RNA–Protein interactions for RNA: ENSMUST00000165375.2

Hoxc4-202, Transcript of Homeobox protein Hox-C4, mousemouse

TSL 1 (best) BASIC

Gene Hoxc4, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-202ENSMUST00000165375 NischQ80TM9 1593 aa34.91■■■■□ 3.18
Hoxc4-202ENSMUST00000165375 Gm35339A0A140LHH9 1649 aa34.88■■■■□ 3.17
Hoxc4-202ENSMUST00000165375 Abcc9P70170 1546 aa33.84■■■■□ 3.01
Hoxc4-202ENSMUST00000165375 Abcc8B2RUS7 1588 aa33.48■■■□□ 2.95
Hoxc4-202ENSMUST00000165375 ScribQ80U72 1612 aa31.69■■■□□ 2.66
Hoxc4-202ENSMUST00000165375 Rhox8Q6VSS7 320 aa31.18■■■□□ 2.58
Hoxc4-202ENSMUST00000165375 Dcaf1Q80TR8 1506 aa31.1■■■□□ 2.57
Hoxc4-202ENSMUST00000165375 Kdm5dQ62240 1548 aa30.9■■■□□ 2.54
Hoxc4-202ENSMUST00000165375 NacadQ5SWP3 1504 aa30.89■■■□□ 2.53
Hoxc4-202ENSMUST00000165375 Rb1cc1Q9ESK9 1588 aa30.48■■■□□ 2.47
Hoxc4-202ENSMUST00000165375 Sycp2Q9CUU3 1500 aa30.22■■■□□ 2.43
Hoxc4-202ENSMUST00000165375 Ccdc180J3QNE4 1664 aa30.19■■■□□ 2.42
Hoxc4-202ENSMUST00000165375 Baz1aO88379 1555 aa30.13■■■□□ 2.41
Hoxc4-202ENSMUST00000165375 Crybg2B7ZCC2 1516 aa29.91■■■□□ 2.38
Hoxc4-202ENSMUST00000165375 Rtl1Q7M732 1744 aa29.76■■■□□ 2.35
Hoxc4-202ENSMUST00000165375 BicraF8VPZ9 1578 aa29.63■■■□□ 2.33
Hoxc4-202ENSMUST00000165375 Zcchc6Q5BLK4 1491 aaKnown RBP29.57■■■□□ 2.32
Hoxc4-202ENSMUST00000165375 Smarca2Q6DIC0 1577 aa29.33■■■□□ 2.29
Hoxc4-202ENSMUST00000165375 Ccdc136Q3TVA9 1136 aa29.04■■■□□ 2.24
Hoxc4-202ENSMUST00000165375 Cecr2E9Q2Z1 1453 aa28.9■■■□□ 2.22
Hoxc4-202ENSMUST00000165375 Pds5bQ4VA53 1446 aaKnown RBP28.67■■■□□ 2.18
Hoxc4-202ENSMUST00000165375 Smarca4Q3TKT4 1613 aaKnown RBP28.67■■■□□ 2.18
Hoxc4-202ENSMUST00000165375 Trim41Q5NCC3 630 aa28.66■■■□□ 2.18
Hoxc4-202ENSMUST00000165375 Brd4Q9ESU6 1400 aaKnown RBP28.63■■■□□ 2.17
Hoxc4-202ENSMUST00000165375 Atad2bE9Q166 1460 aaKnown RBP28.58■■■□□ 2.17
Hoxc4-202ENSMUST00000165375 Synj1Q8CHC4 1574 aa28.42■■■□□ 2.14
Hoxc4-202ENSMUST00000165375 CftrP26361 1476 aa28.42■■■□□ 2.14
Hoxc4-202ENSMUST00000165375 Rpgrip1Q9EPQ2 1331 aa28.38■■■□□ 2.13
Hoxc4-202ENSMUST00000165375 Iqgap2Q3UQ44 1575 aa28.38■■■□□ 2.13
Hoxc4-202ENSMUST00000165375 Cttnbp2B9EJA2 1648 aa28.31■■■□□ 2.12
Hoxc4-202ENSMUST00000165375 Esf1Q3V1V3 845 aaKnown RBP28.09■■■□□ 2.09
Hoxc4-202ENSMUST00000165375 Ercc6F8VPZ5 1481 aa28.07■■■□□ 2.08
Hoxc4-202ENSMUST00000165375 Thoc2B1AZI6 1594 aaKnown RBP28■■■□□ 2.07
Hoxc4-202ENSMUST00000165375 Wdr62Q3U3T8 1523 aa27.99■■■□□ 2.07
Hoxc4-202ENSMUST00000165375 Frmpd1A2AKB4 1549 aa27.98■■■□□ 2.07
Hoxc4-202ENSMUST00000165375 Golga3P55937 1487 aa27.94■■■□□ 2.06
Hoxc4-202ENSMUST00000165375 Cngb1E1AZ71 1325 aa27.88■■■□□ 2.05
Hoxc4-202ENSMUST00000165375 HrcG5E8J6 738 aa27.88■■■□□ 2.05
Hoxc4-202ENSMUST00000165375 Top2bQ64511 1612 aa27.73■■■□□ 2.03
Hoxc4-202ENSMUST00000165375 Phldb1Q6PDH0 1371 aaKnown RBP27.66■■■□□ 2.02
Hoxc4-202ENSMUST00000165375 Cc2d2aQ8CFW7 1633 aa27.63■■■□□ 2.01
Hoxc4-202ENSMUST00000165375 Fam135aQ6NS59 1506 aa27.57■■■□□ 2
Hoxc4-202ENSMUST00000165375 Unc13aQ4KUS2 1712 aa27.55■■■□□ 2
Hoxc4-202ENSMUST00000165375 Dnajc5bQ9CQ94 199 aa27.55■■■□□ 2
Hoxc4-202ENSMUST00000165375 Rsf1E9PWW9 1441 aaKnown RBP27.48■■□□□ 1.99
Hoxc4-202ENSMUST00000165375 Fmn1Q05860 1466 aa27.43■■□□□ 1.98
Hoxc4-202ENSMUST00000165375 Ccdc88bQ4QRL3 1481 aa27.42■■□□□ 1.98
Hoxc4-202ENSMUST00000165375 Ubl4bQ9CQ84 188 aa27.42■■□□□ 1.98
Hoxc4-202ENSMUST00000165375 Chic1Q8CBW7 227 aa27.4■■□□□ 1.98
Hoxc4-202ENSMUST00000165375 Lamc3Q9R0B6 1581 aa27.36■■□□□ 1.97
Hoxc4-202ENSMUST00000165375 Cep164Q5DU05 1446 aa27.35■■□□□ 1.97
Hoxc4-202ENSMUST00000165375 Kif15Q6P9L6 1387 aa27.33■■□□□ 1.97
Hoxc4-202ENSMUST00000165375 TnnQ80Z71 1560 aa27.29■■□□□ 1.96
Hoxc4-202ENSMUST00000165375 Acin1Q9JIX8 1338 aaKnown RBP27.29■■□□□ 1.96
Hoxc4-202ENSMUST00000165375 Baz1bQ9Z277 1479 aa27.28■■□□□ 1.96
Hoxc4-202ENSMUST00000165375 Cux2P70298 1426 aa27.1■■□□□ 1.93
Hoxc4-202ENSMUST00000165375 Top2aQ01320 1528 aaKnown RBP27.06■■□□□ 1.92
Hoxc4-202ENSMUST00000165375 Ccdc18Q640L5 1455 aa26.99■■□□□ 1.91
Hoxc4-202ENSMUST00000165375 Mrc2Q64449 1479 aa26.97■■□□□ 1.91
Hoxc4-202ENSMUST00000165375 Camsap1A2AHC3 1581 aa26.95■■□□□ 1.91
Hoxc4-202ENSMUST00000165375 Npm1Q61937 292 aaKnown RBP26.95■■□□□ 1.91
Hoxc4-202ENSMUST00000165375 Il27Q8K3I6 234 aa26.95■■□□□ 1.91
Hoxc4-202ENSMUST00000165375 Gab3Q8BSM5 595 aa26.92■■□□□ 1.9
Hoxc4-202ENSMUST00000165375 LrpprcQ6PB66 1392 aaKnown RBP26.72■■□□□ 1.87
Hoxc4-202ENSMUST00000165375 Grin2bQ01097 1482 aa26.71■■□□□ 1.87
Hoxc4-202ENSMUST00000165375 Rapgef2Q8CHG7 1496 aa26.66■■□□□ 1.86
Hoxc4-202ENSMUST00000165375 NrkQ9R0G8 1455 aa26.66■■□□□ 1.86
Hoxc4-202ENSMUST00000165375 PogzQ8BZH4 1409 aaKnown RBP26.61■■□□□ 1.85
Hoxc4-202ENSMUST00000165375 Kif21aQ9QXL2 1672 aa26.6■■□□□ 1.85
Hoxc4-202ENSMUST00000165375 Pcgf6Q99NA9 353 aa26.6■■□□□ 1.85
Hoxc4-202ENSMUST00000165375 Dhx29Q6PGC1 1365 aaKnown RBP26.59■■□□□ 1.85
Hoxc4-202ENSMUST00000165375 Npm2Q80W85 207 aa26.59■■□□□ 1.85
Hoxc4-202ENSMUST00000165375 PtprkP35822 1457 aa26.57■■□□□ 1.84
Hoxc4-202ENSMUST00000165375 Shroom4Q1W617 1475 aa26.57■■□□□ 1.84
Hoxc4-202ENSMUST00000165375 Efcab5A0JP43 1406 aa26.53■■□□□ 1.84
Hoxc4-202ENSMUST00000165375 Duox2A2AQ99 1517 aa26.52■■□□□ 1.84
Hoxc4-202ENSMUST00000165375 Cep162Q6ZQ06 1403 aa26.47■■□□□ 1.83
Hoxc4-202ENSMUST00000165375 Crocc2F6XLV1 1638 aa26.43■■□□□ 1.82
Hoxc4-202ENSMUST00000165375 Eif4g1Q6NZJ6 1600 aaKnown RBP26.34■■□□□ 1.81
Hoxc4-202ENSMUST00000165375 Arhgap35Q91YM2 1499 aa26.32■■□□□ 1.8
Hoxc4-202ENSMUST00000165375 Plb1Q3TTY0 1478 aa26.32■■□□□ 1.8
Hoxc4-202ENSMUST00000165375 Zeb1Q64318 1117 aa26.29■■□□□ 1.8
Hoxc4-202ENSMUST00000165375 Myt1lP97500 1187 aa26.28■■□□□ 1.8
Hoxc4-202ENSMUST00000165375 Urb2E9Q7L1 1524 aaKnown RBP26.28■■□□□ 1.8
Hoxc4-202ENSMUST00000165375 Lrriq1Q0P5X1 1673 aa26.27■■□□□ 1.8
Hoxc4-202ENSMUST00000165375 Mroh2bQ7M6Y6 1581 aa26.27■■□□□ 1.8
Hoxc4-202ENSMUST00000165375 Samd9lQ69Z37 1561 aa26.26■■□□□ 1.79
Hoxc4-202ENSMUST00000165375 Map3k1P53349 1493 aa26.24■■□□□ 1.79
Hoxc4-202ENSMUST00000165375 SynmQ70IV5 1561 aa26.14■■□□□ 1.77
Hoxc4-202ENSMUST00000165375 Ehmt2Q9Z148 1263 aaKnown RBP26.14■■□□□ 1.77
Hoxc4-202ENSMUST00000165375 Rad54l2Q99NG0 1466 aa26.13■■□□□ 1.77
Hoxc4-202ENSMUST00000165375 Ift140E9PY46 1464 aa26.13■■□□□ 1.77
Hoxc4-202ENSMUST00000165375 Clip1Q922J3 1391 aa26.11■■□□□ 1.77
Hoxc4-202ENSMUST00000165375 Disp1Q3TDN0 1521 aa26.1■■□□□ 1.77
Hoxc4-202ENSMUST00000165375 AqrQ8CFQ3 1481 aaKnown RBP26.09■■□□□ 1.77
Hoxc4-202ENSMUST00000165375 Carmil1Q6EDY6 1374 aa26.06■■□□□ 1.76
Hoxc4-202ENSMUST00000165375 Magi3Q9EQJ9 1476 aa25.99■■□□□ 1.75
Hoxc4-202ENSMUST00000165375 Grin2aP35436 1464 aa25.97■■□□□ 1.75
Hoxc4-202ENSMUST00000165375 Pla2r1Q62028 1487 aa25.95■■□□□ 1.74
Hoxc4-202ENSMUST00000165375 Pbrm1Q8BSQ9 1634 aaKnown RBP25.94■■□□□ 1.74
Retrieved 100 of 22,080 RNA–protein pairs in 104.6 ms