RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 Defb45Q3V490 66 aa9.68□□□□□ -0.86
Col2a1-202ENSMUST00000088355 Akap13E9Q394 2776 aa9.68□□□□□ -0.86
Col2a1-202ENSMUST00000088355 2310034G01RikA0A286YDL3 209 aa9.67□□□□□ -0.86
Col2a1-202ENSMUST00000088355 Gm19935A0A1B0GSF9 52 aa9.66□□□□□ -0.86
Col2a1-202ENSMUST00000088355 Mrpl34Q99N91 92 aa9.65□□□□□ -0.86
Col2a1-202ENSMUST00000088355 AI606181Q8C7B9 129 aa9.65□□□□□ -0.86
Col2a1-202ENSMUST00000088355 Prol1E9PYQ4 312 aa9.65□□□□□ -0.87
Col2a1-202ENSMUST00000088355 Mast4Q811L6 2618 aa9.64□□□□□ -0.87
Col2a1-202ENSMUST00000088355 Phf5aP83870 110 aaKnown RBP9.64□□□□□ -0.87
Col2a1-202ENSMUST00000088355 Gm21886J3QJU9 214 aa9.63□□□□□ -0.87
Col2a1-202ENSMUST00000088355 Elof1P60003 83 aa9.63□□□□□ -0.87
Col2a1-202ENSMUST00000088355 Gm11565A2A4M7 156 aa9.63□□□□□ -0.87
Col2a1-202ENSMUST00000088355 9230102O04RikA2ASX7 82 aa9.62□□□□□ -0.87
Col2a1-202ENSMUST00000088355 AplnQ9R0R4 77 aa9.62□□□□□ -0.87
Col2a1-202ENSMUST00000088355 Col12a1Q60847 3120 aa9.62□□□□□ -0.87
Col2a1-202ENSMUST00000088355 Chd7A2AJK6 2986 aaKnown RBP9.61□□□□□ -0.87
Col2a1-202ENSMUST00000088355 Ighv2-5A0A0A6YY69 116 aa9.61□□□□□ -0.87
Col2a1-202ENSMUST00000088355 Gm10570F6VB42 170 aa9.61□□□□□ -0.87
Col2a1-202ENSMUST00000088355 Cdip1Q9DB75 208 aa9.6□□□□□ -0.87
Col2a1-202ENSMUST00000088355 Gm3233E9Q2H5 230 aa9.6□□□□□ -0.87
Col2a1-202ENSMUST00000088355 H2al1kJ3QP08 105 aa9.6□□□□□ -0.87
Col2a1-202ENSMUST00000088355 SnurfQ9WU12 71 aa9.6□□□□□ -0.87
Col2a1-202ENSMUST00000088355 Nsd1O88491 2588 aaKnown RBP9.59□□□□□ -0.87
Col2a1-202ENSMUST00000088355 Coa6Q8BGD8 79 aa9.58□□□□□ -0.88
Col2a1-202ENSMUST00000088355 Lypd5Q9D7Z7 256 aa9.58□□□□□ -0.88
Col2a1-202ENSMUST00000088355 Prrc2cQ3TLH4 2846 aaKnown RBP9.58□□□□□ -0.88
Col2a1-202ENSMUST00000088355 Gpr15lA0A0B4J1N3 78 aa9.57□□□□□ -0.88
Col2a1-202ENSMUST00000088355 Gm44790A0A0N4SV91 103 aa9.57□□□□□ -0.88
Col2a1-202ENSMUST00000088355 Igkv8-27A0A0G2JF28 120 aa9.56□□□□□ -0.88
Col2a1-202ENSMUST00000088355 6430550D23RikE9Q1X6 194 aa9.56□□□□□ -0.88
Col2a1-202ENSMUST00000088355 Gm27235Q3UW50 83 aa9.55□□□□□ -0.88
Col2a1-202ENSMUST00000088355 Ighv2-2A0A075B5P8 116 aa9.54□□□□□ -0.88
Col2a1-202ENSMUST00000088355 P01821 116 aa9.54□□□□□ -0.88
