RNA–Protein interactions for RNA: ENSMUST00000002198.3

Sf3a1-201, Transcript of Splicing factor 3A subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3a1, Length 4,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1-201ENSMUST00000002198 Rhox8Q6VSS7 320 aa25.84■■□□□ 1.73
Sf3a1-201ENSMUST00000002198 NischQ80TM9 1593 aa25.68■■□□□ 1.7
Sf3a1-201ENSMUST00000002198 Abcc9P70170 1546 aa24.47■■□□□ 1.51
Sf3a1-201ENSMUST00000002198 Gm35339A0A140LHH9 1649 aa24.14■■□□□ 1.46
Sf3a1-201ENSMUST00000002198 Abcc8B2RUS7 1588 aa23.98■■□□□ 1.43
Sf3a1-201ENSMUST00000002198 Rtl1Q7M732 1744 aa23.5■■□□□ 1.35
Sf3a1-201ENSMUST00000002198 Trim41Q5NCC3 630 aa23.35■■□□□ 1.33
Sf3a1-201ENSMUST00000002198 Ccdc136Q3TVA9 1136 aa23.3■■□□□ 1.32
Sf3a1-201ENSMUST00000002198 Ccdc180J3QNE4 1664 aa23.2■■□□□ 1.3
Sf3a1-201ENSMUST00000002198 Esf1Q3V1V3 845 aaKnown RBP23.03■■□□□ 1.28
Sf3a1-201ENSMUST00000002198 Rpgrip1Q9EPQ2 1331 aa23■■□□□ 1.27
Sf3a1-201ENSMUST00000002198 Cngb1E1AZ71 1325 aa22.89■■□□□ 1.26
Sf3a1-201ENSMUST00000002198 Zcchc6Q5BLK4 1491 aaKnown RBP22.76■■□□□ 1.23
Sf3a1-201ENSMUST00000002198 HrcG5E8J6 738 aa22.65■■□□□ 1.22
Sf3a1-201ENSMUST00000002198 NacadQ5SWP3 1504 aa22.54■■□□□ 1.2
Sf3a1-201ENSMUST00000002198 Dcaf1Q80TR8 1506 aa22.54■■□□□ 1.2
Sf3a1-201ENSMUST00000002198 Rb1cc1Q9ESK9 1588 aa22.53■■□□□ 1.2
Sf3a1-201ENSMUST00000002198 Gab3Q8BSM5 595 aa22.26■■□□□ 1.15
Sf3a1-201ENSMUST00000002198 Npm2Q80W85 207 aa22.25■■□□□ 1.15
Sf3a1-201ENSMUST00000002198 Baz1aO88379 1555 aa22.22■■□□□ 1.15
Sf3a1-201ENSMUST00000002198 Brd4Q9ESU6 1400 aaKnown RBP22.12■■□□□ 1.13
Sf3a1-201ENSMUST00000002198 Kdm5dQ62240 1548 aa22.11■■□□□ 1.13
Sf3a1-201ENSMUST00000002198 Zeb1Q64318 1117 aa22.1■■□□□ 1.13
Sf3a1-201ENSMUST00000002198 Ehmt2Q9Z148 1263 aaKnown RBP22.07■■□□□ 1.12
Sf3a1-201ENSMUST00000002198 Myt1lP97500 1187 aa21.88■■□□□ 1.09
Sf3a1-201ENSMUST00000002198 Crybg2B7ZCC2 1516 aa21.79■■□□□ 1.08
Sf3a1-201ENSMUST00000002198 ScribQ80U72 1612 aa21.75■■□□□ 1.07
Sf3a1-201ENSMUST00000002198 Acin1Q9JIX8 1338 aaKnown RBP21.75■■□□□ 1.07
Sf3a1-201ENSMUST00000002198 Las1lA2BE28 776 aaKnown RBP21.72■■□□□ 1.07
Sf3a1-201ENSMUST00000002198 Sycp2Q9CUU3 1500 aa21.66■■□□□ 1.06
Sf3a1-201ENSMUST00000002198 Il27Q8K3I6 234 aa21.63■■□□□ 1.05
Sf3a1-201ENSMUST00000002198 NefmP08553 848 aa21.59■■□□□ 1.05
Sf3a1-201ENSMUST00000002198 Cep164Q5DU05 1446 aa21.58■■□□□ 1.05
Sf3a1-201ENSMUST00000002198 Npm1Q61937 292 aaKnown RBP21.41■■□□□ 1.02
Sf3a1-201ENSMUST00000002198 Ube2uB1AUC4 352 aa21.4■■□□□ 1.02
Sf3a1-201ENSMUST00000002198 Golga3P55937 1487 aa21.37■■□□□ 1.01
Sf3a1-201ENSMUST00000002198 UbtfP25976 765 aaKnown RBP21.35■■□□□ 1.01
Sf3a1-201ENSMUST00000002198 Pds5bQ4VA53 1446 aaKnown RBP21.29■■□□□ 1
Sf3a1-201ENSMUST00000002198 Wdr66E9Q743 1299 aa21.27■■□□□ 1
Sf3a1-201ENSMUST00000002198 Ercc6F8VPZ5 1481 aa21.27■■□□□ 1
Sf3a1-201ENSMUST00000002198 Smarca2Q6DIC0 1577 aa21.27■■□□□ 1
Sf3a1-201ENSMUST00000002198 Chic1Q8CBW7 227 aa21.15■□□□□ 0.98
Sf3a1-201ENSMUST00000002198 Rsf1E9PWW9 1441 aaKnown RBP21.13■□□□□ 0.97
Sf3a1-201ENSMUST00000002198 Ubl4bQ9CQ84 188 aa21.1■□□□□ 0.97
Sf3a1-201ENSMUST00000002198 CftrP26361 1476 aa20.95■□□□□ 0.94
Sf3a1-201ENSMUST00000002198 Ap3b1Q9Z1T1 1105 aa20.95■□□□□ 0.94
Sf3a1-201ENSMUST00000002198 Atad2bE9Q166 1460 aaKnown RBP20.94■□□□□ 0.94
Sf3a1-201ENSMUST00000002198 Kif15Q6P9L6 1387 aa20.93■□□□□ 0.94
Sf3a1-201ENSMUST00000002198 Smarca4Q3TKT4 1613 aaKnown RBP20.92■□□□□ 0.94
Sf3a1-201ENSMUST00000002198 Ccdc18Q640L5 1455 aa20.92■□□□□ 0.94
Sf3a1-201ENSMUST00000002198 Fmn1Q05860 1466 aa20.88■□□□□ 0.93
Sf3a1-201ENSMUST00000002198 Clip1Q922J3 1391 aa20.86■□□□□ 0.93
Sf3a1-201ENSMUST00000002198 Cecr2E9Q2Z1 1453 aa20.85■□□□□ 0.93
Sf3a1-201ENSMUST00000002198 Cttnbp2B9EJA2 1648 aa20.82■□□□□ 0.92
Sf3a1-201ENSMUST00000002198 Fam50aQ9WV03 339 aaKnown RBP20.79■□□□□ 0.92
Sf3a1-201ENSMUST00000002198 Synj1Q8CHC4 1574 aa20.78■□□□□ 0.92
Sf3a1-201ENSMUST00000002198 Mier1Q5UAK0 511 aa20.76■□□□□ 0.91
Sf3a1-201ENSMUST00000002198 Stra8P70278 393 aa20.7■□□□□ 0.9
Sf3a1-201ENSMUST00000002198 NclP09405 707 aaKnown RBP20.69■□□□□ 0.9
Sf3a1-201ENSMUST00000002198 Plekhg3Q4VAC9 1341 aa20.66■□□□□ 0.9
Sf3a1-201ENSMUST00000002198 TonslQ6NZL6 1363 aa20.64■□□□□ 0.89
Sf3a1-201ENSMUST00000002198 Iqgap2Q3UQ44 1575 aa20.6■□□□□ 0.89
Sf3a1-201ENSMUST00000002198 Ccdc88bQ4QRL3 1481 aa20.6■□□□□ 0.89
Sf3a1-201ENSMUST00000002198 Phldb1Q6PDH0 1371 aaKnown RBP20.59■□□□□ 0.89
Sf3a1-201ENSMUST00000002198 Ccer2J3QPU5 274 aa20.55■□□□□ 0.88
Sf3a1-201ENSMUST00000002198 Lmod2Q3UHZ5 550 aa20.55■□□□□ 0.88
Sf3a1-201ENSMUST00000002198 Setd5Q5XJV7 1441 aa20.54■□□□□ 0.88
Sf3a1-201ENSMUST00000002198 Eea1Q8BL66 1411 aa20.52■□□□□ 0.88
Sf3a1-201ENSMUST00000002198 BicraF8VPZ9 1578 aa20.44■□□□□ 0.86
Sf3a1-201ENSMUST00000002198 Cep162Q6ZQ06 1403 aa20.42■□□□□ 0.86
Sf3a1-201ENSMUST00000002198 Pcgf6Q99NA9 353 aa20.4■□□□□ 0.86
Sf3a1-201ENSMUST00000002198 BlmO88700 1416 aa20.39■□□□□ 0.85
Sf3a1-201ENSMUST00000002198 Cdk11bP24788 784 aaKnown RBP20.38■□□□□ 0.85
Sf3a1-201ENSMUST00000002198 Hdac5Q9Z2V6 1113 aa20.37■□□□□ 0.85
Sf3a1-201ENSMUST00000002198 Cux2P70298 1426 aa20.35■□□□□ 0.85
Sf3a1-201ENSMUST00000002198 Anp32bQ9EST5 272 aaKnown RBP20.29■□□□□ 0.84
Sf3a1-201ENSMUST00000002198 ClspnQ80YR7 1315 aa20.22■□□□□ 0.83
Sf3a1-201ENSMUST00000002198 Rapgef2Q8CHG7 1496 aa20.21■□□□□ 0.83
Sf3a1-201ENSMUST00000002198 Pelp1Q9DBD5 1123 aaKnown RBP20.19■□□□□ 0.82
Sf3a1-201ENSMUST00000002198 Neurod1Q60867 357 aa20.16■□□□□ 0.82
Sf3a1-201ENSMUST00000002198 Nop58Q6DFW4 536 aaKnown RBP20.14■□□□□ 0.82
Sf3a1-201ENSMUST00000002198 LrpprcQ6PB66 1392 aaKnown RBP20.14■□□□□ 0.82
Sf3a1-201ENSMUST00000002198 Supt5hO55201 1082 aaKnown RBP20.13■□□□□ 0.81
Sf3a1-201ENSMUST00000002198 Carmil1Q6EDY6 1374 aa20.13■□□□□ 0.81
Sf3a1-201ENSMUST00000002198 Tnnt3Q9QZ47 272 aa20.12■□□□□ 0.81
Sf3a1-201ENSMUST00000002198 Top2aQ01320 1528 aaKnown RBP20.12■□□□□ 0.81
Sf3a1-201ENSMUST00000002198 Baz1bQ9Z277 1479 aa20.12■□□□□ 0.81
Sf3a1-201ENSMUST00000002198 NrdcQ8BHG1 1161 aa20.11■□□□□ 0.81
Sf3a1-201ENSMUST00000002198 Clstn2Q9ER65 966 aa20.1■□□□□ 0.81
Sf3a1-201ENSMUST00000002198 Top2bQ64511 1612 aa20.07■□□□□ 0.8
Sf3a1-201ENSMUST00000002198 Frmpd1A2AKB4 1549 aa20.07■□□□□ 0.8
Sf3a1-201ENSMUST00000002198 Cc2d2aQ8CFW7 1633 aa20.07■□□□□ 0.8
Sf3a1-201ENSMUST00000002198 Os9Q8K2C7 672 aa20.06■□□□□ 0.8
Sf3a1-201ENSMUST00000002198 Rpap1Q80TE0 1409 aa20.05■□□□□ 0.8
Sf3a1-201ENSMUST00000002198 CntlnA2AM05 1397 aa20.05■□□□□ 0.8
Sf3a1-201ENSMUST00000002198 Mia2Q91ZV0 1396 aa20.05■□□□□ 0.8
Sf3a1-201ENSMUST00000002198 Fkbp15Q6P9Q6 1216 aaKnown RBP20.04■□□□□ 0.8
Sf3a1-201ENSMUST00000002198 Wdr62Q3U3T8 1523 aa20.03■□□□□ 0.8
Sf3a1-201ENSMUST00000002198 Arhgap27A2AB59 869 aa20.02■□□□□ 0.8
Sf3a1-201ENSMUST00000002198 Efcab5A0JP43 1406 aa20■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms