RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Rhox8Q6VSS7 320 aa32.62■■■□□ 2.81
Ebf3-201ENSMUST00000033378 Rpgrip1Q9EPQ2 1331 aa30.53■■■□□ 2.48
Ebf3-201ENSMUST00000033378 Ehmt2Q9Z148 1263 aaKnown RBP30.01■■■□□ 2.4
Ebf3-201ENSMUST00000033378 Ccdc136Q3TVA9 1136 aa29.19■■■□□ 2.26
Ebf3-201ENSMUST00000033378 Las1lA2BE28 776 aaKnown RBP29.04■■■□□ 2.24
Ebf3-201ENSMUST00000033378 NischQ80TM9 1593 aa28.83■■■□□ 2.2
Ebf3-201ENSMUST00000033378 Zeb1Q64318 1117 aa28.78■■■□□ 2.2
Ebf3-201ENSMUST00000033378 Wdr66E9Q743 1299 aa28.75■■■□□ 2.19
Ebf3-201ENSMUST00000033378 Cngb1E1AZ71 1325 aa28.69■■■□□ 2.18
Ebf3-201ENSMUST00000033378 Acin1Q9JIX8 1338 aaKnown RBP28.62■■■□□ 2.17
Ebf3-201ENSMUST00000033378 Gab3Q8BSM5 595 aa28.57■■■□□ 2.16
Ebf3-201ENSMUST00000033378 Trim41Q5NCC3 630 aa28.55■■■□□ 2.16
Ebf3-201ENSMUST00000033378 Esf1Q3V1V3 845 aaKnown RBP28.38■■■□□ 2.13
Ebf3-201ENSMUST00000033378 NefmP08553 848 aa27.91■■■□□ 2.06
Ebf3-201ENSMUST00000033378 Pcgf6Q99NA9 353 aa27.9■■■□□ 2.06
Ebf3-201ENSMUST00000033378 Myt1lP97500 1187 aa27.87■■■□□ 2.05
Ebf3-201ENSMUST00000033378 Pelp1Q9DBD5 1123 aaKnown RBP27.86■■■□□ 2.05
Ebf3-201ENSMUST00000033378 Npm2Q80W85 207 aa27.85■■■□□ 2.05
Ebf3-201ENSMUST00000033378 Ube2uB1AUC4 352 aa27.83■■■□□ 2.05
Ebf3-201ENSMUST00000033378 HrcG5E8J6 738 aa27.8■■■□□ 2.04
Ebf3-201ENSMUST00000033378 Ccdc180J3QNE4 1664 aa27.79■■■□□ 2.04
Ebf3-201ENSMUST00000033378 CenpbP27790 599 aa27.78■■■□□ 2.04
Ebf3-201ENSMUST00000033378 UbtfP25976 765 aaKnown RBP27.68■■■□□ 2.02
Ebf3-201ENSMUST00000033378 Cdk11bP24788 784 aaKnown RBP27.34■■□□□ 1.97
Ebf3-201ENSMUST00000033378 Supt5hO55201 1082 aaKnown RBP27.33■■□□□ 1.97
Ebf3-201ENSMUST00000033378 Rtl1Q7M732 1744 aa27.31■■□□□ 1.96
Ebf3-201ENSMUST00000033378 Stra8P70278 393 aa27.15■■□□□ 1.94
Ebf3-201ENSMUST00000033378 Slc24a1Q91WD8 1130 aa27.1■■□□□ 1.93
Ebf3-201ENSMUST00000033378 Nop58Q6DFW4 536 aaKnown RBP27.08■■□□□ 1.93
Ebf3-201ENSMUST00000033378 Ppargc1bQ8VHJ7 1014 aa27.01■■□□□ 1.92
Ebf3-201ENSMUST00000033378 Abcc9P70170 1546 aa26.94■■□□□ 1.9
Ebf3-201ENSMUST00000033378 Amer1Q7TS75 1132 aa26.9■■□□□ 1.9
Ebf3-201ENSMUST00000033378 Myt1Q8CFC2 1127 aa26.89■■□□□ 1.9
