RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Gm17606F6ZL36 78 aa7.49□□□□□ -1.21
Pcif1-201ENSMUST00000041643 Myo15aQ9QZZ4 3511 aa7.48□□□□□ -1.21
Pcif1-201ENSMUST00000041643 7530416G11RikJ3QJX6 159 aa7.48□□□□□ -1.21
Pcif1-201ENSMUST00000041643 Gm10337F7DEP7 55 aa7.47□□□□□ -1.21
Pcif1-201ENSMUST00000041643 BptfA2A654 3036 aaKnown RBP7.47□□□□□ -1.21
Pcif1-201ENSMUST00000041643 Gm10197F6QEY5 67 aa7.46□□□□□ -1.21
Pcif1-201ENSMUST00000041643 H2al1kJ3QP08 105 aa7.46□□□□□ -1.22
Pcif1-201ENSMUST00000041643 Cypt15B1AXS0 87 aa7.46□□□□□ -1.22
Pcif1-201ENSMUST00000041643 Stab1Q8R4Y4 2571 aa7.46□□□□□ -1.22
Pcif1-201ENSMUST00000041643 Sprr1aQ62266 144 aa7.46□□□□□ -1.22
Pcif1-201ENSMUST00000041643 H2al1mQ9DAD9 105 aa7.46□□□□□ -1.22
Pcif1-201ENSMUST00000041643 FryE9Q8I9 3020 aa7.45□□□□□ -1.22
Pcif1-201ENSMUST00000041643 Gm10320E9PW43 113 aa7.44□□□□□ -1.22
Pcif1-201ENSMUST00000041643 Cypt14J3QPF7 87 aa7.44□□□□□ -1.22
Pcif1-201ENSMUST00000041643 4930507D05RikQ8C9C9 103 aa7.44□□□□□ -1.22
Pcif1-201ENSMUST00000041643 Akap13E9Q394 2776 aa7.44□□□□□ -1.22
Pcif1-201ENSMUST00000041643 Q8BGJ3 129 aa7.43□□□□□ -1.22
Pcif1-201ENSMUST00000041643 Celsr1O35161 3034 aa7.43□□□□□ -1.22
Pcif1-201ENSMUST00000041643 Muc2Q80Z19 2680 aa7.42□□□□□ -1.22
Pcif1-201ENSMUST00000041643 Defb1P56386 69 aa7.42□□□□□ -1.22
Pcif1-201ENSMUST00000041643 Kmt2bO08550 2713 aa7.41□□□□□ -1.22
Pcif1-201ENSMUST00000041643 VcanQ62059 3357 aa7.39□□□□□ -1.23
Pcif1-201ENSMUST00000041643 Gm9507D3Z5T3 223 aa7.39□□□□□ -1.23
Pcif1-201ENSMUST00000041643 Coa5Q99M07 74 aa7.38□□□□□ -1.23
Pcif1-201ENSMUST00000041643 NipblQ6KCD5 2798 aaKnown RBP7.37□□□□□ -1.23
Pcif1-201ENSMUST00000041643 Gm20661K7N787 53 aa7.37□□□□□ -1.23
Pcif1-201ENSMUST00000041643 6030445D17RikE9Q8F9 148 aa7.36□□□□□ -1.23
Pcif1-201ENSMUST00000041643 Prr13Q9CQJ5 137 aa7.36□□□□□ -1.23
Pcif1-201ENSMUST00000041643 NbeaQ9EPN1 2936 aa7.36□□□□□ -1.23
Pcif1-201ENSMUST00000041643 Dmxl2Q8BPN8 3032 aa7.36□□□□□ -1.23
Pcif1-201ENSMUST00000041643 Gm10139O88245 57 aa7.35□□□□□ -1.23
Pcif1-201ENSMUST00000041643 Vps13cQ8BX70 3748 aa7.35□□□□□ -1.23
Pcif1-201ENSMUST00000041643 Chd6A3KFM7 2711 aa7.35□□□□□ -1.23
Pcif1-201ENSMUST00000041643 Dchs2A0A0A6YW72 3346 aa7.34□□□□□ -1.23
