RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 Defb42Q8BVB5 75 aa4.25□□□□□ -1.73
Ubr4-212ENSMUST00000165860 AplnQ9R0R4 77 aa4.25□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Ankrd17Q99NH0 2603 aaKnown RBP4.24□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Pcsk5Q04592 1877 aa4.24□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Defb39Q70KL3 74 aa4.24□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Gm10320E9PW43 113 aa4.24□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Gm27235Q3UW50 83 aa4.24□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Gm5617Q91VN2 117 aa4.24□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Msrb1Q9JLC3 116 aa4.23□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Cox6a2P43023 97 aa4.23□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Znf575Q3TXZ1 239 aa4.23□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Gm20661K7N787 53 aa4.23□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Q8BT88 171 aa4.23□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Gm43218A0A0G2JGT0 114 aa4.23□□□□□ -1.73
Ubr4-212ENSMUST00000165860 A930009A15RikG3UYI6 118 aa4.22□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Gm16181B0V2H2 73 aa4.22□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Gm3646F6S692 53 aa4.22□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Wdr90Q6ZPG2 1874 aa4.22□□□□□ -1.73
Ubr4-212ENSMUST00000165860 Fam229bQ8CF36 80 aa4.21□□□□□ -1.74
Ubr4-212ENSMUST00000165860 1810062G17RikG3X8Y2 129 aa4.21□□□□□ -1.74
Ubr4-212ENSMUST00000165860 AtrQ9JKK8 2635 aa4.21□□□□□ -1.74
Ubr4-212ENSMUST00000165860 Golgb1E9PVZ8 3238 aa4.2□□□□□ -1.74
Ubr4-212ENSMUST00000165860 Gm28230A0A0A0MQ91 144 aa4.2□□□□□ -1.74
Ubr4-212ENSMUST00000165860 Gm21886J3QJU9 214 aa4.2□□□□□ -1.74
Ubr4-212ENSMUST00000165860 Stab1Q8R4Y4 2571 aa4.2□□□□□ -1.74
Ubr4-212ENSMUST00000165860 Lrp4Q8VI56 1905 aa4.19□□□□□ -1.74
Ubr4-212ENSMUST00000165860 Gm17509Q9CZ61 145 aa4.19□□□□□ -1.74
Ubr4-212ENSMUST00000165860 MobpQ9D2P8 170 aa4.18□□□□□ -1.74
Ubr4-212ENSMUST00000165860 Prr9Q8BV84 116 aa4.18□□□□□ -1.74
Ubr4-212ENSMUST00000165860 Itpr1P11881 2749 aa4.18□□□□□ -1.74
Ubr4-212ENSMUST00000165860 Gcn1E9PVA8 2671 aaKnown RBP4.18□□□□□ -1.74
Ubr4-212ENSMUST00000165860 Gm9573F7C950 1606 aa4.17□□□□□ -1.74
Ubr4-212ENSMUST00000165860 Hectd1Q69ZR2 2618 aaKnown RBP4.17□□□□□ -1.74
Ubr4-212ENSMUST00000165860 Gm3443F7CCV5 94 aa4.17□□□□□ -1.74
Ubr4-212ENSMUST00000165860 Gm21887J3QQ04 176 aa4.15□□□□□ -1.74
Ubr4-212ENSMUST00000165860 1700018G05RikA0A1B0GSI2 66 aa4.15□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Gm10999F6Q4M4 69 aa4.14□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Defb50Q6TU36 73 aa4.14□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Cystm1Q8K353 104 aa4.14□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Snhg11Q4G0K9 87 aa4.14□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Rnase13Q5GAM7 153 aa4.13□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Defb1P56386 69 aa4.13□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Gm9767G3X930 207 aa4.13□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Gm16485Q8C4B7 115 aa4.13□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Krtap11-1E9Q2E9 183 aa4.12□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Gm7276Q3TYW4 209 aa4.12□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Zfp292Q9Z2U2 2698 aa4.12□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Defb10Q8R2I8 73 aa4.12□□□□□ -1.75
Ubr4-212ENSMUST00000165860 D730001G18RikA0A087WQU7 115 aa4.11□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Phxr5P08399 672 aa4.11□□□□□ -1.75
Ubr4-212ENSMUST00000165860 9530053A07RikE9PVG8 2581 aa4.11□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Rpl37aP61514 92 aa4.11□□□□□ -1.75
Ubr4-212ENSMUST00000165860 A330070K13RikQ8CA53 115 aa4.11□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Krtap26-1Q9D7N2 215 aa4.11□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Gm42715A0A087WP63 3095 aaKnown RBP4.11□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Bri3P28662 125 aa4.1□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Gm10642Q3TWM1 71 aa4.1□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Chtf8P0CG14 533 aa4.1□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Prrc2cQ3TLH4 2846 aaKnown RBP4.1□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Sprr1bQ62267 153 aa4.09□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Camk2n1Q6QWF9 78 aa4.09□□□□□ -1.75
Ubr4-212ENSMUST00000165860 2310034C09RikQ9D746 214 aa4.09□□□□□ -1.75
Ubr4-212ENSMUST00000165860 Dmac1Q9CQ00 111 aa4.09□□□□□ -1.76
Ubr4-212ENSMUST00000165860 Gm10772F7AIG4 85 aa4.08□□□□□ -1.76
Ubr4-212ENSMUST00000165860 Gm11627A6PWP4 55 aa4.08□□□□□ -1.76
Ubr4-212ENSMUST00000165860 4930507D05RikQ8C9C9 103 aa4.08□□□□□ -1.76
Ubr4-212ENSMUST00000165860 Lce6aD3YV94 81 aa4.08□□□□□ -1.76
Ubr4-212ENSMUST00000165860 E130208F15RikQ3UPV3 143 aa4.07□□□□□ -1.76
Ubr4-212ENSMUST00000165860 Pkd1l1Q8R526 2615 aa4.07□□□□□ -1.76
Ubr4-212ENSMUST00000165860 CriptO70333 101 aa4.07□□□□□ -1.76
Ubr4-212ENSMUST00000165860 Defb2P82020 71 aa4.06□□□□□ -1.76
Ubr4-212ENSMUST00000165860 Nsd1O88491 2588 aaKnown RBP4.06□□□□□ -1.76
Ubr4-212ENSMUST00000165860 Col6a5A6H584 2640 aa4.06□□□□□ -1.76
Ubr4-212ENSMUST00000165860 CenpfE9Q3P4 2997 aaKnown RBP4.05□□□□□ -1.76
Ubr4-212ENSMUST00000165860 Utp20Q5XG71 2788 aaKnown RBP4.05□□□□□ -1.76
Ubr4-212ENSMUST00000165860 A730071L15RikQ8C4X0 137 aa4.05□□□□□ -1.76
Ubr4-212ENSMUST00000165860 AY074887Q8R5F9 132 aa4.05□□□□□ -1.76
Ubr4-212ENSMUST00000165860 Tep1P97499 2629 aa4.05□□□□□ -1.76
Ubr4-212ENSMUST00000165860 NipblQ6KCD5 2798 aaKnown RBP4.05□□□□□ -1.76
Ubr4-212ENSMUST00000165860 Spata3Q9D9T6 193 aa4.04□□□□□ -1.76
Ubr4-212ENSMUST00000165860 Pla2g2cP48076 150 aa4.03□□□□□ -1.76
Ubr4-212ENSMUST00000165860 Gm37013Q8K491 104 aa4.03□□□□□ -1.76
Ubr4-212ENSMUST00000165860 Gpr15lA0A0B4J1N3 78 aa4.03□□□□□ -1.76
Ubr4-212ENSMUST00000165860 Spaca4Q80ZQ0 127 aa4.03□□□□□ -1.76
Ubr4-212ENSMUST00000165860 Srsf12Q8C8K3 266 aa4.02□□□□□ -1.77
Ubr4-212ENSMUST00000165860 Igsf10Q3V1M1 2594 aa4.01□□□□□ -1.77
Ubr4-212ENSMUST00000165860 Itpr3P70227 2670 aa4.01□□□□□ -1.77
Ubr4-212ENSMUST00000165860 Tnrc18Q80WC3 2878 aa4.01□□□□□ -1.77
Ubr4-212ENSMUST00000165860 Stab2Q8R4U0 2559 aa4□□□□□ -1.77
Ubr4-212ENSMUST00000165860 Col5a1O88207 1838 aa4□□□□□ -1.77
Ubr4-212ENSMUST00000165860 Gm21798J3QNU5 87 aa3.99□□□□□ -1.77
Ubr4-212ENSMUST00000165860 Romo1P60603 79 aa3.99□□□□□ -1.77
Ubr4-212ENSMUST00000165860 Defb11Q8R2I7 77 aa3.99□□□□□ -1.77
Ubr4-212ENSMUST00000165860 FlnaQ8BTM8 2647 aaKnown RBP3.99□□□□□ -1.77
Ubr4-212ENSMUST00000165860 Ep400Q8CHI8 3072 aaKnown RBP3.98□□□□□ -1.77
Ubr4-212ENSMUST00000165860 Fam168bQ80XQ8 194 aa3.97□□□□□ -1.77
Ubr4-212ENSMUST00000165860 Col27a1Q5QNQ9 1845 aa3.97□□□□□ -1.77
Ubr4-212ENSMUST00000165860 Sprr4Q8CGN8 76 aa3.95□□□□□ -1.78
Ubr4-212ENSMUST00000165860 Col4a2P08122 1707 aa3.94□□□□□ -1.78
Ubr4-212ENSMUST00000165860 Odf3bQ5M8M2 238 aa3.94□□□□□ -1.78
Retrieved 100 of 22,080 RNA–protein pairs in 6.9 ms