RNA–Protein interactions for RNA: ENSMUST00000036992.8

Lmo1-201, Transcript of Rhombotin-1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Lmo1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo1-201ENSMUST00000036992 Gm29289A0A087WPY7 166 aa11.5□□□□□ -0.57
Lmo1-201ENSMUST00000036992 Igkv8-18A0A0B4J1J3 123 aa11.49□□□□□ -0.57
Lmo1-201ENSMUST00000036992 Igkv3-7A0A0G2JE31 119 aa11.49□□□□□ -0.57
Lmo1-201ENSMUST00000036992 Gm9736A0A1W2P7N1 277 aa11.49□□□□□ -0.57
Lmo1-201ENSMUST00000036992 Gm27235Q3UW50 83 aa11.49□□□□□ -0.57
Lmo1-201ENSMUST00000036992 Triap1Q9D8Z2 76 aa11.49□□□□□ -0.57
Lmo1-201ENSMUST00000036992 Ccdc179J3QM76 67 aa11.48□□□□□ -0.57
Lmo1-201ENSMUST00000036992 H2al1nQ497L1 109 aa11.48□□□□□ -0.57
Lmo1-201ENSMUST00000036992 Defb39Q70KL3 74 aa11.48□□□□□ -0.57
Lmo1-201ENSMUST00000036992 Scgb1b3J3QJY4 93 aa11.46□□□□□ -0.57
Lmo1-201ENSMUST00000036992 Tma7Q8K003 64 aaKnown RBP11.46□□□□□ -0.57
Lmo1-201ENSMUST00000036992 Q8K1L6 76 aa11.46□□□□□ -0.57
Lmo1-201ENSMUST00000036992 Slamf6Q9ET39 351 aa11.46□□□□□ -0.57
Lmo1-201ENSMUST00000036992 Cend1Q9JKC6 149 aa11.46□□□□□ -0.57
Lmo1-201ENSMUST00000036992 Cited4Q9WUL8 182 aa11.46□□□□□ -0.57
Lmo1-201ENSMUST00000036992 5730596B20RikQ8BQ08 205 aa11.45□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Ociad2Q9D8W7 154 aa11.45□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Cd164Q9R0L9 197 aa11.45□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Trav4n-4A0A075B615 110 aa11.44□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Igkv1-110A0A0B4J1I0 119 aa11.44□□□□□ -0.58
Lmo1-201ENSMUST00000036992 C920008G01RikA0A0B4J1N1 112 aa11.44□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Tcl1b3P56842 122 aa11.44□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Trappc1Q5NCF2 145 aa11.44□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Gnb1lQ9EQ15 326 aa11.44□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Gm5153P01627 120 aa11.43□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Gm10295Q8CCF3 114 aa11.43□□□□□ -0.58
Lmo1-201ENSMUST00000036992 4930415O20RikQ8CDT5 131 aa11.43□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Spata45Q9CVW4 97 aa11.43□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Bean1Q9EQG5 255 aa11.43□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Dpm2Q9Z324 84 aa11.43□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Hbb-bsA8DUK4 147 aa11.42□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Hbb-b1P02088 147 aa11.42□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Gm10577Q3UDV9 132 aa11.42□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Hist2h2beQ64524 126 aa11.42□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Lgals4Q8K419 326 aa11.42□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Plscr4P58196 326 aa11.4□□□□□ -0.58
Lmo1-201ENSMUST00000036992 TeppQ6IMH0 216 aa11.4□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Timm17bQ9Z0V7 172 aa11.4□□□□□ -0.58
Lmo1-201ENSMUST00000036992 Anapc11Q9CPX9 84 aa11.39□□□□□ -0.59
Lmo1-201ENSMUST00000036992 Phpt1Q9DAK9 124 aa11.39□□□□□ -0.59
Lmo1-201ENSMUST00000036992 Msrb1Q9JLC3 116 aa11.39□□□□□ -0.59
Lmo1-201ENSMUST00000036992 2310034G01RikA0A286YDL3 209 aa11.38□□□□□ -0.59
Lmo1-201ENSMUST00000036992 BC048502Q80Y74 154 aa11.38□□□□□ -0.59
Lmo1-201ENSMUST00000036992 AI606181Q8C7B9 129 aa11.38□□□□□ -0.59
Lmo1-201ENSMUST00000036992 Csdc2Q91YQ3 154 aa11.38□□□□□ -0.59
Lmo1-201ENSMUST00000036992 Glrp1E9Q9S8 174 aa11.36□□□□□ -0.59
Lmo1-201ENSMUST00000036992 Gm9805F6YK59 57 aa11.36□□□□□ -0.59
Lmo1-201ENSMUST00000036992 Lst1O08843 95 aa11.35□□□□□ -0.59
Lmo1-201ENSMUST00000036992 IqcjQ8BPW0 110 aa11.35□□□□□ -0.59
Lmo1-201ENSMUST00000036992 Defb12Q8K4N3 78 aa11.35□□□□□ -0.59
Lmo1-201ENSMUST00000036992 Pam16Q9CQV1 125 aa11.35□□□□□ -0.59
Lmo1-201ENSMUST00000036992 Trav4d-3A0A075B625 110 aa11.34□□□□□ -0.59
Lmo1-201ENSMUST00000036992 LbhQ9CX60 105 aa11.34□□□□□ -0.59
Lmo1-201ENSMUST00000036992 Igkv1-117A0A140T8M0 119 aa11.33□□□□□ -0.6
Lmo1-201ENSMUST00000036992 Smim1P0C8K7 78 aa11.33□□□□□ -0.6
Lmo1-201ENSMUST00000036992 P0C913 63 aa11.33□□□□□ -0.6
Lmo1-201ENSMUST00000036992 Cops9Q3U898 57 aa11.33□□□□□ -0.6
Lmo1-201ENSMUST00000036992 Q9DAA7 145 aa11.33□□□□□ -0.6
Lmo1-201ENSMUST00000036992 Ighv1-62-2A0A0A6YXZ4 119 aa11.31□□□□□ -0.6
Lmo1-201ENSMUST00000036992 MalO09198 153 aa11.31□□□□□ -0.6
Lmo1-201ENSMUST00000036992 Gm10767Q3TQP0 103 aa11.31□□□□□ -0.6
Lmo1-201ENSMUST00000036992 Defa28D3Z1V9 94 aa11.3□□□□□ -0.6
Lmo1-201ENSMUST00000036992 Mrpl52Q9D0Y8 121 aa11.3□□□□□ -0.6
Lmo1-201ENSMUST00000036992 Scgb1b19F6WYW0 93 aa11.29□□□□□ -0.6
Lmo1-201ENSMUST00000036992 Defb45Q3V490 66 aa11.29□□□□□ -0.6
Lmo1-201ENSMUST00000036992 Odf3bQ5M8M2 238 aa11.29□□□□□ -0.6
Lmo1-201ENSMUST00000036992 Lage3Q9CR70 148 aa11.29□□□□□ -0.6
Lmo1-201ENSMUST00000036992 Wdr38Q9D994 303 aa11.29□□□□□ -0.6
Lmo1-201ENSMUST00000036992 E130218I03RikA0A0U1RNU5 63 aa11.28□□□□□ -0.6
Lmo1-201ENSMUST00000036992 Igkv3-5A0A140T8M6 119 aa11.28□□□□□ -0.6
Lmo1-201ENSMUST00000036992 Prm1P02319 51 aa11.28□□□□□ -0.6
Lmo1-201ENSMUST00000036992 Gm10770F7D043 238 aa11.27□□□□□ -0.61
Lmo1-201ENSMUST00000036992 Gm10139O88245 57 aa11.27□□□□□ -0.61
Lmo1-201ENSMUST00000036992 Gm28230A0A0A0MQ91 144 aa11.26□□□□□ -0.61
Lmo1-201ENSMUST00000036992 Ctxnd2A0A1B0GQX3 59 aa11.26□□□□□ -0.61
Lmo1-201ENSMUST00000036992 Gm7276Q3TYW4 209 aa11.25□□□□□ -0.61
Lmo1-201ENSMUST00000036992 Wfdc13Q5DQQ6 81 aa11.25□□□□□ -0.61
Lmo1-201ENSMUST00000036992 Znf706Q9D115 76 aaKnown RBP11.24□□□□□ -0.61
Lmo1-201ENSMUST00000036992 Trav13n-2A0A0G2JF93 110 aa11.23□□□□□ -0.61
Lmo1-201ENSMUST00000036992 Gm7735D3YX18 52 aa11.23□□□□□ -0.61
Lmo1-201ENSMUST00000036992 A930033H14RikG5E8X6 103 aa11.23□□□□□ -0.61
Lmo1-201ENSMUST00000036992 Igkv8-26A0A075B5N5 123 aa11.22□□□□□ -0.61
Lmo1-201ENSMUST00000036992 Ush2AQ2QI47 5193 aa11.21□□□□□ -0.62
Lmo1-201ENSMUST00000036992 Vamp8O70404 101 aa11.2□□□□□ -0.62
Lmo1-201ENSMUST00000036992 Defa25Q5G864 92 aa11.2□□□□□ -0.62
Lmo1-201ENSMUST00000036992 Igkv1-122A0A140T8M9 119 aa11.19□□□□□ -0.62
Lmo1-201ENSMUST00000036992 Elof1P60003 83 aa11.19□□□□□ -0.62
Lmo1-201ENSMUST00000036992 Eif4ebp3Q80VV3 101 aa11.19□□□□□ -0.62
Lmo1-201ENSMUST00000036992 Igkv4-58A0A0G2JGI6 119 aa11.18□□□□□ -0.62
Lmo1-201ENSMUST00000036992 Grcc10O35127 126 aa11.18□□□□□ -0.62
Lmo1-201ENSMUST00000036992 Ccl25O35903 144 aa11.16□□□□□ -0.62
Lmo1-201ENSMUST00000036992 SelenowP63300 88 aa11.16□□□□□ -0.62
Lmo1-201ENSMUST00000036992 Gm5142Q8C5X9 133 aa11.16□□□□□ -0.62
Lmo1-201ENSMUST00000036992 Uqcc3Q8K2T4 89 aa11.16□□□□□ -0.62
Lmo1-201ENSMUST00000036992 Gm9789Q8BIG3 52 aa11.15□□□□□ -0.62
Lmo1-201ENSMUST00000036992 Gm10320E9PW43 113 aa11.14□□□□□ -0.63
Lmo1-201ENSMUST00000036992 Defb37Q7TMD2 62 aa11.14□□□□□ -0.63
Lmo1-201ENSMUST00000036992 Gm5868Q8BJG1 145 aa11.14□□□□□ -0.63
Lmo1-201ENSMUST00000036992 A930002H24RikQ8C8Y3 163 aa11.14□□□□□ -0.63
Lmo1-201ENSMUST00000036992 Rpl32-psP17932 135 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms