RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Ankhd1E9PUR0 2548 aaKnown RBP6.09□□□□□ -1.43
Ptpre-204ENSMUST00000209979 Gpr15lA0A0B4J1N3 78 aa6.09□□□□□ -1.43
Ptpre-204ENSMUST00000209979 Sprr1bQ62267 153 aa6.09□□□□□ -1.44
Ptpre-204ENSMUST00000209979 Gm21798J3QNU5 87 aa6.08□□□□□ -1.44
Ptpre-204ENSMUST00000209979 A330070K13RikQ8CA53 115 aa6.08□□□□□ -1.44
Ptpre-204ENSMUST00000209979 Tln1P26039 2541 aaKnown RBP6.07□□□□□ -1.44
Ptpre-204ENSMUST00000209979 Ly6g6cQ9Z1Q4 126 aa6.07□□□□□ -1.44
Ptpre-204ENSMUST00000209979 Phf5aP83870 110 aaKnown RBP6.07□□□□□ -1.44
Ptpre-204ENSMUST00000209979 Flg2Q2VIS4 2362 aa6.07□□□□□ -1.44
Ptpre-204ENSMUST00000209979 Srsf12Q8C8K3 266 aa6.06□□□□□ -1.44
Ptpre-204ENSMUST00000209979 Snhg11Q4G0K9 87 aa6.05□□□□□ -1.44
Ptpre-204ENSMUST00000209979 Lypd5Q9D7Z7 256 aa6.05□□□□□ -1.44
Ptpre-204ENSMUST00000209979 Kiaa1549Q68FD9 1940 aa6.04□□□□□ -1.44
Ptpre-204ENSMUST00000209979 Sprr4Q8CGN8 76 aa6.04□□□□□ -1.44
Ptpre-204ENSMUST00000209979 Spaca4Q80ZQ0 127 aa6.04□□□□□ -1.44
Ptpre-204ENSMUST00000209979 Lrp4Q8VI56 1905 aa6.03□□□□□ -1.44
Ptpre-204ENSMUST00000209979 Pkd1l2Q7TN88 2461 aa6.02□□□□□ -1.45
Ptpre-204ENSMUST00000209979 Gm26620Q9CY65 116 aa6.02□□□□□ -1.45
Ptpre-204ENSMUST00000209979 Gm9955Q8CEJ8 102 aa6.01□□□□□ -1.45
Ptpre-204ENSMUST00000209979 Ptpn13Q64512 2453 aa6.01□□□□□ -1.45
Ptpre-204ENSMUST00000209979 Fam229bQ8CF36 80 aa6.01□□□□□ -1.45
Ptpre-204ENSMUST00000209979 Spata3Q9D9T6 193 aa6□□□□□ -1.45
Ptpre-204ENSMUST00000209979 Col27a1Q5QNQ9 1845 aa6□□□□□ -1.45
Ptpre-204ENSMUST00000209979 Cypt14J3QPF7 87 aa5.99□□□□□ -1.45
Ptpre-204ENSMUST00000209979 Col5a1O88207 1838 aa5.98□□□□□ -1.45
Ptpre-204ENSMUST00000209979 Gm3646F6S692 53 aa5.96□□□□□ -1.45
Ptpre-204ENSMUST00000209979 Zfp462B1AWL2 2495 aaKnown RBP5.96□□□□□ -1.46
Ptpre-204ENSMUST00000209979 PolqQ8CGS6 2544 aa5.96□□□□□ -1.46
Ptpre-204ENSMUST00000209979 2310034C09RikQ9D746 214 aa5.96□□□□□ -1.46
Ptpre-204ENSMUST00000209979 Smim29Q8R043 75 aa5.95□□□□□ -1.46
Ptpre-204ENSMUST00000209979 Gm3880A0A1B0GSB3 72 aa5.94□□□□□ -1.46
Ptpre-204ENSMUST00000209979 Fam168bQ80XQ8 194 aa5.94□□□□□ -1.46
Ptpre-204ENSMUST00000209979 Usp9xP70398 2559 aaKnown RBP5.94□□□□□ -1.46
Ptpre-204ENSMUST00000209979 Krtap11-1E9Q2E9 183 aa5.94□□□□□ -1.46
Ptpre-204ENSMUST00000209979 1700042G07RikB1AUF7 90 aa5.93□□□□□ -1.46
Ptpre-204ENSMUST00000209979 Col4a2P08122 1707 aa5.93□□□□□ -1.46
Ptpre-204ENSMUST00000209979 C530025M09RikF6RGA8 229 aa5.92□□□□□ -1.46
Ptpre-204ENSMUST00000209979 AW011738F6S7Q2 159 aa5.91□□□□□ -1.46
Ptpre-204ENSMUST00000209979 Fam104aA2A6P4 185 aa5.91□□□□□ -1.46
Ptpre-204ENSMUST00000209979 Gm9821Q8K076 103 aa5.9□□□□□ -1.46
Ptpre-204ENSMUST00000209979 TrrapQ80YV3 2565 aaKnown RBP5.9□□□□□ -1.46
Ptpre-204ENSMUST00000209979 Defb11Q8R2I7 77 aa5.89□□□□□ -1.47
Ptpre-204ENSMUST00000209979 Piezo2Q8CD54 2822 aa5.86□□□□□ -1.47
Ptpre-204ENSMUST00000209979 Gm3285A0A1W2P7U0 201 aa5.85□□□□□ -1.47
Ptpre-204ENSMUST00000209979 Krtap24-1G3X9A2 248 aa5.85□□□□□ -1.47
Ptpre-204ENSMUST00000209979 Zcchc13Q9D548 170 aa5.85□□□□□ -1.47
Ptpre-204ENSMUST00000209979 4933415A04RikQ9D443 101 aa5.84□□□□□ -1.48
Ptpre-204ENSMUST00000209979 6030445D17RikE9Q8F9 148 aa5.82□□□□□ -1.48
Ptpre-204ENSMUST00000209979 SrcapA0A087WQ44 3271 aa5.81□□□□□ -1.48
Ptpre-204ENSMUST00000209979 Setd2E9Q5F9 2537 aa5.8□□□□□ -1.48
Ptpre-204ENSMUST00000209979 Gm37013Q8K491 104 aa5.8□□□□□ -1.48
Ptpre-204ENSMUST00000209979 Cystm1Q8K353 104 aa5.8□□□□□ -1.48
Ptpre-204ENSMUST00000209979 Defb9Q8R2I6 67 aa5.79□□□□□ -1.48
Ptpre-204ENSMUST00000209979 SetxA2AKX3 2646 aa5.78□□□□□ -1.48
Ptpre-204ENSMUST00000209979 FlnbQ80X90 2602 aaKnown RBP5.77□□□□□ -1.49
Ptpre-204ENSMUST00000209979 Romo1P60603 79 aa5.76□□□□□ -1.49
Ptpre-204ENSMUST00000209979 SmcpP15265 143 aa5.76□□□□□ -1.49
Ptpre-204ENSMUST00000209979 MtorQ9JLN9 2549 aa5.74□□□□□ -1.49
Ptpre-204ENSMUST00000209979 Odf3bQ5M8M2 238 aa5.74□□□□□ -1.49
Ptpre-204ENSMUST00000209979 Dmbt1Q60997 2085 aa5.74□□□□□ -1.49
Ptpre-204ENSMUST00000209979 Cep192E9Q4Y4 2514 aaKnown RBP5.72□□□□□ -1.49
Ptpre-204ENSMUST00000209979 Camk2n1Q6QWF9 78 aa5.72□□□□□ -1.49
Ptpre-204ENSMUST00000209979 Plac8Q9JI48 112 aa5.71□□□□□ -1.5
Ptpre-204ENSMUST00000209979 Epg5Q80TA9 2572 aa5.71□□□□□ -1.5
Ptpre-204ENSMUST00000209979 Rpl37Q9D823 97 aa5.71□□□□□ -1.5
Ptpre-204ENSMUST00000209979 Gm4491E0CX42 125 aa5.7□□□□□ -1.5
Ptpre-204ENSMUST00000209979 Gm10320E9PW43 113 aa5.7□□□□□ -1.5
Ptpre-204ENSMUST00000209979 Bahcc1Q3UHR0 2643 aa5.69□□□□□ -1.5
Ptpre-204ENSMUST00000209979 Unc79Q0KK59 2596 aa5.68□□□□□ -1.5
Ptpre-204ENSMUST00000209979 Anapc11Q9CPX9 84 aa5.68□□□□□ -1.5
Ptpre-204ENSMUST00000209979 Myo18bE9PV66 2605 aa5.67□□□□□ -1.5
Ptpre-204ENSMUST00000209979 Fam229aB2KGE5 128 aa5.66□□□□□ -1.5
Ptpre-204ENSMUST00000209979 Abca12E9Q876 2595 aa5.66□□□□□ -1.5
Ptpre-204ENSMUST00000209979 NbdyA0A0N4SUI7 68 aa5.65□□□□□ -1.5
Ptpre-204ENSMUST00000209979 Gm10139O88245 57 aa5.65□□□□□ -1.51
Ptpre-204ENSMUST00000209979 Gm10065F6TJM2 114 aa5.64□□□□□ -1.51
Ptpre-204ENSMUST00000209979 Gm42715A0A087WP63 3095 aaKnown RBP5.64□□□□□ -1.51
Ptpre-204ENSMUST00000209979 A730071L15RikQ8C4X0 137 aa5.64□□□□□ -1.51
Ptpre-204ENSMUST00000209979 Spink7Q6IE32 76 aa5.63□□□□□ -1.51
Ptpre-204ENSMUST00000209979 Golgb1E9PVZ8 3238 aa5.63□□□□□ -1.51
Ptpre-204ENSMUST00000209979 Gm10382Q3V0T5 144 aa5.62□□□□□ -1.51
Ptpre-204ENSMUST00000209979 Cox6b2Q80ZN9 88 aa5.61□□□□□ -1.51
Ptpre-204ENSMUST00000209979 PcntP48725 2898 aa5.6□□□□□ -1.51
Ptpre-204ENSMUST00000209979 Lama2Q60675 3118 aaKnown RBP5.6□□□□□ -1.51
Ptpre-204ENSMUST00000209979 Gm16253D3Z167 63 aa5.58□□□□□ -1.52
Ptpre-204ENSMUST00000209979 Ankrd11E9Q4F7 2643 aa5.57□□□□□ -1.52
Ptpre-204ENSMUST00000209979 Gm3250E9Q1M3 230 aa5.56□□□□□ -1.52
Ptpre-204ENSMUST00000209979 Usp9yF8VPU6 2556 aa5.56□□□□□ -1.52
Ptpre-204ENSMUST00000209979 OxtP35454 125 aa5.55□□□□□ -1.52
Ptpre-204ENSMUST00000209979 Zfp292Q9Z2U2 2698 aa5.55□□□□□ -1.52
Ptpre-204ENSMUST00000209979 Ankrd17Q99NH0 2603 aaKnown RBP5.54□□□□□ -1.52
Ptpre-204ENSMUST00000209979 Ep400Q8CHI8 3072 aaKnown RBP5.53□□□□□ -1.52
Ptpre-204ENSMUST00000209979 Sec61bQ9CQS8 96 aaKnown RBP5.53□□□□□ -1.52
Ptpre-204ENSMUST00000209979 Nbeal1E9PYP2 2688 aa5.52□□□□□ -1.53
Ptpre-204ENSMUST00000209979 Gm11565A2A4M7 156 aa5.52□□□□□ -1.53
Ptpre-204ENSMUST00000209979 Sprr1aQ62266 144 aa5.51□□□□□ -1.53
Ptpre-204ENSMUST00000209979 Ndufaf8A2AMZ4 74 aa5.5□□□□□ -1.53
Ptpre-204ENSMUST00000209979 CicQ924A2 2510 aa5.5□□□□□ -1.53
Ptpre-204ENSMUST00000209979 FasnP19096 2504 aaKnown RBP5.49□□□□□ -1.53
Ptpre-204ENSMUST00000209979 Gm9112A2AI92 75 aa5.45□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 125 ms