Ebf3-201ENSMUST00000033378 Mier1Q5UAK0 511 aa26.78■■□□□ 1.88
Ebf3-201ENSMUST00000033378 Zcchc6Q5BLK4 1491 aaKnown RBP26.73■■□□□ 1.87
Ebf3-201ENSMUST00000033378 Tnnt3Q9QZ47 272 aa26.73■■□□□ 1.87
Ebf3-201ENSMUST00000033378 Il27Q8K3I6 234 aa26.67■■□□□ 1.86
Ebf3-201ENSMUST00000033378 TonslQ6NZL6 1363 aa26.62■■□□□ 1.85
Ebf3-201ENSMUST00000033378 NclP09405 707 aaKnown RBP26.59■■□□□ 1.85
Ebf3-201ENSMUST00000033378 Fam50aQ9WV03 339 aaKnown RBP26.58■■□□□ 1.85
Ebf3-201ENSMUST00000033378 Ap3b1Q9Z1T1 1105 aa26.56■■□□□ 1.84
Ebf3-201ENSMUST00000033378 Ttbk1Q6PCN3 1308 aa26.54■■□□□ 1.84
Ebf3-201ENSMUST00000033378 Neurod1Q60867 357 aa26.54■■□□□ 1.84
Ebf3-201ENSMUST00000033378 NrdcQ8BHG1 1161 aa26.42■■□□□ 1.82
Ebf3-201ENSMUST00000033378 Eif5bQ05D44 1216 aaKnown RBP26.39■■□□□ 1.81
Ebf3-201ENSMUST00000033378 ClspnQ80YR7 1315 aa26.33■■□□□ 1.81
Ebf3-201ENSMUST00000033378 Sall2Q9QX96 1004 aa26.3■■□□□ 1.8
Ebf3-201ENSMUST00000033378 Abcc8B2RUS7 1588 aa26.28■■□□□ 1.8
Ebf3-201ENSMUST00000033378 Dcaf1Q80TR8 1506 aa26.24■■□□□ 1.79
Ebf3-201ENSMUST00000033378 4933416C03RikQ3V063 378 aa26.2■■□□□ 1.78
Ebf3-201ENSMUST00000033378 Anks4bQ8K3X6 423 aa26.14■■□□□ 1.78
Ebf3-201ENSMUST00000033378 Csrnp3P59055 597 aa26.13■■□□□ 1.77
Ebf3-201ENSMUST00000033378 Plekhg3Q4VAC9 1341 aa26.12■■□□□ 1.77
Ebf3-201ENSMUST00000033378 Anp32bQ9EST5 272 aaKnown RBP26.11■■□□□ 1.77
Ebf3-201ENSMUST00000033378 Gm38655A0A286YDK6 273 aa26.08■■□□□ 1.77
Ebf3-201ENSMUST00000033378 Gm35339A0A140LHH9 1649 aa26.08■■□□□ 1.76
Ebf3-201ENSMUST00000033378 NeflP08551 543 aa26.07■■□□□ 1.76
Ebf3-201ENSMUST00000033378 Rtl5Q5DTT4 599 aa26.02■■□□□ 1.76
Ebf3-201ENSMUST00000033378 Chic1Q8CBW7 227 aa25.95■■□□□ 1.74
Ebf3-201ENSMUST00000033378 Anp32aO35381 247 aa25.94■■□□□ 1.74
Ebf3-201ENSMUST00000033378 Mapk8ip2Q9ERE9 830 aa25.94■■□□□ 1.74
Ebf3-201ENSMUST00000033378 Cep164Q5DU05 1446 aa25.92■■□□□ 1.74
Ebf3-201ENSMUST00000033378 Eid3Q3V124 375 aa25.9■■□□□ 1.74
Ebf3-201ENSMUST00000033378 DiexfQ8BTT6 772 aaKnown RBP25.9■■□□□ 1.74
Ebf3-201ENSMUST00000033378 Lmod2Q3UHZ5 550 aa25.87■■□□□ 1.73
Ebf3-201ENSMUST00000033378 Aplp2Q06335 707 aa25.85■■□□□ 1.73
Ebf3-201ENSMUST00000033378 Os9Q8K2C7 672 aa25.65■■□□□ 1.7
Ebf3-201ENSMUST00000033378 Clip1Q922J3 1391 aa25.63■■□□□ 1.69
Ebf3-201ENSMUST00000033378 1700123L14RikQ3V2K7 440 aa25.56■■□□□ 1.68
Ebf3-201ENSMUST00000033378 Brd4Q9ESU6 1400 aaKnown RBP25.55■■□□□ 1.68
Ebf3-201ENSMUST00000033378 DaxxO35613 739 aa25.49■■□□□ 1.67
Ebf3-201ENSMUST00000033378 4930567H17RikQ3V0K5 233 aa25.49■■□□□ 1.67
Ebf3-201ENSMUST00000033378 Aebp2Q9Z248 504 aaKnown RBP25.44■■□□□ 1.66
Ebf3-201ENSMUST00000033378 Npm1Q61937 292 aaKnown RBP25.43■■□□□ 1.66
Ebf3-201ENSMUST00000033378 Zbtb7cQ8VCZ7 619 aa25.43■■□□□ 1.66
Ebf3-201ENSMUST00000033378 Calr4Q3TQS0 420 aa25.43■■□□□ 1.66
Ebf3-201ENSMUST00000033378 Rb1cc1Q9ESK9 1588 aa25.35■■□□□ 1.65
Ebf3-201ENSMUST00000033378 Zbtb4Q5F293 982 aa25.34■■□□□ 1.65
Ebf3-201ENSMUST00000033378 Ppp4r2Q0VGB7 417 aa25.34■■□□□ 1.65
Ebf3-201ENSMUST00000033378 Ccer2J3QPU5 274 aa25.25■■□□□ 1.63
Ebf3-201ENSMUST00000033378 Hnrnpul2Q00PI9 745 aaKnown RBP25.21■■□□□ 1.63
Ebf3-201ENSMUST00000033378 Wdr43Q6ZQL4 677 aaKnown RBP25.16■■□□□ 1.62
Ebf3-201ENSMUST00000033378 Mrs2Q5NCE8 434 aa25.14■■□□□ 1.61
Ebf3-201ENSMUST00000033378 Fam71e1A1L3C1 212 aa25.13■■□□□ 1.61
Ebf3-201ENSMUST00000033378 Chic2Q9D9G3 165 aa25.02■■□□□ 1.6
Ebf3-201ENSMUST00000033378 BlmO88700 1416 aa25.01■■□□□ 1.59
Ebf3-201ENSMUST00000033378 ArxO35085 564 aa25.01■■□□□ 1.59
Ebf3-201ENSMUST00000033378 Nlrp6Q91WS2 869 aa25.01■■□□□ 1.59
Ebf3-201ENSMUST00000033378 Prdm10Q3UTQ7 1184 aa24.98■■□□□ 1.59
Ebf3-201ENSMUST00000033378 Polr3glQ8R0C0 218 aa24.94■■□□□ 1.58
Ebf3-201ENSMUST00000033378 Erich6D3Z6S9 713 aa24.93■■□□□ 1.58
Ebf3-201ENSMUST00000033378 Rad21Q61550 635 aaKnown RBP24.88■■□□□ 1.57
Ebf3-201ENSMUST00000033378 Setd5Q5XJV7 1441 aa24.88■■□□□ 1.57
Ebf3-201ENSMUST00000033378 Golga3P55937 1487 aa24.87■■□□□ 1.57
Ebf3-201ENSMUST00000033378 Rsf1E9PWW9 1441 aaKnown RBP24.86■■□□□ 1.57
Ebf3-201ENSMUST00000033378 Upf2A2AT37 1269 aaKnown RBP24.85■■□□□ 1.57
Ebf3-201ENSMUST00000033378 SafbD3YXK2 937 aaKnown RBP24.82■■□□□ 1.56
Ebf3-201ENSMUST00000033378 P3h3Q8CG70 732 aa24.79■■□□□ 1.56
Ebf3-201ENSMUST00000033378 Baz1aO88379 1555 aa24.79■■□□□ 1.56
Ebf3-201ENSMUST00000033378 Fkbp15Q6P9Q6 1216 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms