RNA–Protein interactions for RNA: ENSMUST00000019982.8

Gtf3c6-201, Transcript of General transcription factor 3C polypeptide 6, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Gtf3c6, Length 887 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6-201ENSMUST00000019982 Hist1h2bkQ8CGP1 126 aaKnown RBP6.32□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 Hist1h2bpQ8CGP2 126 aaKnown RBP6.32□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 Glrp1E9Q9S8 174 aa6.31□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 S100a8P27005 89 aa6.31□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 Igkv1-122A0A140T8M9 119 aa6.3□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 Gm19668J3QMD1 248 aa6.3□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 Elof1P60003 83 aa6.3□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 Cops9Q3U898 57 aa6.3□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 Dpm2Q9Z324 84 aa6.3□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 Trav4d-3A0A075B625 110 aa6.29□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 Gm5767A0A0J9YTU8 78 aa6.29□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 MalO09198 153 aa6.29□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 Rpl32-psP17932 135 aa6.29□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 Rps29P62274 56 aa6.29□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 SnrpeP62305 92 aaKnown RBP6.29□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 Hist2h2beQ64524 126 aa6.29□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 A930002H24RikQ8C8Y3 163 aa6.29□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 Gm10295Q8CCF3 114 aa6.29□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 Lage3Q9CR70 148 aa6.29□□□□□ -1.4
Gtf3c6-201ENSMUST00000019982 Trav13n-2A0A0G2JF93 110 aa6.27□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Igkv4-58A0A0G2JGI6 119 aa6.27□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Ndufv3Q8BK30 104 aaKnown RBP6.27□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Dph3Q8K0W9 82 aa6.27□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Hbb-bsA8DUK4 147 aa6.26□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Hbb-b1P02088 147 aa6.26□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Plscr4P58196 326 aa6.26□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Defb37Q7TMD2 62 aa6.26□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Gnb1lQ9EQ15 326 aa6.26□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Tmem243B2RVB9 118 aa6.25□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 5930422O12RikQ8C4Y4 123 aa6.25□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Cend1Q9JKC6 149 aa6.25□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Scgb1b10A0A087WPW0 93 aa6.24□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Vpreb3D3Z6J4 130 aa6.24□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Gm10320E9PW43 113 aa6.24□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Hint1P70349 126 aaKnown RBP6.24□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Syne2Q6ZWQ0 6874 aaKnown RBP6.23□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Trappc1Q5NCF2 145 aa6.23□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Defb29Q8BGW9 78 aa6.23□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Xlr5cQ9JJR2 179 aa6.23□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 A0A286YE02 88 aa6.22□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Gm2310J3QNJ2 377 aa6.22□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Lamtor3O88653 124 aa6.22□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Smim1P0C8K7 78 aa6.22□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Gm5142Q8C5X9 133 aa6.22□□□□□ -1.41
Gtf3c6-201ENSMUST00000019982 Prr13Q9CQJ5 137 aa6.21□□□□□ -1.42
Gtf3c6-201ENSMUST00000019982 Defb45Q3V490 66 aa6.2□□□□□ -1.42
