RNA–Protein interactions for RNA: ENSMUST00000207054.1

Smarca2-220, Transcript of Probable global transcription activator SNF2L2, mousemouse

TSL 5 BASIC

Gene Smarca2, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2-220ENSMUST00000207054 Trav9n-2A0A0G2JDP3 113 aa3.27□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Gm10553J3QPF1 123 aa3.27□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Tcl1b3P56842 122 aa3.27□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Zfand2aQ9JII7 171 aa3.27□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Flg2Q2VIS4 2362 aa3.27□□□□□ -1.89
Smarca2-220ENSMUST00000207054 NbasE9Q411 2356 aa3.26□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Bod1lE9Q6J5 3032 aa3.26□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Celsr1O35161 3034 aa3.26□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Dmxl2Q8BPN8 3032 aa3.26□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Gm36368A0A1D5RLK8 91 aa3.26□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Cacna1aP97445 2368 aa3.26□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Igkv4-91A0A075B5L2 119 aa3.26□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Gm21886J3QJU9 214 aa3.26□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Cox17P56394 63 aa3.26□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Ccl21aP84444 133 aa3.25□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Prok1Q14A28 105 aa3.25□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Wfdc3Q14AE4 130 aa3.25□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Cnep1r1Q3UJ81 125 aa3.25□□□□□ -1.89
Smarca2-220ENSMUST00000207054 A330070K13RikQ8CA53 115 aa3.25□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Plac8Q9JI48 112 aa3.25□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Epg5Q80TA9 2572 aa3.25□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Muc5acE9QAQ8 3455 aa3.25□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Zfhx4Q9JJN2 3550 aa3.25□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Elof1P60003 83 aa3.25□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Fxyd3Q61835 88 aa3.25□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Lypd5Q9D7Z7 256 aa3.25□□□□□ -1.89
Smarca2-220ENSMUST00000207054 CenpeQ6RT24 2474 aaKnown RBP3.25□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Zzef1Q5SSH7 2924 aa3.24□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Akap6E9Q9K8 2307 aa3.24□□□□□ -1.89
Smarca2-220ENSMUST00000207054 DspE9Q557 2883 aaKnown RBP3.24□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Gm8439G3UWA7 96 aa3.24□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Ndufb1P0DN34 57 aa3.24□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Gm9513B3GLJ6 99 aa3.24□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Gm10509O88255 85 aa3.24□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Setd2E9Q5F9 2537 aa3.23□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Helz2E9QAM5 2947 aaKnown RBP3.23□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Igkv4-58A0A0G2JGI6 119 aa3.23□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Fam229aB2KGE5 128 aa3.23□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Gm20661K7N787 53 aa3.23□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Ccl21bP86792 133 aa3.23□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Ccl21cP86793 133 aa3.23□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Igkv4-62A0A0G2JDW9 117 aa3.22□□□□□ -1.89
Smarca2-220ENSMUST00000207054 TprF6ZDS4 2431 aaKnown RBP3.22□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Map1bP14873 2464 aaKnown RBP3.22□□□□□ -1.89
Smarca2-220ENSMUST00000207054 NbeaQ9EPN1 2936 aa3.22□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Minos1Q7TNS2 76 aa3.22□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Krtap26-1Q9D7N2 215 aa3.22□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Mast4Q811L6 2618 aa3.22□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Ep300B2RWS6 2412 aa3.21□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Col6a6Q8C6K9 2265 aa3.21□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Igkv8-28A0A0G2JE47 121 aa3.21□□□□□ -1.89
Smarca2-220ENSMUST00000207054 A0A286YE49 62 aa3.21□□□□□ -1.89
Smarca2-220ENSMUST00000207054 Limd2Q8BGB5 128 aa3.21□□□□□ -1.89
Smarca2-220ENSMUST00000207054 C2cd3Q52KB6 2323 aa3.21□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Cmya5Q70KF4 3739 aa3.21□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Igkv4-78A0A0A6YYE5 119 aa3.21□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Igkv1-88A0A140T8N1 120 aa3.21□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Prp2P05143 317 aa3.21□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Ptprz1B9EKR1 2312 aa3.2□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Igkv4-69A0A0B4J1I6 116 aa3.2□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Tff3Q62395 81 aa3.2□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Spag11Q8K4N2 71 aa3.2□□□□□ -1.9
Smarca2-220ENSMUST00000207054 TnxbO35452 4006 aa3.2□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Trank1Q8BV79 2999 aa3.2□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Igkv1-122A0A140T8M9 119 aa3.2□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Spta1P08032 2415 aa3.19□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Prpf8Q99PV0 2335 aaKnown RBP3.19□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Igkv4-79A0A075B5L8 119 aa3.19□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Igkv3-2A0A075B5P0 119 aa3.19□□□□□ -1.9
Smarca2-220ENSMUST00000207054 LhbO09108 141 aa3.19□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Gm9805F6YK59 57 aa3.19□□□□□ -1.9
Smarca2-220ENSMUST00000207054 9130230L23RikQ8CC80 163 aa3.19□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Prrc2cQ3TLH4 2846 aaKnown RBP3.19□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Ptpn13Q64512 2453 aa3.18□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Igkv4-57-1A0A075B5M4 119 aa3.18□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Sprr3O09116 238 aa3.18□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Defb50Q6TU36 73 aa3.18□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Gm37013Q8K491 104 aa3.18□□□□□ -1.9
Smarca2-220ENSMUST00000207054 AcacaQ5SWU9 2345 aa3.18□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Tfpi2O35536 230 aa3.18□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Wfdc15bQ9JHY4 80 aa3.18□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Ubr5Q80TP3 2792 aa3.17□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Myo9aQ8C170 2542 aa3.17□□□□□ -1.9
Smarca2-220ENSMUST00000207054 C130032M10RikQ8C888 123 aa3.17□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Ighv2-7A0A075B5Q8 116 aa3.16□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Pcnx1Q9QYC1 2344 aa3.16□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Tln1P26039 2541 aaKnown RBP3.16□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Lrrk2Q5S006 2527 aa3.16□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Igkv4-57A0A0A6YYE7 117 aa3.16□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Vpreb3D3Z6J4 130 aa3.16□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Odf3bQ5M8M2 238 aa3.16□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Fbn2Q61555 2907 aa3.16□□□□□ -1.9
Smarca2-220ENSMUST00000207054 SonQ9QX47 2444 aaKnown RBP3.15□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Ndufaf8A2AMZ4 74 aa3.15□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Krtap24-1G3X9A2 248 aa3.15□□□□□ -1.9
Smarca2-220ENSMUST00000207054 2310057N15RikQ9D6T8 200 aa3.15□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Msrb1Q9JLC3 116 aa3.15□□□□□ -1.9
Smarca2-220ENSMUST00000207054 Sptbn2Q68FG2 2388 aa3.15□□□□□ -1.91
Smarca2-220ENSMUST00000207054 Sprr2jO70561 109 aa3.15□□□□□ -1.91
Smarca2-220ENSMUST00000207054 Gm10226O88253 85 aa3.15□□□□□ -1.91
Retrieved 100 of 22,080 RNA–protein pairs in 51.3 ms