Col2a1-202ENSMUST00000088355 Stab1Q8R4Y4 2571 aa9.54□□□□□ -0.88
Col2a1-202ENSMUST00000088355 RetnlbQ99P86 105 aa9.54□□□□□ -0.88
Col2a1-202ENSMUST00000088355 Spaca4Q80ZQ0 127 aa9.54□□□□□ -0.88
Col2a1-202ENSMUST00000088355 OxtP35454 125 aa9.53□□□□□ -0.88
Col2a1-202ENSMUST00000088355 Defb50Q6TU36 73 aa9.52□□□□□ -0.89
Col2a1-202ENSMUST00000088355 Sprr4Q8CGN8 76 aa9.52□□□□□ -0.89
Col2a1-202ENSMUST00000088355 Bean1Q9EQG5 255 aa9.52□□□□□ -0.89
Col2a1-202ENSMUST00000088355 Map1aQ9QYR6 2776 aa9.52□□□□□ -0.89
Col2a1-202ENSMUST00000088355 Gm5617Q91VN2 117 aa9.51□□□□□ -0.89
Col2a1-202ENSMUST00000088355 Gm10770F7D043 238 aa9.51□□□□□ -0.89
Col2a1-202ENSMUST00000088355 Krtap11-1E9Q2E9 183 aa9.5□□□□□ -0.89
Col2a1-202ENSMUST00000088355 Gm10160F6Y577 67 aa9.5□□□□□ -0.89
Col2a1-202ENSMUST00000088355 Fam168bQ80XQ8 194 aa9.49□□□□□ -0.89
Col2a1-202ENSMUST00000088355 AI854703Q8BIN3 203 aa9.48□□□□□ -0.89
Col2a1-202ENSMUST00000088355 Gm17689B3GLJ4 109 aa9.48□□□□□ -0.89
Col2a1-202ENSMUST00000088355 Gm10337F7DEP7 55 aa9.48□□□□□ -0.89
Col2a1-202ENSMUST00000088355 4930518I15RikQ3V2W7 57 aa9.48□□□□□ -0.89
Col2a1-202ENSMUST00000088355 Gm17606F6ZL36 78 aa9.47□□□□□ -0.89
Col2a1-202ENSMUST00000088355 Fbn2Q61555 2907 aa9.46□□□□□ -0.89
Col2a1-202ENSMUST00000088355 Cdh23Q99PF4 3354 aa9.46□□□□□ -0.89
Col2a1-202ENSMUST00000088355 Q8BT88 171 aa9.46□□□□□ -0.9
Col2a1-202ENSMUST00000088355 Gm10999F6Q4M4 69 aa9.45□□□□□ -0.9
Col2a1-202ENSMUST00000088355 Sprr1bQ62267 153 aa9.45□□□□□ -0.9
Col2a1-202ENSMUST00000088355 Rpl37aP61514 92 aa9.45□□□□□ -0.9
Col2a1-202ENSMUST00000088355 Chd6A3KFM7 2711 aa9.44□□□□□ -0.9
Col2a1-202ENSMUST00000088355 Dmxl1Q6PNC0 3013 aa9.44□□□□□ -0.9
Col2a1-202ENSMUST00000088355 Kmt2bO08550 2713 aa9.44□□□□□ -0.9
Col2a1-202ENSMUST00000088355 Gm10197F6QEY5 67 aa9.43□□□□□ -0.9
Col2a1-202ENSMUST00000088355 Rev3lQ61493 3122 aa9.43□□□□□ -0.9
Col2a1-202ENSMUST00000088355 Lelp1Q9DAE3 120 aa9.41□□□□□ -0.9
Col2a1-202ENSMUST00000088355 Ash1lQ99MY8 2958 aa9.41□□□□□ -0.9
Col2a1-202ENSMUST00000088355 A930002H24RikQ8C8Y3 163 aa9.4□□□□□ -0.9
Col2a1-202ENSMUST00000088355 AY074887Q8R5F9 132 aa9.4□□□□□ -0.9
Col2a1-202ENSMUST00000088355 KalrnA2CG49 2964 aa9.4□□□□□ -0.9
Col2a1-202ENSMUST00000088355 Ubr5Q80TP3 2792 aa9.4□□□□□ -0.9
Col2a1-202ENSMUST00000088355 MgaA2AWL7 3003 aaKnown RBP9.4□□□□□ -0.91
Col2a1-202ENSMUST00000088355 NipblQ6KCD5 2798 aaKnown RBP9.39□□□□□ -0.91
Col2a1-202ENSMUST00000088355 Gm9195A0A140LHT4 2805 aa9.38□□□□□ -0.91
Col2a1-202ENSMUST00000088355 Eif4ebp3Q80VV3 101 aa9.38□□□□□ -0.91
Col2a1-202ENSMUST00000088355 HrnrQ8VHD8 2496 aa9.37□□□□□ -0.91
Col2a1-202ENSMUST00000088355 Bod1lE9Q6J5 3032 aa9.36□□□□□ -0.91
Col2a1-202ENSMUST00000088355 Igsf10Q3V1M1 2594 aa9.35□□□□□ -0.91
Col2a1-202ENSMUST00000088355 Dmbt1Q60997 2085 aa9.35□□□□□ -0.91
Col2a1-202ENSMUST00000088355 Krtap16-1A2A5X5 502 aa9.34□□□□□ -0.91
Col2a1-202ENSMUST00000088355 Cfap54Q8C6S9 3106 aa9.34□□□□□ -0.91
Col2a1-202ENSMUST00000088355 Vps13aQ5H8C4 3166 aa9.34□□□□□ -0.91
Col2a1-202ENSMUST00000088355 4930507D05RikQ8C9C9 103 aa9.33□□□□□ -0.92
Col2a1-202ENSMUST00000088355 CnbpP53996 178 aaKnown RBP9.33□□□□□ -0.92
Col2a1-202ENSMUST00000088355 Spint4Q9D263 159 aa9.33□□□□□ -0.92
Col2a1-202ENSMUST00000088355 Gm10308Q9CVR5 141 aa9.32□□□□□ -0.92
Col2a1-202ENSMUST00000088355 AtmQ62388 3066 aa9.32□□□□□ -0.92
Col2a1-202ENSMUST00000088355 Plac8Q9JI48 112 aa9.32□□□□□ -0.92
Col2a1-202ENSMUST00000088355 Gm7138L7N2C3 230 aa9.31□□□□□ -0.92
Col2a1-202ENSMUST00000088355 Gm3238W4VSP7 230 aa9.31□□□□□ -0.92
Col2a1-202ENSMUST00000088355 Defb9Q8R2I6 67 aa9.29□□□□□ -0.92
Col2a1-202ENSMUST00000088355 Gm11213A0A1B0GR83 88 aa9.28□□□□□ -0.92
Col2a1-202ENSMUST00000088355 Gm7276Q3TYW4 209 aa9.28□□□□□ -0.92
Col2a1-202ENSMUST00000088355 Itpr3P70227 2670 aa9.28□□□□□ -0.92
Col2a1-202ENSMUST00000088355 C530025M09RikF6RGA8 229 aa9.28□□□□□ -0.92
Col2a1-202ENSMUST00000088355 Q8BGJ3 129 aa9.28□□□□□ -0.92
Col2a1-202ENSMUST00000088355 Gm7137J3QMW1 236 aa9.27□□□□□ -0.92
Col2a1-202ENSMUST00000088355 Szt2A2A9C3 3431 aa9.27□□□□□ -0.93
Col2a1-202ENSMUST00000088355 Phxr5P08399 672 aa9.25□□□□□ -0.93
Col2a1-202ENSMUST00000088355 Defb1P56386 69 aa9.25□□□□□ -0.93
Col2a1-202ENSMUST00000088355 AspmQ8CJ27 3122 aa9.23□□□□□ -0.93
Col2a1-202ENSMUST00000088355 A530084C06RikQ3UTW2 186 aa9.23□□□□□ -0.93
Col2a1-202ENSMUST00000088355 Limd2Q8BGB5 128 aa9.23□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 183.7 ms