RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Krtap24-1G3X9A2 248 aa12,51□□□□□ -0,41
Ebf3-201ENSMUST00000033378 Wfdc17Q5SSJ1 76 aa12,51□□□□□ -0,41
Ebf3-201ENSMUST00000033378 Chchd10Q7TNL9 138 aa12,51□□□□□ -0,41
Ebf3-201ENSMUST00000033378 1600014C23RikQ9DAX4 101 aa12,51□□□□□ -0,41
Ebf3-201ENSMUST00000033378 1810062G17RikG3X8Y2 129 aa12,5□□□□□ -0,41
Ebf3-201ENSMUST00000033378 Gm3250E9Q1M3 230 aa12,5□□□□□ -0,41
Ebf3-201ENSMUST00000033378 Tnrc18Q80WC3 2878 aa12,5□□□□□ -0,41
Ebf3-201ENSMUST00000033378 Snhg11Q4G0K9 87 aa12,49□□□□□ -0,41
Ebf3-201ENSMUST00000033378 Gm16181B0V2H2 73 aa12,49□□□□□ -0,41
Ebf3-201ENSMUST00000033378 Igkv8-19A0A0G2JFN8 121 aa12,48□□□□□ -0,41
Ebf3-201ENSMUST00000033378 Ankrd17Q99NH0 2603 aaKnown RBP12,48□□□□□ -0,41
Ebf3-201ENSMUST00000033378 Igkv3-7A0A0G2JE31 119 aa12,47□□□□□ -0,41
Ebf3-201ENSMUST00000033378 Ankrd11E9Q4F7 2643 aa12,45□□□□□ -0,42
Ebf3-201ENSMUST00000033378 Gm7173A0A0G2JEB6 3132 aa12,45□□□□□ -0,42
Ebf3-201ENSMUST00000033378 Gm5617Q91VN2 117 aa12,44□□□□□ -0,42
Ebf3-201ENSMUST00000033378 Map1aQ9QYR6 2776 aa12,44□□□□□ -0,42
Ebf3-201ENSMUST00000033378 Defb39Q70KL3 74 aa12,43□□□□□ -0,42
Ebf3-201ENSMUST00000033378 Igkv8-28A0A0G2JE47 121 aa12,43□□□□□ -0,42
Ebf3-201ENSMUST00000033378 Lypd5Q9D7Z7 256 aa12,41□□□□□ -0,42
Ebf3-201ENSMUST00000033378 AY074887Q8R5F9 132 aa12,41□□□□□ -0,42
Ebf3-201ENSMUST00000033378 Krtap11-1E9Q2E9 183 aa12,4□□□□□ -0,42
Ebf3-201ENSMUST00000033378 FlnbQ80X90 2602 aaKnown RBP12,39□□□□□ -0,43
Ebf3-201ENSMUST00000033378 Cdc42se1Q8BHL7 80 aa12,39□□□□□ -0,43
Ebf3-201ENSMUST00000033378 Chd7A2AJK6 2986 aaKnown RBP12,38□□□□□ -0,43
Ebf3-201ENSMUST00000033378 Rpl37aP61514 92 aa12,38□□□□□ -0,43
Ebf3-201ENSMUST00000033378 Gm10642Q3TWM1 71 aa12,38□□□□□ -0,43
Ebf3-201ENSMUST00000033378 Ly6g6cQ9Z1Q4 126 aa12,37□□□□□ -0,43
Ebf3-201ENSMUST00000033378 Usp24B1AY13 2617 aaKnown RBP12,36□□□□□ -0,43
Ebf3-201ENSMUST00000033378 FasnP19096 2504 aaKnown RBP12,36□□□□□ -0,43
Ebf3-201ENSMUST00000033378 Usp34Q6ZQ93 3582 aa12,36□□□□□ -0,43
Ebf3-201ENSMUST00000033378 Sprr1bQ62267 153 aa12,35□□□□□ -0,43
Ebf3-201ENSMUST00000033378 Defb10Q8R2I8 73 aa12,35□□□□□ -0,43
Ebf3-201ENSMUST00000033378 Q8BT88 171 aa12,34□□□□□ -0,43
Ebf3-201ENSMUST00000033378 Coa5Q99M07 74 aa12,34□□□□□ -0,43
Ebf3-201ENSMUST00000033378 Col12a1Q60847 3120 aa12,33□□□□□ -0,44
Ebf3-201ENSMUST00000033378 AI606181Q8C7B9 129 aa12,33□□□□□ -0,44
Ebf3-201ENSMUST00000033378 Sprr4Q8CGN8 76 aa12,33□□□□□ -0,44
Ebf3-201ENSMUST00000033378 Prol1E9PYQ4 312 aa12,32□□□□□ -0,44
Ebf3-201ENSMUST00000033378 C530025M09RikF6RGA8 229 aa12,32□□□□□ -0,44
Ebf3-201ENSMUST00000033378 Notch1Q01705 2531 aa12,32□□□□□ -0,44
Ebf3-201ENSMUST00000033378 Fam168bQ80XQ8 194 aa12,31□□□□□ -0,44
Ebf3-201ENSMUST00000033378 Phf5aP83870 110 aaKnown RBP12,31□□□□□ -0,44
Ebf3-201ENSMUST00000033378 A330070K13RikQ8CA53 115 aa12,3□□□□□ -0,44
Ebf3-201ENSMUST00000033378 Fn1P11276 2477 aaKnown RBP12,3□□□□□ -0,44
Ebf3-201ENSMUST00000033378 Bod1lE9Q6J5 3032 aa12,29□□□□□ -0,44
Ebf3-201ENSMUST00000033378 FlnaQ8BTM8 2647 aaKnown RBP12,28□□□□□ -0,44
Ebf3-201ENSMUST00000033378 Fam229bQ8CF36 80 aa12,26□□□□□ -0,45
Ebf3-201ENSMUST00000033378 Limd2Q8BGB5 128 aa12,26□□□□□ -0,45
Ebf3-201ENSMUST00000033378 HrnrQ8VHD8 2496 aa12,25□□□□□ -0,45
Ebf3-201ENSMUST00000033378 Gm20661K7N787 53 aa12,25□□□□□ -0,45
Ebf3-201ENSMUST00000033378 AtrQ9JKK8 2635 aa12,25□□□□□ -0,45
Ebf3-201ENSMUST00000033378 Gm28374F6SG70 93 aa12,25□□□□□ -0,45
Ebf3-201ENSMUST00000033378 Ranbp2Q9ERU9 3053 aaKnown RBP12,23□□□□□ -0,45
Ebf3-201ENSMUST00000033378 Gm10837Q3UTT8 145 aa12,23□□□□□ -0,45
Ebf3-201ENSMUST00000033378 Ash1lQ99MY8 2958 aa12,23□□□□□ -0,45
Ebf3-201ENSMUST00000033378 Dmbt1Q60997 2085 aa12,22□□□□□ -0,45
Ebf3-201ENSMUST00000033378 Gm10999F6Q4M4 69 aa12,22□□□□□ -0,45
Ebf3-201ENSMUST00000033378 Itpr1P11881 2749 aa12,2□□□□□ -0,46
Ebf3-201ENSMUST00000033378 A930002H24RikQ8C8Y3 163 aa12,18□□□□□ -0,46
Ebf3-201ENSMUST00000033378 Phxr4P15974 95 aa12,18□□□□□ -0,46
Ebf3-201ENSMUST00000033378 HttP42859 3119 aa12,17□□□□□ -0,46
Ebf3-201ENSMUST00000033378 AplnQ9R0R4 77 aa12,16□□□□□ -0,46
Ebf3-201ENSMUST00000033378 Gm7276Q3TYW4 209 aa12,15□□□□□ -0,46
Ebf3-201ENSMUST00000033378 Znf414Q9DCK4 299 aa12,15□□□□□ -0,46
Ebf3-201ENSMUST00000033378 Nsd1O88491 2588 aaKnown RBP12,15□□□□□ -0,46
Ebf3-201ENSMUST00000033378 CnbpP53996 178 aaKnown RBP12,14□□□□□ -0,47
Ebf3-201ENSMUST00000033378 Kmt2bO08550 2713 aa12,13□□□□□ -0,47
Ebf3-201ENSMUST00000033378 Lelp1Q9DAE3 120 aa12,12□□□□□ -0,47
Ebf3-201ENSMUST00000033378 NipblQ6KCD5 2798 aaKnown RBP12,11□□□□□ -0,47
Ebf3-201ENSMUST00000033378 Fbn2Q61555 2907 aa12,11□□□□□ -0,47
Ebf3-201ENSMUST00000033378 Gm11213A0A1B0GR83 88 aa12,11□□□□□ -0,47
Ebf3-201ENSMUST00000033378 Gm27235Q3UW50 83 aa12,11□□□□□ -0,47
Ebf3-201ENSMUST00000033378 Gm9195A0A140LHT4 2805 aa12,09□□□□□ -0,47
Ebf3-201ENSMUST00000033378 Dmxl1Q6PNC0 3013 aa12,09□□□□□ -0,47
Ebf3-201ENSMUST00000033378 Spaca4Q80ZQ0 127 aa12,08□□□□□ -0,47
Ebf3-201ENSMUST00000033378 Hectd1Q69ZR2 2618 aaKnown RBP12,08□□□□□ -0,48
Ebf3-201ENSMUST00000033378 Gpr15lA0A0B4J1N3 78 aa12,06□□□□□ -0,48
Ebf3-201ENSMUST00000033378 Akap13E9Q394 2776 aa12,05□□□□□ -0,48
Ebf3-201ENSMUST00000033378 Vps13aQ5H8C4 3166 aa12,04□□□□□ -0,48
Ebf3-201ENSMUST00000033378 Defb1P56386 69 aa12,04□□□□□ -0,48
Ebf3-201ENSMUST00000033378 Gm3233E9Q2H5 230 aa12,03□□□□□ -0,48
Ebf3-201ENSMUST00000033378 Rev3lQ61493 3122 aa12,01□□□□□ -0,49
Ebf3-201ENSMUST00000033378 Gm10320E9PW43 113 aa12,01□□□□□ -0,49
Ebf3-201ENSMUST00000033378 Q8BGJ3 129 aa12□□□□□ -0,49
Ebf3-201ENSMUST00000033378 Chtf8P0CG14 533 aa12□□□□□ -0,49
Ebf3-201ENSMUST00000033378 Cystm1Q8K353 104 aa12□□□□□ -0,49
Ebf3-201ENSMUST00000033378 4930507D05RikQ8C9C9 103 aa11,97□□□□□ -0,49
Ebf3-201ENSMUST00000033378 Smim29Q8R043 75 aa11,97□□□□□ -0,49
Ebf3-201ENSMUST00000033378 Cdh23Q99PF4 3354 aa11,96□□□□□ -0,49
Ebf3-201ENSMUST00000033378 Frem2Q6NVD0 3160 aa11,95□□□□□ -0,5
Ebf3-201ENSMUST00000033378 Gm17606F6ZL36 78 aa11,94□□□□□ -0,5
Ebf3-201ENSMUST00000033378 AtmQ62388 3066 aa11,94□□□□□ -0,5
Ebf3-201ENSMUST00000033378 Stab1Q8R4Y4 2571 aa11,93□□□□□ -0,5
Ebf3-201ENSMUST00000033378 Gm12216A0A1W2P827 62 aa11,92□□□□□ -0,5
Ebf3-201ENSMUST00000033378 KalrnA2CG49 2964 aa11,9□□□□□ -0,51
Ebf3-201ENSMUST00000033378 Gm10643Q3URG9 111 aa11,89□□□□□ -0,51
Ebf3-201ENSMUST00000033378 Myo15bI7HPW8 3033 aa11,89□□□□□ -0,51
Ebf3-201ENSMUST00000033378 Uqcr11Q9CPX8 56 aa11,88□□□□□ -0,51
Ebf3-201ENSMUST00000033378 Chd6A3KFM7 2711 aa11,87□□□□□ -0,51
Ebf3-201ENSMUST00000033378 Defb9Q8R2I6 67 aa11,86□□□□□ -0,51
Retrieved 100 of 22,080 RNA–protein pairs in 5,8 ms