQ924A2 2510 aa4.06□□□□□ -1.76
Vps13a-201ENSMUST00000068156 FlnaQ8BTM8 2647 aaKnown RBP4.06□□□□□ -1.76
Vps13a-201ENSMUST00000068156 Setd2E9Q5F9 2537 aa4.05□□□□□ -1.76
Vps13a-201ENSMUST00000068156 Gm884A2A9H6 3643 aa4.05□□□□□ -1.76
Vps13a-201ENSMUST00000068156 PtprqP0C5E4 2300 aa4.04□□□□□ -1.76
Vps13a-201ENSMUST00000068156 SpenQ62504 3644 aaKnown RBP4.04□□□□□ -1.76
Vps13a-201ENSMUST00000068156 Rpl37Q9D823 97 aa4.04□□□□□ -1.76
Vps13a-201ENSMUST00000068156 Itpr3P70227 2670 aa4.04□□□□□ -1.76
Vps13a-201ENSMUST00000068156 BC029722A0A0N4SW31 51 aa4.03□□□□□ -1.76
Vps13a-201ENSMUST00000068156 Gm2696A0A1W2P709 240 aa4.03□□□□□ -1.76
Vps13a-201ENSMUST00000068156 Nsd1O88491 2588 aaKnown RBP4.03□□□□□ -1.76
Vps13a-201ENSMUST00000068156 Akap9Q70FJ1 3797 aa4.03□□□□□ -1.76
Vps13a-201ENSMUST00000068156 Usp24B1AY13 2617 aaKnown RBP4.02□□□□□ -1.77
Vps13a-201ENSMUST00000068156 Cox6b2Q80ZN9 88 aa4.02□□□□□ -1.77
Vps13a-201ENSMUST00000068156 Pla2g10Q9QXX3 151 aa4.02□□□□□ -1.77
Vps13a-201ENSMUST00000068156 Gcn1E9PVA8 2671 aaKnown RBP4.01□□□□□ -1.77
Vps13a-201ENSMUST00000068156 Gm20538F6Z9R1 75 aa4□□□□□ -1.77
Vps13a-201ENSMUST00000068156 Dmbt1Q60997 2085 aa3.99□□□□□ -1.77
Vps13a-201ENSMUST00000068156 Trank1Q8BV79 2999 aa3.98□□□□□ -1.77
Vps13a-201ENSMUST00000068156 D6Ertd527eA0A0N4SWI3 464 aa3.97□□□□□ -1.77
Vps13a-201ENSMUST00000068156 Romo1P60603 79 aa3.97□□□□□ -1.77
Vps13a-201ENSMUST00000068156 Mast4Q811L6 2618 aa3.97□□□□□ -1.77
Vps13a-201ENSMUST00000068156 1700042G07RikB1AUF7 90 aa3.96□□□□□ -1.78
Vps13a-201ENSMUST00000068156 Usp9yF8VPU6 2556 aa3.96□□□□□ -1.78
Vps13a-201ENSMUST00000068156 NipblQ6KCD5 2798 aaKnown RBP3.96□□□□□ -1.78
Vps13a-201ENSMUST00000068156 NbeaQ9EPN1 2936 aa3.95□□□□□ -1.78
Vps13a-201ENSMUST00000068156 Gm19426M0QWC7 77 aa3.95□□□□□ -1.78
Vps13a-201ENSMUST00000068156 Camk2n1Q6QWF9 78 aa3.95□□□□□ -1.78
Vps13a-201ENSMUST00000068156 Itpr1P11881 2749 aa3.94□□□□□ -1.78
Vps13a-201ENSMUST00000068156 Map1aQ9QYR6 2776 aa3.93□□□□□ -1.78
Vps13a-201ENSMUST00000068156 Myo18bE9PV66 2605 aa3.93□□□□□ -1.78
Vps13a-201ENSMUST00000068156 Prrc2cQ3TLH4 2846 aaKnown RBP3.93□□□□□ -1.78
Vps13a-201ENSMUST00000068156 Smg1Q8BKX6 3658 aaKnown RBP3.91□□□□□ -1.78
Vps13a-201ENSMUST00000068156 Notch1Q01705 2531 aa3.91□□□□□ -1.78
Vps13a-201ENSMUST00000068156 Ankrd11E9Q4F7 2643 aa3.91□□□□□ -1.78
Vps13a-201ENSMUST00000068156 Gm10382Q3V0T5 144 aa3.91□□□□□ -1.78
Vps13a-201ENSMUST00000068156 PolqQ8CGS6 2544 aa3.9□□□□□ -1.78
Vps13a-201ENSMUST00000068156 Svep1A2AVA0 3567 aa3.9□□□□□ -1.78
Vps13a-201ENSMUST00000068156 Gm5965D3Z724 196 aa3.9□□□□□ -1.78
Vps13a-201ENSMUST00000068156 Lama5Q61001 3718 aa3.89□□□□□ -1.79
Retrieved 100 of 22,080 RNA–protein pairs in 65 ms