RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Col4a4Q9QZR9 1682 aa11.79□□□□□ -0.52
Pcf11-201ENSMUST00000119954 Gm10772F7AIG4 85 aa11.79□□□□□ -0.52
Pcf11-201ENSMUST00000119954 Spata3Q9D9T6 193 aa11.77□□□□□ -0.52
Pcf11-201ENSMUST00000119954 Gm11213A0A1B0GR83 88 aa11.76□□□□□ -0.53
Pcf11-201ENSMUST00000119954 Krtap24-1G3X9A2 248 aa11.74□□□□□ -0.53
Pcf11-201ENSMUST00000119954 Lrp4Q8VI56 1905 aa11.73□□□□□ -0.53
Pcf11-201ENSMUST00000119954 Eif4ebp3Q80VV3 101 aa11.73□□□□□ -0.53
Pcf11-201ENSMUST00000119954 Tln1P26039 2541 aaKnown RBP11.71□□□□□ -0.54
Pcf11-201ENSMUST00000119954 CriptO70333 101 aa11.7□□□□□ -0.54
Pcf11-201ENSMUST00000119954 Fam168bQ80XQ8 194 aa11.7□□□□□ -0.54
Pcf11-201ENSMUST00000119954 Krtap26-1Q9D7N2 215 aa11.7□□□□□ -0.54
Pcf11-201ENSMUST00000119954 AY074887Q8R5F9 132 aa11.67□□□□□ -0.54
Pcf11-201ENSMUST00000119954 A330070K13RikQ8CA53 115 aa11.66□□□□□ -0.54
Pcf11-201ENSMUST00000119954 Sprr4Q8CGN8 76 aa11.64□□□□□ -0.55
Pcf11-201ENSMUST00000119954 Zfp462B1AWL2 2495 aaKnown RBP11.62□□□□□ -0.55
Pcf11-201ENSMUST00000119954 Chtf8P0CG14 533 aa11.61□□□□□ -0.55
Pcf11-201ENSMUST00000119954 Cypt15B1AXS0 87 aa11.6□□□□□ -0.55
Pcf11-201ENSMUST00000119954 Krtap11-1E9Q2E9 183 aa11.6□□□□□ -0.55
Pcf11-201ENSMUST00000119954 Usp9xP70398 2559 aaKnown RBP11.6□□□□□ -0.55
Pcf11-201ENSMUST00000119954 Gm7276Q3TYW4 209 aa11.58□□□□□ -0.56
Pcf11-201ENSMUST00000119954 Gm21798J3QNU5 87 aa11.54□□□□□ -0.56
Pcf11-201ENSMUST00000119954 Piezo2Q8CD54 2822 aa11.54□□□□□ -0.56
Pcf11-201ENSMUST00000119954 Sprr1bQ62267 153 aa11.52□□□□□ -0.57
Pcf11-201ENSMUST00000119954 Col27a1Q5QNQ9 1845 aa11.51□□□□□ -0.57
Pcf11-201ENSMUST00000119954 CnbpP53996 178 aaKnown RBP11.5□□□□□ -0.57
Pcf11-201ENSMUST00000119954 Chd8Q09XV5 2582 aaKnown RBP11.49□□□□□ -0.57
Pcf11-201ENSMUST00000119954 Col4a2P08122 1707 aa11.49□□□□□ -0.57
Pcf11-201ENSMUST00000119954 Fam229bQ8CF36 80 aa11.48□□□□□ -0.57
Pcf11-201ENSMUST00000119954 Ptpn13Q64512 2453 aa11.47□□□□□ -0.57
Pcf11-201ENSMUST00000119954 Anapc11Q9CPX9 84 aa11.46□□□□□ -0.57
Pcf11-201ENSMUST00000119954 Sptbn4E9PX29 2561 aa11.44□□□□□ -0.58
Pcf11-201ENSMUST00000119954 C530025M09RikF6RGA8 229 aa11.43□□□□□ -0.58
Pcf11-201ENSMUST00000119954 OxtP35454 125 aa11.43□□□□□ -0.58
Pcf11-201ENSMUST00000119954 2310034C09RikQ9D746 214 aa11.43□□□□□ -0.58
Pcf11-201ENSMUST00000119954 Gm3880A0A1B0GSB3 72 aa11.42□□□□□ -0.58
Pcf11-201ENSMUST00000119954 Plac8Q9JI48 112 aa11.41□□□□□ -0.58
Pcf11-201ENSMUST00000119954 Lypd5Q9D7Z7 256 aa11.4□□□□□ -0.58
Pcf11-201ENSMUST00000119954 Gm26620Q9CY65 116 aa11.39□□□□□ -0.59
Pcf11-201ENSMUST00000119954 Spink7Q6IE32 76 aa11.38□□□□□ -0.59
Pcf11-201ENSMUST00000119954 Setd2E9Q5F9 2537 aa11.38□□□□□ -0.59
Pcf11-201ENSMUST00000119954 Defb9Q8R2I6 67 aa11.36□□□□□ -0.59
Pcf11-201ENSMUST00000119954 Gm9955Q8CEJ8 102 aa11.36□□□□□ -0.59
Pcf11-201ENSMUST00000119954 Gm3233E9Q2H5 230 aa11.35□□□□□ -0.59
Pcf11-201ENSMUST00000119954 Piezo1E2JF22 2547 aa11.35□□□□□ -0.59
Pcf11-201ENSMUST00000119954 Gm9821Q8K076 103 aa11.31□□□□□ -0.6
Pcf11-201ENSMUST00000119954 Cep192E9Q4Y4 2514 aaKnown RBP11.31□□□□□ -0.6
Pcf11-201ENSMUST00000119954 Col5a1O88207 1838 aa11.3□□□□□ -0.6
Pcf11-201ENSMUST00000119954 Fam104aA2A6P4 185 aa11.29□□□□□ -0.6
Pcf11-201ENSMUST00000119954 AW011738F6S7Q2 159 aa11.28□□□□□ -0.6
Pcf11-201ENSMUST00000119954 MtorQ9JLN9 2549 aa11.23□□□□□ -0.61
Pcf11-201ENSMUST00000119954 TrrapQ80YV3 2565 aaKnown RBP11.22□□□□□ -0.61
Pcf11-201ENSMUST00000119954 6030445D17RikE9Q8F9 148 aa11.2□□□□□ -0.62
Pcf11-201ENSMUST00000119954 Epg5Q80TA9 2572 aa11.19□□□□□ -0.62
Pcf11-201ENSMUST00000119954 Zcchc13Q9D548 170 aa11.18□□□□□ -0.62
Pcf11-201ENSMUST00000119954 Nbeal1E9PYP2 2688 aa11.17□□□□□ -0.62
Pcf11-201ENSMUST00000119954 Cypt14J3QPF7 87 aa11.15□□□□□ -0.62
Pcf11-201ENSMUST00000119954 Gm7138L7N2C3 230 aa11.11□□□□□ -0.63
Pcf11-201ENSMUST00000119954 Gm3238W4VSP7 230 aa11.11□□□□□ -0.63
Pcf11-201ENSMUST00000119954 Bahcc1Q3UHR0 2643 aa11.09□□□□□ -0.63
Pcf11-201ENSMUST00000119954 Usp9yF8VPU6 2556 aa11.09□□□□□ -0.63
Pcf11-201ENSMUST00000119954 Dmbt1Q60997 2085 aa11.09□□□□□ -0.63
Pcf11-201ENSMUST00000119954 Gm3646F6S692 53 aa11.07□□□□□ -0.64
Pcf11-201ENSMUST00000119954 Gm7137J3QMW1 236 aa11.06□□□□□ -0.64
Pcf11-201ENSMUST00000119954 Gm4491E0CX42 125 aa11.05□□□□□ -0.64
Pcf11-201ENSMUST00000119954 SetxA2AKX3 2646 aa11.04□□□□□ -0.64
Pcf11-201ENSMUST00000119954 Smim29Q8R043 75 aa11.04□□□□□ -0.64
Pcf11-201ENSMUST00000119954 Krtap15-1Q9QZU5 150 aa11□□□□□ -0.65
Pcf11-201ENSMUST00000119954 Cystm1Q8K353 104 aa10.97□□□□□ -0.65
Pcf11-201ENSMUST00000119954 Gm10320E9PW43 113 aa10.97□□□□□ -0.65
Pcf11-201ENSMUST00000119954 CicQ924A2 2510 aa10.97□□□□□ -0.65
Pcf11-201ENSMUST00000119954 NbdyA0A0N4SUI7 68 aa10.96□□□□□ -0.65
Pcf11-201ENSMUST00000119954 Camk2n1Q6QWF9 78 aa10.92□□□□□ -0.66
Pcf11-201ENSMUST00000119954 Gm10065F6TJM2 114 aa10.87□□□□□ -0.67
Pcf11-201ENSMUST00000119954 Fam229aB2KGE5 128 aa10.86□□□□□ -0.67
Pcf11-201ENSMUST00000119954 1700042G07RikB1AUF7 90 aa10.83□□□□□ -0.68
Pcf11-201ENSMUST00000119954 Romo1P60603 79 aa10.82□□□□□ -0.68
Pcf11-201ENSMUST00000119954 Gm37013Q8K491 104 aa10.82□□□□□ -0.68
Pcf11-201ENSMUST00000119954 Gm10139O88245 57 aa10.79□□□□□ -0.68
Pcf11-201ENSMUST00000119954 Unc79Q0KK59 2596 aa10.79□□□□□ -0.68
Pcf11-201ENSMUST00000119954 Odf3bQ5M8M2 238 aa10.79□□□□□ -0.68
Pcf11-201ENSMUST00000119954 Rpl37Q9D823 97 aa10.78□□□□□ -0.68
Pcf11-201ENSMUST00000119954 Gm9508A0A1W2P7W0 230 aa10.78□□□□□ -0.68
Pcf11-201ENSMUST00000119954 Myo18bE9PV66 2605 aa10.76□□□□□ -0.69
Pcf11-201ENSMUST00000119954 Abca12E9Q876 2595 aa10.75□□□□□ -0.69
Pcf11-201ENSMUST00000119954 4933415A04RikQ9D443 101 aa10.71□□□□□ -0.69
Pcf11-201ENSMUST00000119954 Ankrd11E9Q4F7 2643 aa10.71□□□□□ -0.69
Pcf11-201ENSMUST00000119954 Fn1P11276 2477 aaKnown RBP10.71□□□□□ -0.7
Pcf11-201ENSMUST00000119954 A730071L15RikQ8C4X0 137 aa10.68□□□□□ -0.7
Pcf11-201ENSMUST00000119954 Golgb1E9PVZ8 3238 aa10.66□□□□□ -0.7
Pcf11-201ENSMUST00000119954 FasnP19096 2504 aaKnown RBP10.66□□□□□ -0.7
Pcf11-201ENSMUST00000119954 Gm16253D3Z167 63 aa10.65□□□□□ -0.7
Pcf11-201ENSMUST00000119954 Ankrd17Q99NH0 2603 aaKnown RBP10.65□□□□□ -0.7
Pcf11-201ENSMUST00000119954 Gm10382Q3V0T5 144 aa10.65□□□□□ -0.71
Pcf11-201ENSMUST00000119954 HrnrQ8VHD8 2496 aa10.63□□□□□ -0.71
Pcf11-201ENSMUST00000119954 Nsd1O88491 2588 aaKnown RBP10.61□□□□□ -0.71
Pcf11-201ENSMUST00000119954 Sec61bQ9CQS8 96 aaKnown RBP10.61□□□□□ -0.71
Pcf11-201ENSMUST00000119954 SrcapA0A087WQ44 3271 aa10.6□□□□□ -0.71
Pcf11-201ENSMUST00000119954 Usp24B1AY13 2617 aaKnown RBP10.59□□□□□ -0.71
Pcf11-201ENSMUST00000119954 Gm17349F7BGH6 99 aa10.59□□□□□ -0.71
Pcf11-201ENSMUST00000119954 Sprr1aQ62266 144 aa10.58□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 84.4 ms