Pcif1-201ENSMUST00000041643 Gm26620Q9CY65 116 aa7.34□□□□□ -1.23
Pcif1-201ENSMUST00000041643 Spint4Q9D263 159 aa7.33□□□□□ -1.24
Pcif1-201ENSMUST00000041643 Odf3bQ5M8M2 238 aa7.33□□□□□ -1.24
Pcif1-201ENSMUST00000041643 A530084C06RikQ3UTW2 186 aa7.32□□□□□ -1.24
Pcif1-201ENSMUST00000041643 Utp20Q5XG71 2788 aaKnown RBP7.32□□□□□ -1.24
Pcif1-201ENSMUST00000041643 Dchs1E9PVD3 3291 aa7.32□□□□□ -1.24
Pcif1-201ENSMUST00000041643 Fam229bQ8CF36 80 aa7.32□□□□□ -1.24
Pcif1-201ENSMUST00000041643 FasnP19096 2504 aaKnown RBP7.32□□□□□ -1.24
Pcif1-201ENSMUST00000041643 Notch1Q01705 2531 aa7.31□□□□□ -1.24
Pcif1-201ENSMUST00000041643 Adgrg4B7ZCC9 3073 aa7.31□□□□□ -1.24
Pcif1-201ENSMUST00000041643 SpegQ62407 3262 aa7.3□□□□□ -1.24
Pcif1-201ENSMUST00000041643 Krtap29-1A2A5X4 342 aa7.29□□□□□ -1.24
Pcif1-201ENSMUST00000041643 Limd2Q8BGB5 128 aa7.28□□□□□ -1.24
Pcif1-201ENSMUST00000041643 Rps28P62858 69 aaKnown RBP7.27□□□□□ -1.24
Pcif1-201ENSMUST00000041643 Zfhx3Q61329 3726 aa7.27□□□□□ -1.25
Pcif1-201ENSMUST00000041643 Igsf10Q3V1M1 2594 aa7.26□□□□□ -1.25
Pcif1-201ENSMUST00000041643 2310050C09RikG5E8Z3 280 aa7.25□□□□□ -1.25
Pcif1-201ENSMUST00000041643 Rnase13Q5GAM7 153 aa7.25□□□□□ -1.25
Pcif1-201ENSMUST00000041643 RelnQ60841 3461 aa7.25□□□□□ -1.25
Pcif1-201ENSMUST00000041643 Cdc42se1Q8BHL7 80 aa7.24□□□□□ -1.25
Pcif1-201ENSMUST00000041643 2310061N02RikQ9D6S9 174 aa7.23□□□□□ -1.25
Pcif1-201ENSMUST00000041643 Chtf8P0CG14 533 aa7.22□□□□□ -1.25
Pcif1-201ENSMUST00000041643 Krtap10-4Q08EG8 221 aa7.2□□□□□ -1.26
Pcif1-201ENSMUST00000041643 Gm9821Q8K076 103 aa7.2□□□□□ -1.26
Pcif1-201ENSMUST00000041643 Krtap13O88375 197 aa7.2□□□□□ -1.26
Pcif1-201ENSMUST00000041643 Ubr5Q80TP3 2792 aa7.19□□□□□ -1.26
Pcif1-201ENSMUST00000041643 Itpr2Q9Z329 2701 aa7.18□□□□□ -1.26
Pcif1-201ENSMUST00000041643 Fn1P11276 2477 aaKnown RBP7.18□□□□□ -1.26
Pcif1-201ENSMUST00000041643 Tep1P97499 2629 aa7.18□□□□□ -1.26
Pcif1-201ENSMUST00000041643 2310034C09RikQ9D746 214 aa7.15□□□□□ -1.26
Pcif1-201ENSMUST00000041643 Akap9Q70FJ1 3797 aa7.15□□□□□ -1.26
Pcif1-201ENSMUST00000041643 Phxr4P15974 95 aa7.15□□□□□ -1.27
Pcif1-201ENSMUST00000041643 A730071L15RikQ8C4X0 137 aa7.15□□□□□ -1.27
Pcif1-201ENSMUST00000041643 Trank1Q8BV79 2999 aa7.15□□□□□ -1.27
Pcif1-201ENSMUST00000041643 9530053A07RikE9PVG8 2581 aa7.15□□□□□ -1.27
Pcif1-201ENSMUST00000041643 Gm12216A0A1W2P827 62 aa7.13□□□□□ -1.27
Pcif1-201ENSMUST00000041643 Gm884A2A9H6 3643 aa7.12□□□□□ -1.27
Pcif1-201ENSMUST00000041643 Gm16253D3Z167 63 aa7.12□□□□□ -1.27
Pcif1-201ENSMUST00000041643 Gm4491E0CX42 125 aa7.12□□□□□ -1.27
Pcif1-201ENSMUST00000041643 Nbeal2Q6ZQA0 2742 aa7.12□□□□□ -1.27
Pcif1-201ENSMUST00000041643 Uqcr11Q9CPX8 56 aa7.1□□□□□ -1.27
Pcif1-201ENSMUST00000041643 Krtap10-10A0A1W2P7T6 217 aa7.08□□□□□ -1.28
Pcif1-201ENSMUST00000041643 Cystm1Q8K353 104 aa7.08□□□□□ -1.28
Pcif1-201ENSMUST00000041643 Krtap15-1Q9QZU5 150 aa7.08□□□□□ -1.28
Pcif1-201ENSMUST00000041643 Hivep1Q03172 2688 aa7.07□□□□□ -1.28
Pcif1-201ENSMUST00000041643 DspE9Q557 2883 aaKnown RBP7.07□□□□□ -1.28
Pcif1-201ENSMUST00000041643 Igfn1Q3KNY0 2849 aa7.06□□□□□ -1.28
Pcif1-201ENSMUST00000041643 Tenm4Q3UHK6 2771 aa7.06□□□□□ -1.28
Pcif1-201ENSMUST00000041643 Krtap14O08640 167 aa7.05□□□□□ -1.28
Pcif1-201ENSMUST00000041643 Csmd1Q923L3 3564 aa7.05□□□□□ -1.28
Pcif1-201ENSMUST00000041643 Zzef1Q5SSH7 2924 aa7.05□□□□□ -1.28
Pcif1-201ENSMUST00000041643 Gm10643Q3URG9 111 aa7.03□□□□□ -1.28
Pcif1-201ENSMUST00000041643 SpenQ62504 3644 aaKnown RBP7.03□□□□□ -1.28
Pcif1-201ENSMUST00000041643 HrnrQ8VHD8 2496 aa7.02□□□□□ -1.28
Pcif1-201ENSMUST00000041643 Col6a5A6H584 2640 aa7.02□□□□□ -1.29
Pcif1-201ENSMUST00000041643 FlncQ8VHX6 2726 aaKnown RBP7.02□□□□□ -1.29
Pcif1-201ENSMUST00000041643 Gm21798J3QNU5 87 aa7.01□□□□□ -1.29
Pcif1-201ENSMUST00000041643 Zfhx4Q9JJN2 3550 aa7□□□□□ -1.29
Pcif1-201ENSMUST00000041643 Gm37013Q8K491 104 aa6.98□□□□□ -1.29
Pcif1-201ENSMUST00000041643 Gm2696A0A1W2P709 240 aa6.97□□□□□ -1.29
Pcif1-201ENSMUST00000041643 Tenm3Q9WTS6 2715 aa6.96□□□□□ -1.3
Pcif1-201ENSMUST00000041643 Stab2Q8R4U0 2559 aa6.95□□□□□ -1.3
Pcif1-201ENSMUST00000041643 Smg1Q8BKX6 3658 aaKnown RBP6.95□□□□□ -1.3
Pcif1-201ENSMUST00000041643 Tnp2P11378 117 aa6.94□□□□□ -1.3
Pcif1-201ENSMUST00000041643 Gm5767A0A0J9YTU8 78 aa6.93□□□□□ -1.3
Pcif1-201ENSMUST00000041643 Pkd1l1Q8R526 2615 aa6.9□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 66.6 ms