RNA–Protein interactions for RNA: ENSMUST00000002198.3

Sf3a1-201, Transcript of Splicing factor 3A subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3a1, Length 4,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1-201ENSMUST00000002198 Gm10139O88245 57 aa8.97□□□□□ -0.97
Sf3a1-201ENSMUST00000002198 Akap13E9Q394 2776 aa8.96□□□□□ -0.97
Sf3a1-201ENSMUST00000002198 Utp20Q5XG71 2788 aaKnown RBP8.96□□□□□ -0.98
Sf3a1-201ENSMUST00000002198 Smim29Q8R043 75 aa8.96□□□□□ -0.98
Sf3a1-201ENSMUST00000002198 Gm10337F7DEP7 55 aa8.95□□□□□ -0.98
Sf3a1-201ENSMUST00000002198 Dmxl2Q8BPN8 3032 aa8.95□□□□□ -0.98
Sf3a1-201ENSMUST00000002198 Notch1Q01705 2531 aa8.94□□□□□ -0.98
Sf3a1-201ENSMUST00000002198 FryE9Q8I9 3020 aa8.92□□□□□ -0.98
Sf3a1-201ENSMUST00000002198 FasnP19096 2504 aaKnown RBP8.92□□□□□ -0.98
Sf3a1-201ENSMUST00000002198 Cypt15B1AXS0 87 aa8.91□□□□□ -0.98
Sf3a1-201ENSMUST00000002198 Defb38Q7TNV7 63 aa8.91□□□□□ -0.98
Sf3a1-201ENSMUST00000002198 Wdfy3Q6VNB8 3508 aa8.9□□□□□ -0.98
Sf3a1-201ENSMUST00000002198 RetnlbQ99P86 105 aa8.89□□□□□ -0.99
Sf3a1-201ENSMUST00000002198 4930507D05RikQ8C9C9 103 aa8.88□□□□□ -0.99
Sf3a1-201ENSMUST00000002198 Odf3bQ5M8M2 238 aa8.87□□□□□ -0.99
Sf3a1-201ENSMUST00000002198 Krtap29-1A2A5X4 342 aa8.86□□□□□ -0.99
Sf3a1-201ENSMUST00000002198 6030445D17RikE9Q8F9 148 aa8.86□□□□□ -0.99
Sf3a1-201ENSMUST00000002198 Prr13Q9CQJ5 137 aa8.86□□□□□ -0.99
Sf3a1-201ENSMUST00000002198 Limd2Q8BGB5 128 aa8.86□□□□□ -0.99
Sf3a1-201ENSMUST00000002198 Trank1Q8BV79 2999 aa8.86□□□□□ -0.99
Sf3a1-201ENSMUST00000002198 Gm10197F6QEY5 67 aa8.85□□□□□ -0.99
Sf3a1-201ENSMUST00000002198 9230102O04RikA2ASX7 82 aa8.85□□□□□ -0.99
Sf3a1-201ENSMUST00000002198 Fn1P11276 2477 aaKnown RBP8.84□□□□□ -0.99
Sf3a1-201ENSMUST00000002198 Cdc42se1Q8BHL7 80 aa8.84□□□□□ -0.99
Sf3a1-201ENSMUST00000002198 Itpr2Q9Z329 2701 aa8.83□□□□□ -1
Sf3a1-201ENSMUST00000002198 Adgrg4B7ZCC9 3073 aa8.83□□□□□ -1
Sf3a1-201ENSMUST00000002198 2310061N02RikQ9D6S9 174 aa8.83□□□□□ -1
Sf3a1-201ENSMUST00000002198 Spint4Q9D263 159 aa8.82□□□□□ -1
Sf3a1-201ENSMUST00000002198 Coa5Q99M07 74 aa8.81□□□□□ -1
Sf3a1-201ENSMUST00000002198 Igsf10Q3V1M1 2594 aa8.81□□□□□ -1
Sf3a1-201ENSMUST00000002198 Gm10999F6Q4M4 69 aa8.8□□□□□ -1
Sf3a1-201ENSMUST00000002198 Gm26620Q9CY65 116 aa8.8□□□□□ -1
Sf3a1-201ENSMUST00000002198 Celsr1O35161 3034 aa8.8□□□□□ -1
Sf3a1-201ENSMUST00000002198 Anapc11Q9CPX9 84 aa8.78□□□□□ -1
Sf3a1-201ENSMUST00000002198 FlncQ8VHX6 2726 aaKnown RBP8.78□□□□□ -1
Sf3a1-201ENSMUST00000002198 9530053A07RikE9PVG8 2581 aa8.77□□□□□ -1.01
Sf3a1-201ENSMUST00000002198 DspE9Q557 2883 aaKnown RBP8.76□□□□□ -1.01
Sf3a1-201ENSMUST00000002198 A730071L15RikQ8C4X0 137 aa8.76□□□□□ -1.01
Sf3a1-201ENSMUST00000002198 Ndufs5Q99LY9 106 aa8.76□□□□□ -1.01
Sf3a1-201ENSMUST00000002198 Gm10643Q3URG9 111 aa8.75□□□□□ -1.01
Sf3a1-201ENSMUST00000002198 Zzef1Q5SSH7 2924 aa8.75□□□□□ -1.01
Sf3a1-201ENSMUST00000002198 Celsr3Q91ZI0 3301 aa8.74□□□□□ -1.01
Sf3a1-201ENSMUST00000002198 SvipQ3UZP4 77 aa8.73□□□□□ -1.01
Sf3a1-201ENSMUST00000002198 Gm37013Q8K491 104 aa8.73□□□□□ -1.01
Sf3a1-201ENSMUST00000002198 A530084C06RikQ3UTW2 186 aa8.73□□□□□ -1.01
Sf3a1-201ENSMUST00000002198 H2al1kJ3QP08 105 aa8.72□□□□□ -1.01
Sf3a1-201ENSMUST00000002198 Gm17606F6ZL36 78 aa8.72□□□□□ -1.01
Sf3a1-201ENSMUST00000002198 Brca2P97929 3329 aa8.71□□□□□ -1.01
Sf3a1-201ENSMUST00000002198 Gm16253D3Z167 63 aa8.71□□□□□ -1.01
Sf3a1-201ENSMUST00000002198 Q8BGJ3 129 aa8.71□□□□□ -1.01
Sf3a1-201ENSMUST00000002198 DmdP11531 3678 aa8.7□□□□□ -1.02
Sf3a1-201ENSMUST00000002198 Gm20661K7N787 53 aa8.69□□□□□ -1.02
Sf3a1-201ENSMUST00000002198 Fam229bQ8CF36 80 aa8.68□□□□□ -1.02
Sf3a1-201ENSMUST00000002198 Phxr4P15974 95 aa8.67□□□□□ -1.02
Sf3a1-201ENSMUST00000002198 Col6a5A6H584 2640 aa8.64□□□□□ -1.03
Sf3a1-201ENSMUST00000002198 Vps13cQ8BX70 3748 aa8.64□□□□□ -1.03
Sf3a1-201ENSMUST00000002198 Hivep1Q03172 2688 aa8.64□□□□□ -1.03
Sf3a1-201ENSMUST00000002198 Chtf8P0CG14 533 aa8.63□□□□□ -1.03
Sf3a1-201ENSMUST00000002198 Uqcr11Q9CPX8 56 aa8.63□□□□□ -1.03
Sf3a1-201ENSMUST00000002198 2310050C09RikG5E8Z3 280 aa8.63□□□□□ -1.03
Sf3a1-201ENSMUST00000002198 Gm9508A0A1W2P7W0 230 aa8.63□□□□□ -1.03
Sf3a1-201ENSMUST00000002198 Tenm3Q9WTS6 2715 aa8.62□□□□□ -1.03
Sf3a1-201ENSMUST00000002198 Col6a3E9PWQ3 3284 aa8.61□□□□□ -1.03
Sf3a1-201ENSMUST00000002198 Tenm4Q3UHK6 2771 aa8.61□□□□□ -1.03
Sf3a1-201ENSMUST00000002198 H2al1mQ9DAD9 105 aa8.6□□□□□ -1.03
Sf3a1-201ENSMUST00000002198 VcanQ62059 3357 aa8.58□□□□□ -1.04
Sf3a1-201ENSMUST00000002198 Stab2Q8R4U0 2559 aa8.55□□□□□ -1.04
Sf3a1-201ENSMUST00000002198 Tnp2P11378 117 aa8.54□□□□□ -1.04
Sf3a1-201ENSMUST00000002198 Igfn1Q3KNY0 2849 aa8.53□□□□□ -1.04
Sf3a1-201ENSMUST00000002198 Cystm1Q8K353 104 aa8.53□□□□□ -1.04
Sf3a1-201ENSMUST00000002198 Rnase13Q5GAM7 153 aa8.51□□□□□ -1.05
Sf3a1-201ENSMUST00000002198 Gm9507D3Z5T3 223 aa8.5□□□□□ -1.05
Sf3a1-201ENSMUST00000002198 RelnQ60841 3461 aa8.5□□□□□ -1.05
Sf3a1-201ENSMUST00000002198 2310034C09RikQ9D746 214 aa8.49□□□□□ -1.05
Sf3a1-201ENSMUST00000002198 Rps29P62274 56 aa8.48□□□□□ -1.05
Sf3a1-201ENSMUST00000002198 Nbeal2Q6ZQA0 2742 aa8.47□□□□□ -1.05
Sf3a1-201ENSMUST00000002198 Dchs2A0A0A6YW72 3346 aa8.46□□□□□ -1.06
Sf3a1-201ENSMUST00000002198 Krtap14O08640 167 aa8.46□□□□□ -1.06
Sf3a1-201ENSMUST00000002198 Gm9821Q8K076 103 aa8.46□□□□□ -1.06
Sf3a1-201ENSMUST00000002198 SpegQ62407 3262 aa8.45□□□□□ -1.06
Sf3a1-201ENSMUST00000002198 Celsr2Q9R0M0 2920 aa8.44□□□□□ -1.06
Sf3a1-201ENSMUST00000002198 Krtap13O88375 197 aa8.43□□□□□ -1.06
Sf3a1-201ENSMUST00000002198 Defb1P56386 69 aa8.41□□□□□ -1.06
Sf3a1-201ENSMUST00000002198 Gm2310J3QNJ2 377 aa8.38□□□□□ -1.07
Sf3a1-201ENSMUST00000002198 Gm4491E0CX42 125 aa8.38□□□□□ -1.07
Sf3a1-201ENSMUST00000002198 Myo15aQ9QZZ4 3511 aa8.37□□□□□ -1.07
Sf3a1-201ENSMUST00000002198 Zfhx4Q9JJN2 3550 aa8.37□□□□□ -1.07
Sf3a1-201ENSMUST00000002198 Pkd1l1Q8R526 2615 aa8.35□□□□□ -1.07
Sf3a1-201ENSMUST00000002198 Nf1Q04690 2841 aa8.35□□□□□ -1.07
Sf3a1-201ENSMUST00000002198 Gm21798J3QNU5 87 aa8.35□□□□□ -1.07
Sf3a1-201ENSMUST00000002198 HrnrQ8VHD8 2496 aa8.35□□□□□ -1.07
Sf3a1-201ENSMUST00000002198 Tex15F8VPN2 2785 aa8.32□□□□□ -1.08
Sf3a1-201ENSMUST00000002198 OtogO55225 2910 aa8.31□□□□□ -1.08
Sf3a1-201ENSMUST00000002198 Srrm2Q8BTI8 2703 aaKnown RBP8.3□□□□□ -1.08
Sf3a1-201ENSMUST00000002198 LrbaQ9ESE1 2856 aa8.3□□□□□ -1.08
Sf3a1-201ENSMUST00000002198 Dchs1E9PVD3 3291 aa8.3□□□□□ -1.08
Sf3a1-201ENSMUST00000002198 Gm5767A0A0J9YTU8 78 aa8.29□□□□□ -1.08
Sf3a1-201ENSMUST00000002198 Gm12216A0A1W2P827 62 aa8.28□□□□□ -1.08
Sf3a1-201ENSMUST00000002198 Chd9Q8BYH8 2885 aa8.28□□□□□ -1.08
Sf3a1-201ENSMUST00000002198 Akap9Q70FJ1 3797 aa8.28□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 66.5 ms