RNA–Protein interactions for RNA: ENSMUST00000068156.7

Vps13a-201, Transcript of Vacuolar protein sorting-associated protein 13A, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Vps13a, Length 10,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13a-201ENSMUST00000068156 Rhox8Q6VSS7 320 aa12.99□□□□□ -0.33
Vps13a-201ENSMUST00000068156 NischQ80TM9 1593 aa11.95□□□□□ -0.5
Vps13a-201ENSMUST00000068156 Ccdc136Q3TVA9 1136 aa11.65□□□□□ -0.54
Vps13a-201ENSMUST00000068156 Rpgrip1Q9EPQ2 1331 aa11.63□□□□□ -0.55
Vps13a-201ENSMUST00000068156 Esf1Q3V1V3 845 aaKnown RBP11.51□□□□□ -0.57
Vps13a-201ENSMUST00000068156 Trim41Q5NCC3 630 aa11.5□□□□□ -0.57
Vps13a-201ENSMUST00000068156 Cngb1E1AZ71 1325 aa11.43□□□□□ -0.58
Vps13a-201ENSMUST00000068156 Ehmt2Q9Z148 1263 aaKnown RBP11.38□□□□□ -0.59
Vps13a-201ENSMUST00000068156 Abcc9P70170 1546 aa11.27□□□□□ -0.6
Vps13a-201ENSMUST00000068156 Gab3Q8BSM5 595 aa11.26□□□□□ -0.61
Vps13a-201ENSMUST00000068156 Npm2Q80W85 207 aa11.19□□□□□ -0.62
Vps13a-201ENSMUST00000068156 Zeb1Q64318 1117 aa11.14□□□□□ -0.63
Vps13a-201ENSMUST00000068156 HrcG5E8J6 738 aa11.09□□□□□ -0.63
Vps13a-201ENSMUST00000068156 Las1lA2BE28 776 aaKnown RBP11.09□□□□□ -0.63
Vps13a-201ENSMUST00000068156 Myt1lP97500 1187 aa11.05□□□□□ -0.64
Vps13a-201ENSMUST00000068156 Abcc8B2RUS7 1588 aa11.04□□□□□ -0.64
Vps13a-201ENSMUST00000068156 Ccdc180J3QNE4 1664 aa10.99□□□□□ -0.65
Vps13a-201ENSMUST00000068156 Wdr66E9Q743 1299 aa10.99□□□□□ -0.65
Vps13a-201ENSMUST00000068156 Ube2uB1AUC4 352 aa10.96□□□□□ -0.65
Vps13a-201ENSMUST00000068156 Zcchc6Q5BLK4 1491 aaKnown RBP10.95□□□□□ -0.66
Vps13a-201ENSMUST00000068156 Acin1Q9JIX8 1338 aaKnown RBP10.92□□□□□ -0.66
Vps13a-201ENSMUST00000068156 NefmP08553 848 aa10.84□□□□□ -0.67
Vps13a-201ENSMUST00000068156 UbtfP25976 765 aaKnown RBP10.82□□□□□ -0.68
Vps13a-201ENSMUST00000068156 Gm35339A0A140LHH9 1649 aa10.82□□□□□ -0.68
Vps13a-201ENSMUST00000068156 Il27Q8K3I6 234 aa10.81□□□□□ -0.68
Vps13a-201ENSMUST00000068156 Rtl1Q7M732 1744 aa10.81□□□□□ -0.68
Vps13a-201ENSMUST00000068156 Ap3b1Q9Z1T1 1105 aa10.55□□□□□ -0.72
Vps13a-201ENSMUST00000068156 Npm1Q61937 292 aaKnown RBP10.54□□□□□ -0.72
Vps13a-201ENSMUST00000068156 Brd4Q9ESU6 1400 aaKnown RBP10.53□□□□□ -0.72
Vps13a-201ENSMUST00000068156 Stra8P70278 393 aa10.52□□□□□ -0.73
Vps13a-201ENSMUST00000068156 Fam50aQ9WV03 339 aaKnown RBP10.49□□□□□ -0.73
Vps13a-201ENSMUST00000068156 Pelp1Q9DBD5 1123 aaKnown RBP10.49□□□□□ -0.73
Vps13a-201ENSMUST00000068156 Rb1cc1Q9ESK9 1588 aa10.46□□□□□ -0.74
Vps13a-201ENSMUST00000068156 Pcgf6Q99NA9 353 aa10.45□□□□□ -0.74
Vps13a-201ENSMUST00000068156 Dcaf1Q80TR8 1506 aa10.45□□□□□ -0.74
Vps13a-201ENSMUST00000068156 NacadQ5SWP3 1504 aa10.45□□□□□ -0.74
Vps13a-201ENSMUST00000068156 Chic1Q8CBW7 227 aa10.42□□□□□ -0.74
Vps13a-201ENSMUST00000068156 Cdk11bP24788 784 aaKnown RBP10.41□□□□□ -0.74
Vps13a-201ENSMUST00000068156 Mier1Q5UAK0 511 aa10.4□□□□□ -0.74
Vps13a-201ENSMUST00000068156 Cep164Q5DU05 1446 aa10.4□□□□□ -0.74
Vps13a-201ENSMUST00000068156 TonslQ6NZL6 1363 aa10.39□□□□□ -0.75
Vps13a-201ENSMUST00000068156 NclP09405 707 aaKnown RBP10.38□□□□□ -0.75
Vps13a-201ENSMUST00000068156 CenpbP27790 599 aa10.34□□□□□ -0.75
Vps13a-201ENSMUST00000068156 Plekhg3Q4VAC9 1341 aa10.33□□□□□ -0.76
Vps13a-201ENSMUST00000068156 Slc24a1Q91WD8 1130 aa10.33□□□□□ -0.76
Vps13a-201ENSMUST00000068156 Lmod2Q3UHZ5 550 aa10.33□□□□□ -0.76
Vps13a-201ENSMUST00000068156 Neurod1Q60867 357 aa10.31□□□□□ -0.76
Vps13a-201ENSMUST00000068156 Ubl4bQ9CQ84 188 aa10.31□□□□□ -0.76
Vps13a-201ENSMUST00000068156 Nop58Q6DFW4 536 aaKnown RBP10.3□□□□□ -0.76
Vps13a-201ENSMUST00000068156 Baz1aO88379 1555 aa10.3□□□□□ -0.76
Vps13a-201ENSMUST00000068156 Anp32bQ9EST5 272 aaKnown RBP10.28□□□□□ -0.76
Vps13a-201ENSMUST00000068156 Supt5hO55201 1082 aaKnown RBP10.27□□□□□ -0.76
Vps13a-201ENSMUST00000068156 NrdcQ8BHG1 1161 aa10.25□□□□□ -0.77
Vps13a-201ENSMUST00000068156 Tnnt3Q9QZ47 272 aa10.24□□□□□ -0.77
Vps13a-201ENSMUST00000068156 Clip1Q922J3 1391 aa10.23□□□□□ -0.77
Vps13a-201ENSMUST00000068156 Ppargc1bQ8VHJ7 1014 aa10.22□□□□□ -0.77
Vps13a-201ENSMUST00000068156 Os9Q8K2C7 672 aa10.2□□□□□ -0.78
Vps13a-201ENSMUST00000068156 Kdm5dQ62240 1548 aa10.19□□□□□ -0.78
Vps13a-201ENSMUST00000068156 Golga3P55937 1487 aa10.17□□□□□ -0.78
Vps13a-201ENSMUST00000068156 ClspnQ80YR7 1315 aa10.14□□□□□ -0.79
Vps13a-201ENSMUST00000068156 Ccer2J3QPU5 274 aa10.13□□□□□ -0.79
Vps13a-201ENSMUST00000068156 Zbtb7cQ8VCZ7 619 aa10.11□□□□□ -0.79
Vps13a-201ENSMUST00000068156 Eid3Q3V124 375 aa10.09□□□□□ -0.79
Vps13a-201ENSMUST00000068156 Hnrnpul2Q00PI9 745 aaKnown RBP10.09□□□□□ -0.79
Vps13a-201ENSMUST00000068156 Rsf1E9PWW9 1441 aaKnown RBP10.08□□□□□ -0.8
Vps13a-201ENSMUST00000068156 Fkbp15Q6P9Q6 1216 aaKnown RBP10.07□□□□□ -0.8
Vps13a-201ENSMUST00000068156 Hdac5Q9Z2V6 1113 aa10.07□□□□□ -0.8
Vps13a-201ENSMUST00000068156 Eif5bQ05D44 1216 aaKnown RBP10.07□□□□□ -0.8
Vps13a-201ENSMUST00000068156 Ifnlr1Q8CGK5 535 aa10.06□□□□□ -0.8
Vps13a-201ENSMUST00000068156 Kif15Q6P9L6 1387 aa10.06□□□□□ -0.8
Vps13a-201ENSMUST00000068156 NeflP08551 543 aa10.05□□□□□ -0.8
Vps13a-201ENSMUST00000068156 BlmO88700 1416 aa10.04□□□□□ -0.8
Vps13a-201ENSMUST00000068156 Setd5Q5XJV7 1441 aa10.03□□□□□ -0.8
Vps13a-201ENSMUST00000068156 Ercc6F8VPZ5 1481 aa10.02□□□□□ -0.81
Vps13a-201ENSMUST00000068156 Crybg2B7ZCC2 1516 aa10.02□□□□□ -0.81
Vps13a-201ENSMUST00000068156 Sall2Q9QX96 1004 aa10.01□□□□□ -0.81
Vps13a-201ENSMUST00000068156 Ccdc18Q640L5 1455 aa9.99□□□□□ -0.81
Vps13a-201ENSMUST00000068156 Sycp2Q9CUU3 1500 aa9.98□□□□□ -0.81
Vps13a-201ENSMUST00000068156 Pds5bQ4VA53 1446 aaKnown RBP9.98□□□□□ -0.81
Vps13a-201ENSMUST00000068156 Chic2Q9D9G3 165 aa9.97□□□□□ -0.81
Vps13a-201ENSMUST00000068156 Eea1Q8BL66 1411 aa9.95□□□□□ -0.82
Vps13a-201ENSMUST00000068156 Gm13697A2AK42 830 aa9.95□□□□□ -0.82
Vps13a-201ENSMUST00000068156 Clstn2Q9ER65 966 aa9.94□□□□□ -0.82
Vps13a-201ENSMUST00000068156 Erich6D3Z6S9 713 aa9.93□□□□□ -0.82
Vps13a-201ENSMUST00000068156 Mapk8ip2Q9ERE9 830 aa9.91□□□□□ -0.82
Vps13a-201ENSMUST00000068156 Zbtb4Q5F293 982 aa9.89□□□□□ -0.83
Vps13a-201ENSMUST00000068156 Myt1Q8CFC2 1127 aa9.89□□□□□ -0.83
Vps13a-201ENSMUST00000068156 Atp1b4Q99ME6 356 aa9.89□□□□□ -0.83
Vps13a-201ENSMUST00000068156 Fmn1Q05860 1466 aa9.88□□□□□ -0.83
Vps13a-201ENSMUST00000068156 Ccdc88bQ4QRL3 1481 aa9.87□□□□□ -0.83
Vps13a-201ENSMUST00000068156 Arhgap27A2AB59 869 aa9.85□□□□□ -0.83
Vps13a-201ENSMUST00000068156 CftrP26361 1476 aa9.85□□□□□ -0.83
Vps13a-201ENSMUST00000068156 Rtl5Q5DTT4 599 aa9.84□□□□□ -0.83
Vps13a-201ENSMUST00000068156 Anks4bQ8K3X6 423 aa9.83□□□□□ -0.84
Vps13a-201ENSMUST00000068156 Cecr2E9Q2Z1 1453 aa9.83□□□□□ -0.84
Vps13a-201ENSMUST00000068156 Amer1Q7TS75 1132 aa9.81□□□□□ -0.84
Vps13a-201ENSMUST00000068156 Nlrp6Q91WS2 869 aa9.81□□□□□ -0.84
Vps13a-201ENSMUST00000068156 Cep162Q6ZQ06 1403 aa9.81□□□□□ -0.84
Vps13a-201ENSMUST00000068156 Anp32aO35381 247 aa9.8□□□□□ -0.84
Vps13a-201ENSMUST00000068156 Gm13695A2AK44 830 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms