RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Fam19a1Q7TPG8 133 aa9.96□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 Sprr4Q8CGN8 76 aa9.96□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 Gm2916Q9D9B9 127 aa9.96□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 AplnQ9R0R4 77 aa9.96□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 Inafm2A0A1L1STD6 152 aa9.96□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 Naa38Q9D2U5 125 aa9.96□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 Cd164Q9R0L9 197 aa9.96□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 Trav14-1A0A0G2JF94 121 aa9.95□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 ScxQ64124 207 aa9.95□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 Defb37Q7TMD2 62 aa9.94□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 BC048502Q80Y74 154 aa9.94□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 PtprqP0C5E4 2300 aa9.94□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 Elof1P60003 83 aa9.94□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 Ighv2-5A0A0A6YY69 116 aa9.92□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 Serp2Q6TAW2 65 aa9.92□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 Rbm3O89086 153 aaKnown RBP9.92□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 A730071L15RikQ8C4X0 137 aa9.91□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 Col6a5A6H584 2640 aa9.91□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 FlnbQ80X90 2602 aaKnown RBP9.9□□□□□ -0.82
Nkx3-1-201ENSMUST00000022646 Defa21Q8C1P2 93 aa9.89□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Smim29Q8R043 75 aa9.89□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Gm36176A0A1W2P8D5 158 aa9.89□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Gm16181B0V2H2 73 aa9.89□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Defa4P28311 92 aa9.89□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Fn1P11276 2477 aaKnown RBP9.89□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Scgb1b2O35176 93 aa9.89□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Tmem243B2RVB9 118 aa9.88□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 4930518I15RikQ3V2W7 57 aa9.88□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Nsd1O88491 2588 aaKnown RBP9.88□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Dnah3Q8BW94 4083 aa9.87□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Igkv1-122A0A140T8M9 119 aa9.87□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Fam229bQ8CF36 80 aa9.87□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Gm7137J3QMW1 236 aa9.87□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Pde6gP09174 87 aa9.87□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Gm5617Q91VN2 117 aa9.87□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 9530053A07RikE9PVG8 2581 aa9.87□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Gm17689B3GLJ4 109 aa9.86□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 6430550D23RikE9Q1X6 194 aa9.85□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Igkv8-28A0A0G2JE47 121 aa9.85□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Gm16485Q8C4B7 115 aa9.85□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 VwfQ8CIZ8 2813 aa9.85□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Gm7276Q3TYW4 209 aa9.84□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Pou2af1Q64693 256 aa9.84□□□□□ -0.83
Nkx3-1-201ENSMUST00000022646 Sslp1Q3UN54 99 aa9.83□□□□□ -0.84
Nkx3-1-201ENSMUST00000022646 SvipQ3UZP4 77 aa9.83□□□□□ -0.84
Nkx3-1-201ENSMUST00000022646 Defa23Q5G866 93 aa9.83□□□□□ -0.84
Nkx3-1-201ENSMUST00000022646 Igkv1-110A0A0B4J1I0 119 aa9.82□□□□□ -0.84
Nkx3-1-201ENSMUST00000022646 A830005F24RikQ8BRT5 167 aa9.81□□□□□ -0.84
Nkx3-1-201ENSMUST00000022646 Vpreb2P13373 142 aa9.81□□□□□ -0.84
Nkx3-1-201ENSMUST00000022646 Ighv2-2A0A075B5P8 116 aa9.8□□□□□ -0.84
Nkx3-1-201ENSMUST00000022646 P01821 116 aa9.8□□□□□ -0.84
Nkx3-1-201ENSMUST00000022646 A0A286YE02 88 aa9.79□□□□□ -0.84
Nkx3-1-201ENSMUST00000022646 Fam19a3Q7TPG6 132 aa9.79□□□□□ -0.84
Nkx3-1-201ENSMUST00000022646 Fam168bQ80XQ8 194 aa9.78□□□□□ -0.84
Nkx3-1-201ENSMUST00000022646 Dnah10D3YYQ8 4591 aa9.77□□□□□ -0.84
Nkx3-1-201ENSMUST00000022646 B230307C23RikQ8BLB2 64 aa9.77□□□□□ -0.85
Nkx3-1-201ENSMUST00000022646 Wfdc17Q5SSJ1 76 aa9.77□□□□□ -0.85
Nkx3-1-201ENSMUST00000022646 GhrhP16043 103 aa9.76□□□□□ -0.85
Nkx3-1-201ENSMUST00000022646 P84750 121 aa9.76□□□□□ -0.85
Nkx3-1-201ENSMUST00000022646 Sprr1aQ62266 144 aa9.76□□□□□ -0.85
Nkx3-1-201ENSMUST00000022646 Dmac1Q9CQ00 111 aa9.75□□□□□ -0.85
Nkx3-1-201ENSMUST00000022646 Gm11627A6PWP4 55 aa9.75□□□□□ -0.85
Nkx3-1-201ENSMUST00000022646 Tmem258P61166 79 aa9.75□□□□□ -0.85
Nkx3-1-201ENSMUST00000022646 Dnah7bL7N1Y0 4068 aa9.75□□□□□ -0.85
Nkx3-1-201ENSMUST00000022646 Sfta2E9PXB6 77 aa9.75□□□□□ -0.85
Nkx3-1-201ENSMUST00000022646 A330070K13RikQ8CA53 115 aa9.75□□□□□ -0.85
Nkx3-1-201ENSMUST00000022646 Ndufc1Q9CQY9 76 aa9.73□□□□□ -0.85
Nkx3-1-201ENSMUST00000022646 Wfdc6bF6ULY1 148 aa9.73□□□□□ -0.85
Nkx3-1-201ENSMUST00000022646 Igkv3-2A0A075B5P0 119 aa9.72□□□□□ -0.85
Nkx3-1-201ENSMUST00000022646 Obox2E9PXV9 151 aa9.71□□□□□ -0.85
Nkx3-1-201ENSMUST00000022646 Sprr2jO70561 109 aa9.71□□□□□ -0.85
Nkx3-1-201ENSMUST00000022646 Dnah14A0A140LIJ4 4489 aa9.71□□□□□ -0.85
Nkx3-1-201ENSMUST00000022646 BikO70337 150 aa9.71□□□□□ -0.86
Nkx3-1-201ENSMUST00000022646 Cox6a2P43023 97 aa9.71□□□□□ -0.86
Nkx3-1-201ENSMUST00000022646 Fam19a5Q91WE9 132 aa9.7□□□□□ -0.86
Nkx3-1-201ENSMUST00000022646 Gm19935A0A1B0GSF9 52 aa9.69□□□□□ -0.86
Nkx3-1-201ENSMUST00000022646 P06320 134 aa9.69□□□□□ -0.86
Nkx3-1-201ENSMUST00000022646 Dnah6E9Q0B6 4144 aa9.68□□□□□ -0.86
Nkx3-1-201ENSMUST00000022646 Gm37389A0A0A6YW05 95 aa9.67□□□□□ -0.86
Nkx3-1-201ENSMUST00000022646 Prol1E9PYQ4 312 aa9.67□□□□□ -0.86
Nkx3-1-201ENSMUST00000022646 Igkv3-12A0A140T8P0 119 aa9.67□□□□□ -0.86
Nkx3-1-201ENSMUST00000022646 A930002H24RikQ8C8Y3 163 aa9.67□□□□□ -0.86
Nkx3-1-201ENSMUST00000022646 Gm11011D3Z3L9 86 aa9.66□□□□□ -0.86
Nkx3-1-201ENSMUST00000022646 Rps28P62858 69 aaKnown RBP9.65□□□□□ -0.86
Nkx3-1-201ENSMUST00000022646 Vpreb1P13372 142 aa9.65□□□□□ -0.86
Nkx3-1-201ENSMUST00000022646 PscaP57096 123 aa9.65□□□□□ -0.86
Nkx3-1-201ENSMUST00000022646 Vpreb3D3Z6J4 130 aa9.63□□□□□ -0.87
Nkx3-1-201ENSMUST00000022646 C130032M10RikQ8C888 123 aa9.63□□□□□ -0.87
Nkx3-1-201ENSMUST00000022646 BaalcQ8VHV1 145 aa9.63□□□□□ -0.87
Nkx3-1-201ENSMUST00000022646 Dnah1E9Q8T7 4250 aa9.62□□□□□ -0.87
Nkx3-1-201ENSMUST00000022646 Ube2bP63147 152 aa9.62□□□□□ -0.87
Nkx3-1-201ENSMUST00000022646 Prr15lQ8JZM2 100 aa9.62□□□□□ -0.87
Nkx3-1-201ENSMUST00000022646 Gm10401E9Q3K6 71 aa9.62□□□□□ -0.87
Nkx3-1-201ENSMUST00000022646 TgO08710 2766 aa9.61□□□□□ -0.87
Nkx3-1-201ENSMUST00000022646 Dnah17Q69Z23 4481 aa9.61□□□□□ -0.87
Nkx3-1-201ENSMUST00000022646 Mrpl34Q99N91 92 aa9.6□□□□□ -0.87
Nkx3-1-201ENSMUST00000022646 Csmd3Q80T79 3707 aa9.59□□□□□ -0.87
Nkx3-1-201ENSMUST00000022646 Samd13D3YUG0 102 aa9.59□□□□□ -0.87
Nkx3-1-201ENSMUST00000022646 Gm17521F6QAC8 156 aa9.59□□□□□ -0.87
Nkx3-1-201ENSMUST00000022646 Defb40Q70KL2 73 aa9.59□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms