RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Rpgrip1Q9EPQ2 1331 aa15.41■□□□□ 0.06
Ptpre-204ENSMUST00000209979 Rhox8Q6VSS7 320 aa15.2■□□□□ 0.02
Ptpre-204ENSMUST00000209979 Las1lA2BE28 776 aaKnown RBP15.08■□□□□ 0
Ptpre-204ENSMUST00000209979 Cngb1E1AZ71 1325 aa15.06■□□□□ 0
Ptpre-204ENSMUST00000209979 Pelp1Q9DBD5 1123 aaKnown RBP14.74□□□□□ -0.05
Ptpre-204ENSMUST00000209979 Myt1Q8CFC2 1127 aa14.22□□□□□ -0.13
Ptpre-204ENSMUST00000209979 CenpbP27790 599 aa14.21□□□□□ -0.13
Ptpre-204ENSMUST00000209979 Amer1Q7TS75 1132 aa14.09□□□□□ -0.15
Ptpre-204ENSMUST00000209979 Wdr66E9Q743 1299 aa14.06□□□□□ -0.16
Ptpre-204ENSMUST00000209979 Ehmt2Q9Z148 1263 aaKnown RBP13.97□□□□□ -0.17
Ptpre-204ENSMUST00000209979 4930567H17RikQ3V0K5 233 aa13.84□□□□□ -0.19
Ptpre-204ENSMUST00000209979 Zeb1Q64318 1117 aa13.82□□□□□ -0.2
Ptpre-204ENSMUST00000209979 Stra8P70278 393 aa13.74□□□□□ -0.21
Ptpre-204ENSMUST00000209979 Acin1Q9JIX8 1338 aaKnown RBP13.74□□□□□ -0.21
Ptpre-204ENSMUST00000209979 NefmP08553 848 aa13.63□□□□□ -0.23
Ptpre-204ENSMUST00000209979 Rtl5Q5DTT4 599 aa13.51□□□□□ -0.25
Ptpre-204ENSMUST00000209979 Tnnt3Q9QZ47 272 aa13.47□□□□□ -0.25
Ptpre-204ENSMUST00000209979 Ube2uB1AUC4 352 aa13.47□□□□□ -0.25
Ptpre-204ENSMUST00000209979 DiexfQ8BTT6 772 aaKnown RBP13.45□□□□□ -0.26
Ptpre-204ENSMUST00000209979 4933416C03RikQ3V063 378 aa13.43□□□□□ -0.26
Ptpre-204ENSMUST00000209979 Cdk11bP24788 784 aaKnown RBP13.42□□□□□ -0.26
Ptpre-204ENSMUST00000209979 Pcgf6Q99NA9 353 aa13.35□□□□□ -0.27
Ptpre-204ENSMUST00000209979 Ttbk1Q6PCN3 1308 aa13.34□□□□□ -0.27
Ptpre-204ENSMUST00000209979 Esf1Q3V1V3 845 aaKnown RBP13.3□□□□□ -0.28
Ptpre-204ENSMUST00000209979 Ccdc136Q3TVA9 1136 aa13.25□□□□□ -0.29
Ptpre-204ENSMUST00000209979 Trim41Q5NCC3 630 aa13.24□□□□□ -0.29
Ptpre-204ENSMUST00000209979 Gab3Q8BSM5 595 aa13.21□□□□□ -0.3
Ptpre-204ENSMUST00000209979 Nop58Q6DFW4 536 aaKnown RBP13.17□□□□□ -0.3
Ptpre-204ENSMUST00000209979 Npm2Q80W85 207 aa13.13□□□□□ -0.31
Ptpre-204ENSMUST00000209979 NeflP08551 543 aa13.09□□□□□ -0.31
Ptpre-204ENSMUST00000209979 Slc24a1Q91WD8 1130 aa13.09□□□□□ -0.31
Ptpre-204ENSMUST00000209979 HrcG5E8J6 738 aa13.08□□□□□ -0.32
Ptpre-204ENSMUST00000209979 NrdcQ8BHG1 1161 aa13.04□□□□□ -0.32
Ptpre-204ENSMUST00000209979 Anp32bQ9EST5 272 aaKnown RBP13.02□□□□□ -0.33
Ptpre-204ENSMUST00000209979 Myt1lP97500 1187 aa12.99□□□□□ -0.33
Ptpre-204ENSMUST00000209979 UbtfP25976 765 aaKnown RBP12.98□□□□□ -0.33
Ptpre-204ENSMUST00000209979 Anp32aO35381 247 aa12.96□□□□□ -0.33
Ptpre-204ENSMUST00000209979 NischQ80TM9 1593 aa12.96□□□□□ -0.33
Ptpre-204ENSMUST00000209979 Ccdc180J3QNE4 1664 aa12.95□□□□□ -0.34
Ptpre-204ENSMUST00000209979 Ythdc1E9Q5K9 736 aaKnown RBP12.9□□□□□ -0.34
Ptpre-204ENSMUST00000209979 Supt5hO55201 1082 aaKnown RBP12.89□□□□□ -0.35
Ptpre-204ENSMUST00000209979 Ccdc9Q8VC31 543 aaKnown RBP12.84□□□□□ -0.35
Ptpre-204ENSMUST00000209979 DaxxO35613 739 aa12.82□□□□□ -0.36
Ptpre-204ENSMUST00000209979 Neurod1Q60867 357 aa12.82□□□□□ -0.36
Ptpre-204ENSMUST00000209979 Eif5bQ05D44 1216 aaKnown RBP12.79□□□□□ -0.36
Ptpre-204ENSMUST00000209979 Aplp2Q06335 707 aa12.78□□□□□ -0.36
Ptpre-204ENSMUST00000209979 NclP09405 707 aaKnown RBP12.74□□□□□ -0.37
Ptpre-204ENSMUST00000209979 TonslQ6NZL6 1363 aa12.72□□□□□ -0.37
Ptpre-204ENSMUST00000209979 Rtl1Q7M732 1744 aa12.71□□□□□ -0.37
Ptpre-204ENSMUST00000209979 Anks4bQ8K3X6 423 aa12.71□□□□□ -0.38
Ptpre-204ENSMUST00000209979 ClspnQ80YR7 1315 aa12.68□□□□□ -0.38
Ptpre-204ENSMUST00000209979 Hsp90aa1P07901 733 aaKnown RBP12.5□□□□□ -0.41
Ptpre-204ENSMUST00000209979 CatipB9EKE5 520 aa12.49□□□□□ -0.41
Ptpre-204ENSMUST00000209979 Csrnp3P59055 597 aa12.49□□□□□ -0.41
Ptpre-204ENSMUST00000209979 Fam50aQ9WV03 339 aaKnown RBP12.49□□□□□ -0.41
Ptpre-204ENSMUST00000209979 Ppargc1bQ8VHJ7 1014 aa12.47□□□□□ -0.41
Ptpre-204ENSMUST00000209979 Mier1Q5UAK0 511 aa12.45□□□□□ -0.42
Ptpre-204ENSMUST00000209979 Upf2A2AT37 1269 aaKnown RBP12.45□□□□□ -0.42
Ptpre-204ENSMUST00000209979 Calr4Q3TQS0 420 aa12.37□□□□□ -0.43
Ptpre-204ENSMUST00000209979 Os9Q8K2C7 672 aa12.36□□□□□ -0.43
Ptpre-204ENSMUST00000209979 Il27Q8K3I6 234 aa12.34□□□□□ -0.43
Ptpre-204ENSMUST00000209979 Bcl11aQ9QYE3 773 aa12.33□□□□□ -0.44
Ptpre-204ENSMUST00000209979 Trim44Q9QXA7 346 aa12.31□□□□□ -0.44
Ptpre-204ENSMUST00000209979 Wdr43Q6ZQL4 677 aaKnown RBP12.31□□□□□ -0.44
Ptpre-204ENSMUST00000209979 Gm38655A0A286YDK6 273 aa12.3□□□□□ -0.44
Ptpre-204ENSMUST00000209979 Ppp4r2Q0VGB7 417 aa12.3□□□□□ -0.44
Ptpre-204ENSMUST00000209979 Sall2Q9QX96 1004 aa12.29□□□□□ -0.44
Ptpre-204ENSMUST00000209979 Ccdc27Q3V036 639 aa12.27□□□□□ -0.45
Ptpre-204ENSMUST00000209979 Lmod3E9QA62 571 aa12.27□□□□□ -0.45
Ptpre-204ENSMUST00000209979 1700123L14RikQ3V2K7 440 aa12.23□□□□□ -0.45
Ptpre-204ENSMUST00000209979 Zcchc6Q5BLK4 1491 aaKnown RBP12.22□□□□□ -0.45
Ptpre-204ENSMUST00000209979 Irx3P81067 507 aa12.21□□□□□ -0.45
Ptpre-204ENSMUST00000209979 Dcaf1Q80TR8 1506 aa12.19□□□□□ -0.46
Ptpre-204ENSMUST00000209979 Ap3b1Q9Z1T1 1105 aa12.18□□□□□ -0.46
Ptpre-204ENSMUST00000209979 Htatsf1Q8BGC0 757 aa12.16□□□□□ -0.46
Ptpre-204ENSMUST00000209979 Nlrp6Q91WS2 869 aa12.16□□□□□ -0.46
Ptpre-204ENSMUST00000209979 Fam71e1A1L3C1 212 aa12.14□□□□□ -0.47
Ptpre-204ENSMUST00000209979 ArxO35085 564 aa12.14□□□□□ -0.47
Ptpre-204ENSMUST00000209979 Tnnt2P50752 301 aa12.13□□□□□ -0.47
Ptpre-204ENSMUST00000209979 Ccer2J3QPU5 274 aa12.12□□□□□ -0.47
Ptpre-204ENSMUST00000209979 Hdac5Q9Z2V6 1113 aa12.12□□□□□ -0.47
Ptpre-204ENSMUST00000209979 Adam1bQ8R534 806 aa12.11□□□□□ -0.47
Ptpre-204ENSMUST00000209979 CanxP35564 591 aaKnown RBP12.11□□□□□ -0.47
Ptpre-204ENSMUST00000209979 DekQ7TNV0 380 aaKnown RBP12.1□□□□□ -0.47
Ptpre-204ENSMUST00000209979 AU015836B2RUM3 263 aa12.09□□□□□ -0.47
Ptpre-204ENSMUST00000209979 Polr3glQ8R0C0 218 aa12.05□□□□□ -0.48
Ptpre-204ENSMUST00000209979 Ppm1gQ61074 542 aa12.03□□□□□ -0.48
Ptpre-204ENSMUST00000209979 Mapk8ip2Q9ERE9 830 aa12.02□□□□□ -0.48
Ptpre-204ENSMUST00000209979 PtmaP26350 111 aa12.02□□□□□ -0.48
Ptpre-204ENSMUST00000209979 Hsp90ab1P11499 724 aaKnown RBP12.02□□□□□ -0.49
Ptpre-204ENSMUST00000209979 Abcc9P70170 1546 aa12.02□□□□□ -0.49
Ptpre-204ENSMUST00000209979 Mrs2Q5NCE8 434 aa11.96□□□□□ -0.5
Ptpre-204ENSMUST00000209979 Npm1Q61937 292 aaKnown RBP11.95□□□□□ -0.5
Ptpre-204ENSMUST00000209979 Plekhg3Q4VAC9 1341 aa11.93□□□□□ -0.5
Ptpre-204ENSMUST00000209979 Trim30dE9PWL0 497 aa11.92□□□□□ -0.5
Ptpre-204ENSMUST00000209979 Plcb2A3KGF7 1181 aa11.91□□□□□ -0.5
Ptpre-204ENSMUST00000209979 Vsig10D3YX43 558 aa11.91□□□□□ -0.5
Ptpre-204ENSMUST00000209979 Calcoco2A2A6M5 331 aa11.89□□□□□ -0.51
Ptpre-204ENSMUST00000209979 MsnP26041 577 aaKnown RBP11.87□□□□□ -0.51
Ptpre-204ENSMUST00000209979 Eid3Q3V124 375 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms