RNA–Protein interactions for RNA: ENSMUST00000165375.2

Hoxc4-202, Transcript of Homeobox protein Hox-C4, mousemouse

TSL 1 (best) BASIC

Gene Hoxc4, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-202ENSMUST00000165375 B230359F08RikA0A0B4J1K3 109 aa11.44□□□□□ -0.58
Hoxc4-202ENSMUST00000165375 Gm9903Q8C9Y8 129 aa11.44□□□□□ -0.58
Hoxc4-202ENSMUST00000165375 Igkv8-34A0A0G2JDU0 121 aa11.43□□□□□ -0.58
Hoxc4-202ENSMUST00000165375 CnbpP53996 178 aaKnown RBP11.43□□□□□ -0.58
Hoxc4-202ENSMUST00000165375 Dnah3Q8BW94 4083 aa11.42□□□□□ -0.58
Hoxc4-202ENSMUST00000165375 Gm5153P01627 120 aa11.41□□□□□ -0.58
Hoxc4-202ENSMUST00000165375 P01819 144 aa11.41□□□□□ -0.58
Hoxc4-202ENSMUST00000165375 AW011738F6S7Q2 159 aa11.4□□□□□ -0.58
Hoxc4-202ENSMUST00000165375 Igkv8-18A0A0B4J1J3 123 aa11.39□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 Trav13d-4A0A0G2JFX3 110 aa11.39□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 Odf3l2Q3TZ65 277 aa11.39□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 Prp2P05143 317 aa11.39□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 Igkv8-26A0A075B5N5 123 aa11.38□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 Trav13-1A0A075B644 110 aa11.38□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 4930535I16RikQ9CUI2 172 aa11.38□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 Pet100P0DJE0 76 aa11.38□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 Dph3Q8K0W9 82 aa11.38□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 AplnQ9R0R4 77 aa11.38□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 Igkv8-27A0A0G2JF28 120 aa11.37□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 Igkv8-30A0A140T8M3 121 aa11.37□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 BikO70337 150 aa11.36□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 Igkv2-109A0A075B5K6 120 aa11.36□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 Sprr1bQ62267 153 aa11.36□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 Pou2af1Q64693 256 aa11.36□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 SnurfQ9WU12 71 aa11.36□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 Fam229bQ8CF36 80 aa11.35□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 Igkv3-9A0A140T8P4 119 aa11.35□□□□□ -0.59
Hoxc4-202ENSMUST00000165375 Defa20Q45VN2 95 aa11.33□□□□□ -0.6
Hoxc4-202ENSMUST00000165375 Snhg11Q4G0K9 87 aa11.33□□□□□ -0.6
Hoxc4-202ENSMUST00000165375 MplkipQ9D011 178 aa11.33□□□□□ -0.6
Hoxc4-202ENSMUST00000165375 Pde6gP09174 87 aa11.32□□□□□ -0.6
Hoxc4-202ENSMUST00000165375 Trav9n-4A0A075B631 113 aa11.32□□□□□ -0.6
Hoxc4-202ENSMUST00000165375 Igkv1-110A0A0B4J1I0 119 aa11.32□□□□□ -0.6
Hoxc4-202ENSMUST00000165375 UqcrqQ9CQ69 82 aa11.3□□□□□ -0.6
Hoxc4-202ENSMUST00000165375 Ighv10-1A0A0B4J1J6 119 aa11.3□□□□□ -0.6
Hoxc4-202ENSMUST00000165375 Ighv2-2A0A075B5P8 116 aa11.29□□□□□ -0.6
Hoxc4-202ENSMUST00000165375 P01821 116 aa11.29□□□□□ -0.6
Hoxc4-202ENSMUST00000165375 Dnah17Q69Z23 4481 aa11.28□□□□□ -0.6
Hoxc4-202ENSMUST00000165375 Gm37389A0A0A6YW05 95 aa11.28□□□□□ -0.6
Hoxc4-202ENSMUST00000165375 Cox7bP56393 80 aa11.27□□□□□ -0.6
Hoxc4-202ENSMUST00000165375 Klk12B2RVZ0 247 aa11.27□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 Reg3bP35230 175 aa11.27□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 Igkv3-1A0A075B5P1 119 aa11.26□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 Defa27F2Z403 93 aa11.26□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 Vpreb2P13373 142 aa11.26□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 Tcl1b5P56845 121 aa11.26□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 2010109I03RikQ9CQ11 111 aa11.26□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 4930556J24RikQ9D4U7 146 aa11.26□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 A530084C06RikQ3UTW2 186 aa11.25□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 Fam19a3Q7TPG6 132 aa11.25□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 Gm9508A0A1W2P7W0 230 aa11.24□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 Rbm3O89086 153 aaKnown RBP11.24□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 A830005F24RikQ8BRT5 167 aa11.24□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 Megf8P60882 2789 aa11.24□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 Gm10320E9PW43 113 aa11.23□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 Prh1P05142 261 aa11.22□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 9530003J23RikQ8BM26 151 aa11.21□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 Huwe1Q7TMY8 4377 aaKnown RBP11.21□□□□□ -0.61
Hoxc4-202ENSMUST00000165375 C530025M09RikF6RGA8 229 aa11.21□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 Trav13-2A0A075B649 110 aa11.2□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 Gm9805F6YK59 57 aa11.2□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 Gm17689B3GLJ4 109 aa11.19□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 Gm17509Q9CZ61 145 aa11.19□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 Gm10401E9Q3K6 71 aa11.18□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 Bean1Q9EQG5 255 aa11.18□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 Igkv4-58A0A0G2JGI6 119 aa11.18□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 Pkd1l1Q8R526 2615 aa11.17□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 Gm11213A0A1B0GR83 88 aa11.17□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 P06320 134 aa11.17□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 Gm10770F7D043 238 aa11.17□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 Krtap11-1E9Q2E9 183 aa11.16□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 Muc6Q80T03 2850 aa11.16□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 Gm10518F6UQQ9 182 aa11.15□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 A730071L15RikQ8C4X0 137 aa11.15□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 Dnah1E9Q8T7 4250 aa11.15□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 Csmd3Q80T79 3707 aa11.15□□□□□ -0.62
Hoxc4-202ENSMUST00000165375 Defa28D3Z1V9 94 aa11.14□□□□□ -0.63
Hoxc4-202ENSMUST00000165375 Gm10570F6VB42 170 aa11.13□□□□□ -0.63
Hoxc4-202ENSMUST00000165375 Spink8Q09TK9 105 aa11.12□□□□□ -0.63
Hoxc4-202ENSMUST00000165375 2310034G01RikA0A286YDL3 209 aa11.12□□□□□ -0.63
Hoxc4-202ENSMUST00000165375 Msrb1Q9JLC3 116 aa11.12□□□□□ -0.63
Hoxc4-202ENSMUST00000165375 Reg3dQ9QUS9 175 aa11.12□□□□□ -0.63
Hoxc4-202ENSMUST00000165375 Dync2h1Q45VK7 4306 aa11.11□□□□□ -0.63
Hoxc4-202ENSMUST00000165375 Igkv8-16A0A0G2JDG9 121 aa11.1□□□□□ -0.63
Hoxc4-202ENSMUST00000165375 2310061N02RikQ9D6S9 174 aa11.1□□□□□ -0.63
Hoxc4-202ENSMUST00000165375 Q8BT88 171 aa11.08□□□□□ -0.64
Hoxc4-202ENSMUST00000165375 Gm16485Q8C4B7 115 aa11.08□□□□□ -0.64
Hoxc4-202ENSMUST00000165375 A930002H24RikQ8C8Y3 163 aa11.08□□□□□ -0.64
Hoxc4-202ENSMUST00000165375 Dnah7bL7N1Y0 4068 aa11.07□□□□□ -0.64
Hoxc4-202ENSMUST00000165375 Stab2Q8R4U0 2559 aa11.07□□□□□ -0.64
Hoxc4-202ENSMUST00000165375 Gm5617Q91VN2 117 aa11.06□□□□□ -0.64
Hoxc4-202ENSMUST00000165375 Tenm2Q9WTS5 2764 aa11.05□□□□□ -0.64
Hoxc4-202ENSMUST00000165375 Igkv8-28A0A0G2JE47 121 aa11.05□□□□□ -0.64
Hoxc4-202ENSMUST00000165375 E130218I03RikA0A0U1RNU5 63 aa11.05□□□□□ -0.64
Hoxc4-202ENSMUST00000165375 Igkv8-24A0A140T8P5 121 aa11.05□□□□□ -0.64
Hoxc4-202ENSMUST00000165375 AY074887Q8R5F9 132 aa11.05□□□□□ -0.64
Hoxc4-202ENSMUST00000165375 Spint4Q9D263 159 aa11.03□□□□□ -0.64
Hoxc4-202ENSMUST00000165375 Wfdc12Q9JHY3 85 aa11.03□□□□□ -0.64
Hoxc4-202ENSMUST00000165375 PrkdcP97313 4128 aa11.03□□□□□ -0.64
Hoxc4-202ENSMUST00000165375 FasnP19096 2504 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 88.7 ms