Gtf3c6-201ENSMUST00000019982 Eif4ebp3Q80VV3 101 aa6.2□□□□□ -1.42
Gtf3c6-201ENSMUST00000019982 Gm5868Q8BJG1 145 aa6.2□□□□□ -1.42
Gtf3c6-201ENSMUST00000019982 BC107364E9Q5A2 140 aa6.19□□□□□ -1.42
Gtf3c6-201ENSMUST00000019982 A830005F24RikQ8BRT5 167 aa6.19□□□□□ -1.42
Gtf3c6-201ENSMUST00000019982 Gm9821Q8K076 103 aa6.19□□□□□ -1.42
Gtf3c6-201ENSMUST00000019982 Dnal4Q9DCM4 105 aa6.19□□□□□ -1.42
Gtf3c6-201ENSMUST00000019982 SelenowP63300 88 aa6.18□□□□□ -1.42
Gtf3c6-201ENSMUST00000019982 H2al1nQ497L1 109 aa6.17□□□□□ -1.42
Gtf3c6-201ENSMUST00000019982 Ighv10-1A0A0B4J1J6 119 aa6.16□□□□□ -1.42
Gtf3c6-201ENSMUST00000019982 Igkv3-4A0A140T8Q4 119 aa6.16□□□□□ -1.42
Gtf3c6-201ENSMUST00000019982 Gm21886J3QJU9 214 aa6.16□□□□□ -1.42
Gtf3c6-201ENSMUST00000019982 P0C913 63 aa6.16□□□□□ -1.42
Gtf3c6-201ENSMUST00000019982 Krtap15-1Q9QZU5 150 aa6.16□□□□□ -1.42
Gtf3c6-201ENSMUST00000019982 Vmn1r197Q8R265 298 aa6.15□□□□□ -1.42
Gtf3c6-201ENSMUST00000019982 Krtap19-3Q925H6 87 aa6.15□□□□□ -1.42
Gtf3c6-201ENSMUST00000019982 Smim26Q3V460 107 aa6.14□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 IqcjQ8BPW0 110 aa6.14□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 Vamp8O70404 101 aa6.13□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 Q8BT88 171 aa6.13□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 2310034C09RikQ9D746 214 aa6.13□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 Gm10401E9Q3K6 71 aa6.12□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 Krtap16-3Q8C1I6 86 aa6.12□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 Krtap19-1Q925H2 87 aa6.12□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 Sec61bQ9CQS8 96 aaKnown RBP6.12□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 Gm37389A0A0A6YW05 95 aa6.11□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 S100a1P56565 94 aa6.11□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 A730071L15RikQ8C4X0 137 aa6.11□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 Pam16Q9CQV1 125 aa6.11□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 Gm11596B1AQB0 205 aa6.1□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 Gm16253D3Z167 63 aa6.1□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 Rpl39lQ9CQD0 51 aa6.1□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 4930535I16RikQ9CUI2 172 aa6.1□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 Uqcc3Q8K2T4 89 aa6.09□□□□□ -1.43
Gtf3c6-201ENSMUST00000019982 Rab37Q9JKM7 223 aa6.08□□□□□ -1.44
Gtf3c6-201ENSMUST00000019982 Cited4Q9WUL8 182 aa6.08□□□□□ -1.44
Gtf3c6-201ENSMUST00000019982 Igkv8-21A0A140T8P7 120 aa6.07□□□□□ -1.44
Gtf3c6-201ENSMUST00000019982 1700018G05RikA0A1B0GSI2 66 aa6.07□□□□□ -1.44
Gtf3c6-201ENSMUST00000019982 Gemin7Q9CWY4 129 aa6.07□□□□□ -1.44
Gtf3c6-201ENSMUST00000019982 Trav3-4A0A075B654 114 aa6.06□□□□□ -1.44
Gtf3c6-201ENSMUST00000019982 P06320 134 aa6.06□□□□□ -1.44
Gtf3c6-201ENSMUST00000019982 Igkv1-35A0A0G2JDE5 120 aa6.05□□□□□ -1.44
Gtf3c6-201ENSMUST00000019982 Tal2Q62282 108 aa6.05□□□□□ -1.44
Gtf3c6-201ENSMUST00000019982 SspoQ8CG65 4998 aa6.05□□□□□ -1.44
Gtf3c6-201ENSMUST00000019982 Chchd10Q7TNL9 138 aa6.04□□□□□ -1.44
Gtf3c6-201ENSMUST00000019982 Igkv2-109A0A075B5K6 120 aa6.03□□□□□ -1.44
Gtf3c6-201ENSMUST00000019982 1700042G07RikB1AUF7 90 aa6.03□□□□□ -1.44
Gtf3c6-201ENSMUST00000019982 CckP09240 115 aa6.03□□□□□ -1.44
Gtf3c6-201ENSMUST00000019982 Igkv8-28A0A0G2JE47 121 aa6.02□□□□□ -1.45
Gtf3c6-201ENSMUST00000019982 Gm16381A0A1Y7VKT9 73 aa6.02□□□□□ -1.45
Gtf3c6-201ENSMUST00000019982 Sigmar1O55242 223 aa6□□□□□ -1.45
Gtf3c6-201ENSMUST00000019982 Krtap1-4Q3V2D6 188 aa6□□□□□ -1.45
Gtf3c6-201ENSMUST00000019982 G0s2Q61585 103 aa5.99□□□□□ -1.45
Gtf3c6-201ENSMUST00000019982 Lce1a1Q9CQH5 143 aa5.98□□□□□ -1.45
Gtf3c6-201ENSMUST00000019982 Ctxnd2A0A1B0GQX3 59 aa5.97□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms