RNA–Protein interactions for RNA: ENSMUST00000025522.10

Pdgfrb-201, Transcript of Platelet-derived growth factor receptor beta, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pdgfrb, Length 5,407 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfrb-201ENSMUST00000025522 Gm5767A0A0J9YTU8 78 aa6.67□□□□□ -1.34
Pdgfrb-201ENSMUST00000025522 CenpfE9Q3P4 2997 aaKnown RBP6.67□□□□□ -1.34
Pdgfrb-201ENSMUST00000025522 Dmbt1Q60997 2085 aa6.66□□□□□ -1.34
Pdgfrb-201ENSMUST00000025522 CriptO70333 101 aa6.66□□□□□ -1.34
Pdgfrb-201ENSMUST00000025522 Fam229bQ8CF36 80 aa6.66□□□□□ -1.34
Pdgfrb-201ENSMUST00000025522 Gm16253D3Z167 63 aa6.64□□□□□ -1.35
Pdgfrb-201ENSMUST00000025522 Nbeal1E9PYP2 2688 aa6.63□□□□□ -1.35
Pdgfrb-201ENSMUST00000025522 Usp24B1AY13 2617 aaKnown RBP6.59□□□□□ -1.35
Pdgfrb-201ENSMUST00000025522 Akap13E9Q394 2776 aa6.58□□□□□ -1.36
Pdgfrb-201ENSMUST00000025522 Notch1Q01705 2531 aa6.58□□□□□ -1.36
Pdgfrb-201ENSMUST00000025522 Gm9508A0A1W2P7W0 230 aa6.55□□□□□ -1.36
Pdgfrb-201ENSMUST00000025522 2310050C09RikG5E8Z3 280 aa6.54□□□□□ -1.36
Pdgfrb-201ENSMUST00000025522 Camk2n1Q6QWF9 78 aa6.53□□□□□ -1.36
Pdgfrb-201ENSMUST00000025522 Krtap13O88375 197 aa6.52□□□□□ -1.37
Pdgfrb-201ENSMUST00000025522 Rps29P62274 56 aa6.51□□□□□ -1.37
Pdgfrb-201ENSMUST00000025522 HttP42859 3119 aa6.51□□□□□ -1.37
Pdgfrb-201ENSMUST00000025522 Gcn1E9PVA8 2671 aaKnown RBP6.51□□□□□ -1.37
Pdgfrb-201ENSMUST00000025522 Stab1Q8R4Y4 2571 aa6.5□□□□□ -1.37
Pdgfrb-201ENSMUST00000025522 Gm19426M0QWC7 77 aa6.48□□□□□ -1.37
Pdgfrb-201ENSMUST00000025522 Gm7173A0A0G2JEB6 3132 aa6.48□□□□□ -1.37
Pdgfrb-201ENSMUST00000025522 Fn1P11276 2477 aaKnown RBP6.48□□□□□ -1.37
Pdgfrb-201ENSMUST00000025522 Gm9507D3Z5T3 223 aa6.47□□□□□ -1.37
Pdgfrb-201ENSMUST00000025522 Cystm1Q8K353 104 aa6.47□□□□□ -1.37
Pdgfrb-201ENSMUST00000025522 Mki67E9PVX6 3177 aaKnown RBP6.46□□□□□ -1.37
Pdgfrb-201ENSMUST00000025522 Igsf10Q3V1M1 2594 aa6.45□□□□□ -1.38
Pdgfrb-201ENSMUST00000025522 Gm3880A0A1B0GSB3 72 aa6.45□□□□□ -1.38
Pdgfrb-201ENSMUST00000025522 2310061N02RikQ9D6S9 174 aa6.43□□□□□ -1.38
Pdgfrb-201ENSMUST00000025522 BC029722A0A0N4SW31 51 aa6.43□□□□□ -1.38
Pdgfrb-201ENSMUST00000025522 Myo15bI7HPW8 3033 aa6.42□□□□□ -1.38
Pdgfrb-201ENSMUST00000025522 Gm37013Q8K491 104 aa6.42□□□□□ -1.38
Pdgfrb-201ENSMUST00000025522 Gm3646F6S692 53 aa6.41□□□□□ -1.38
Pdgfrb-201ENSMUST00000025522 Col12a1Q60847 3120 aa6.4□□□□□ -1.38
Pdgfrb-201ENSMUST00000025522 Prune2Q52KR3 3084 aa6.4□□□□□ -1.38
Pdgfrb-201ENSMUST00000025522 Tnp2P11378 117 aa6.38□□□□□ -1.39
Pdgfrb-201ENSMUST00000025522 Mast4Q811L6 2618 aa6.38□□□□□ -1.39
Pdgfrb-201ENSMUST00000025522 Krtap14O08640 167 aa6.38□□□□□ -1.39
Pdgfrb-201ENSMUST00000025522 SmcpP15265 143 aa6.38□□□□□ -1.39
Pdgfrb-201ENSMUST00000025522 Itpr1P11881 2749 aa6.37□□□□□ -1.39
Pdgfrb-201ENSMUST00000025522 Cdh23Q99PF4 3354 aa6.37□□□□□ -1.39
Pdgfrb-201ENSMUST00000025522 Itpr3P70227 2670 aa6.36□□□□□ -1.39
Pdgfrb-201ENSMUST00000025522 1700042G07RikB1AUF7 90 aa6.34□□□□□ -1.39
Pdgfrb-201ENSMUST00000025522 Tnrc18Q80WC3 2878 aa6.34□□□□□ -1.39
Pdgfrb-201ENSMUST00000025522 Chd7A2AJK6 2986 aaKnown RBP6.32□□□□□ -1.4
Pdgfrb-201ENSMUST00000025522 A730071L15RikQ8C4X0 137 aa6.32□□□□□ -1.4
Pdgfrb-201ENSMUST00000025522 4933415A04RikQ9D443 101 aa6.31□□□□□ -1.4
Pdgfrb-201ENSMUST00000025522 Jbts17Q8CE72 3214 aa6.31□□□□□ -1.4
Pdgfrb-201ENSMUST00000025522 Rev3lQ61493 3122 aa6.31□□□□□ -1.4
Pdgfrb-201ENSMUST00000025522 Krtap10-4Q08EG8 221 aa6.3□□□□□ -1.4
Pdgfrb-201ENSMUST00000025522 NipblQ6KCD5 2798 aaKnown RBP6.29□□□□□ -1.4
Pdgfrb-201ENSMUST00000025522 Rpl37Q9D823 97 aa6.27□□□□□ -1.41
Pdgfrb-201ENSMUST00000025522 Szt2A2A9C3 3431 aa6.27□□□□□ -1.41
Pdgfrb-201ENSMUST00000025522 Gm2310J3QNJ2 377 aa6.24□□□□□ -1.41
Pdgfrb-201ENSMUST00000025522 Krtap10-10A0A1W2P7T6 217 aa6.23□□□□□ -1.41
Pdgfrb-201ENSMUST00000025522 Vps13aQ5H8C4 3166 aa6.23□□□□□ -1.41
Pdgfrb-201ENSMUST00000025522 Tep1P97499 2629 aa6.21□□□□□ -1.42
Pdgfrb-201ENSMUST00000025522 D6Ertd527eA0A0N4SWI3 464 aa6.21□□□□□ -1.42
Pdgfrb-201ENSMUST00000025522 9530053A07RikE9PVG8 2581 aa6.19□□□□□ -1.42
Pdgfrb-201ENSMUST00000025522 MgaA2AWL7 3003 aaKnown RBP6.19□□□□□ -1.42
Pdgfrb-201ENSMUST00000025522 Romo1P60603 79 aa6.17□□□□□ -1.42
Pdgfrb-201ENSMUST00000025522 AtmQ62388 3066 aa6.16□□□□□ -1.42
Pdgfrb-201ENSMUST00000025522 Kmt2bO08550 2713 aa6.14□□□□□ -1.43
Pdgfrb-201ENSMUST00000025522 HrnrQ8VHD8 2496 aa6.14□□□□□ -1.43
Pdgfrb-201ENSMUST00000025522 Unc80Q8BLN6 3261 aa6.13□□□□□ -1.43
Pdgfrb-201ENSMUST00000025522 Gm2696A0A1W2P709 240 aa6.12□□□□□ -1.43
Pdgfrb-201ENSMUST00000025522 Stab2Q8R4U0 2559 aa6.11□□□□□ -1.43
Pdgfrb-201ENSMUST00000025522 Bod1lE9Q6J5 3032 aa6.09□□□□□ -1.43
Pdgfrb-201ENSMUST00000025522 Map1aQ9QYR6 2776 aa6.09□□□□□ -1.43
Pdgfrb-201ENSMUST00000025522 Cfap54Q8C6S9 3106 aa6.08□□□□□ -1.44
Pdgfrb-201ENSMUST00000025522 Itpr2Q9Z329 2701 aa6.08□□□□□ -1.44
Pdgfrb-201ENSMUST00000025522 Cox6b2Q80ZN9 88 aa6.08□□□□□ -1.44
Pdgfrb-201ENSMUST00000025522 KalrnA2CG49 2964 aa6.07□□□□□ -1.44
Pdgfrb-201ENSMUST00000025522 Chd6A3KFM7 2711 aa6.06□□□□□ -1.44
Pdgfrb-201ENSMUST00000025522 A930033H14RikG5E8X6 103 aa6.06□□□□□ -1.44
Pdgfrb-201ENSMUST00000025522 Gm10382Q3V0T5 144 aa6.05□□□□□ -1.44
Pdgfrb-201ENSMUST00000025522 Muc2Q80Z19 2680 aa6.05□□□□□ -1.44
Pdgfrb-201ENSMUST00000025522 Ubr5Q80TP3 2792 aa6.05□□□□□ -1.44
Pdgfrb-201ENSMUST00000025522 Nbeal2Q6ZQA0 2742 aa6.04□□□□□ -1.44
Pdgfrb-201ENSMUST00000025522 Lrrc37aB1AWG4 3215 aa6.04□□□□□ -1.44
Pdgfrb-201ENSMUST00000025522 AspmQ8CJ27 3122 aa6.04□□□□□ -1.44
Pdgfrb-201ENSMUST00000025522 Prrc2cQ3TLH4 2846 aaKnown RBP6.04□□□□□ -1.44
Pdgfrb-201ENSMUST00000025522 Dmxl1Q6PNC0 3013 aa6.03□□□□□ -1.44
Pdgfrb-201ENSMUST00000025522 Fbn2Q61555 2907 aa6.03□□□□□ -1.44
Pdgfrb-201ENSMUST00000025522 Col6a5A6H584 2640 aa6.02□□□□□ -1.45
Pdgfrb-201ENSMUST00000025522 Pkd1l1Q8R526 2615 aa6□□□□□ -1.45
Pdgfrb-201ENSMUST00000025522 Gm5965D3Z724 196 aa5.99□□□□□ -1.45
Pdgfrb-201ENSMUST00000025522 FcgbpE9Q0B5 2583 aa5.98□□□□□ -1.45
Pdgfrb-201ENSMUST00000025522 Ranbp2Q9ERU9 3053 aaKnown RBP5.98□□□□□ -1.45
Pdgfrb-201ENSMUST00000025522 Tenm4Q3UHK6 2771 aa5.97□□□□□ -1.45
Pdgfrb-201ENSMUST00000025522 Brca2P97929 3329 aa5.96□□□□□ -1.46
Pdgfrb-201ENSMUST00000025522 Hivep1Q03172 2688 aa5.96□□□□□ -1.46
Pdgfrb-201ENSMUST00000025522 Col6a3E9PWQ3 3284 aa5.95□□□□□ -1.46
Pdgfrb-201ENSMUST00000025522 FrylF8VQ05 3007 aa5.95□□□□□ -1.46
Pdgfrb-201ENSMUST00000025522 Frem2Q6NVD0 3160 aa5.93□□□□□ -1.46
Pdgfrb-201ENSMUST00000025522 Lama1P19137 3084 aa5.93□□□□□ -1.46
Pdgfrb-201ENSMUST00000025522 Gm21887J3QQ04 176 aa5.93□□□□□ -1.46
Pdgfrb-201ENSMUST00000025522 2310057N15RikQ9D6T8 200 aa5.93□□□□□ -1.46
Pdgfrb-201ENSMUST00000025522 Igfn1Q3KNY0 2849 aa5.91□□□□□ -1.46
Pdgfrb-201ENSMUST00000025522 BptfA2A654 3036 aaKnown RBP5.9□□□□□ -1.46
Pdgfrb-201ENSMUST00000025522 Wdfy4E9Q2M9 3149 aa5.88□□□□□ -1.47
Pdgfrb-201ENSMUST00000025522 Ash1lQ99MY8 2958 aa5.88□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms