RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Gm43218A0A0G2JGT0 114 aa9.75□□□□□ -0.85
Pcdha1-202ENSMUST00000193839 PscaP57096 123 aa9.75□□□□□ -0.85
Pcdha1-202ENSMUST00000193839 Gm5153P01627 120 aa9.74□□□□□ -0.85
Pcdha1-202ENSMUST00000193839 Nupr2Q497P3 102 aa9.74□□□□□ -0.85
Pcdha1-202ENSMUST00000193839 Obox2E9PXV9 151 aa9.74□□□□□ -0.85
Pcdha1-202ENSMUST00000193839 Gm11011D3Z3L9 86 aa9.74□□□□□ -0.85
Pcdha1-202ENSMUST00000193839 Gpha2Q925Q5 128 aa9.74□□□□□ -0.85
Pcdha1-202ENSMUST00000193839 Odf3l2Q3TZ65 277 aa9.73□□□□□ -0.85
Pcdha1-202ENSMUST00000193839 Trav14-1A0A0G2JF94 121 aa9.72□□□□□ -0.85
Pcdha1-202ENSMUST00000193839 A0A286YE49 62 aa9.72□□□□□ -0.85
Pcdha1-202ENSMUST00000193839 Igkv4-92A0A0B4J1I2 117 aa9.72□□□□□ -0.85
Pcdha1-202ENSMUST00000193839 Ccdc179J3QM76 67 aa9.7□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 4930518I15RikQ3V2W7 57 aa9.7□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 SycnQ8VCK7 134 aa9.7□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 Wfdc10Q3V2J9 124 aa9.7□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 Spata3Q9D9T6 193 aa9.7□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 Krtap16-1A2A5X5 502 aa9.69□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 Igkv3-10A0A0G2JGN0 119 aa9.69□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 Chd7A2AJK6 2986 aaKnown RBP9.69□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 H2al1eQ810S6 105 aa9.69□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 A0A286YCN5 57 aa9.68□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 Ighv2-2A0A075B5P8 116 aa9.67□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 P01821 116 aa9.67□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 Wfdc12Q9JHY3 85 aa9.67□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 P01819 144 aa9.67□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 Gm9887F6RFI0 207 aa9.66□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 Usp34Q6ZQ93 3582 aa9.66□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 Gm16181B0V2H2 73 aa9.66□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 Lama3Q61789 3330 aa9.66□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 Prune2Q52KR3 3084 aa9.66□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 Ankrd11E9Q4F7 2643 aa9.65□□□□□ -0.86
Pcdha1-202ENSMUST00000193839 PolqQ8CGS6 2544 aa9.65□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 Igkv1-117A0A140T8M0 119 aa9.65□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 Prr13Q9CQJ5 137 aa9.64□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 Gm17509Q9CZ61 145 aa9.64□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 SnurfQ9WU12 71 aa9.64□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 CrygaP04345 174 aa9.63□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 Sec61gP60060 68 aa9.63□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 Ndufs5Q99LY9 106 aa9.63□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 Nbeal1E9PYP2 2688 aa9.63□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 Coa6Q8BGD8 79 aa9.63□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 H2al1kJ3QP08 105 aa9.61□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 Gm16485Q8C4B7 115 aa9.61□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 H2al1mQ9DAD9 105 aa9.61□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 Gm10570F6VB42 170 aa9.61□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 FlnbQ80X90 2602 aaKnown RBP9.61□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 Psors1c2Q80ZC9 134 aa9.61□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 Hectd1Q69ZR2 2618 aaKnown RBP9.6□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 Gm3250E9Q1M3 230 aa9.6□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 9230102O04RikA2ASX7 82 aa9.59□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 Defb13Q8R2I4 64 aa9.59□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 Igkv1-110A0A0B4J1I0 119 aa9.59□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 Defb40Q70KL2 73 aa9.59□□□□□ -0.87
Pcdha1-202ENSMUST00000193839 Gm7173A0A0G2JEB6 3132 aa9.58□□□□□ -0.88
Pcdha1-202ENSMUST00000193839 ScxQ64124 207 aa9.58□□□□□ -0.88
Pcdha1-202ENSMUST00000193839 Itpr1P11881 2749 aa9.58□□□□□ -0.88
Pcdha1-202ENSMUST00000193839 Igkv3-4A0A140T8Q4 119 aa9.58□□□□□ -0.88
Pcdha1-202ENSMUST00000193839 Sostdc1Q9CQN4 206 aa9.58□□□□□ -0.88
Pcdha1-202ENSMUST00000193839 Spint4Q9D263 159 aa9.58□□□□□ -0.88
Pcdha1-202ENSMUST00000193839 MobpQ9D2P8 170 aa9.57□□□□□ -0.88
Pcdha1-202ENSMUST00000193839 Ly6g6cQ9Z1Q4 126 aa9.57□□□□□ -0.88
Pcdha1-202ENSMUST00000193839 Gm9903Q8C9Y8 129 aa9.56□□□□□ -0.88
Pcdha1-202ENSMUST00000193839 AI854703Q8BIN3 203 aa9.56□□□□□ -0.88
Pcdha1-202ENSMUST00000193839 Znf706Q9D115 76 aaKnown RBP9.56□□□□□ -0.88
Pcdha1-202ENSMUST00000193839 Gm10308Q9CVR5 141 aa9.55□□□□□ -0.88
Pcdha1-202ENSMUST00000193839 Defb11Q8R2I7 77 aa9.55□□□□□ -0.88
Pcdha1-202ENSMUST00000193839 Cd164Q9R0L9 197 aa9.55□□□□□ -0.88
Pcdha1-202ENSMUST00000193839 Mki67E9PVX6 3177 aaKnown RBP9.54□□□□□ -0.88
Pcdha1-202ENSMUST00000193839 Col12a1Q60847 3120 aa9.53□□□□□ -0.88
Pcdha1-202ENSMUST00000193839 1700074P13RikQ9D9G7 251 aa9.53□□□□□ -0.88
Pcdha1-202ENSMUST00000193839 Cep192E9Q4Y4 2514 aaKnown RBP9.52□□□□□ -0.89
Pcdha1-202ENSMUST00000193839 Q9DAA7 145 aa9.52□□□□□ -0.89
Pcdha1-202ENSMUST00000193839 Igkv3-3A0A140T8Q0 119 aa9.5□□□□□ -0.89
Pcdha1-202ENSMUST00000193839 PtprqP0C5E4 2300 aa9.5□□□□□ -0.89
Pcdha1-202ENSMUST00000193839 Igkv8-21A0A140T8P7 120 aa9.5□□□□□ -0.89
Pcdha1-202ENSMUST00000193839 E130208F15RikQ3UPV3 143 aa9.5□□□□□ -0.89
Pcdha1-202ENSMUST00000193839 7530416G11RikJ3QJX6 159 aa9.49□□□□□ -0.89
Pcdha1-202ENSMUST00000193839 6430550D23RikE9Q1X6 194 aa9.48□□□□□ -0.89
Pcdha1-202ENSMUST00000193839 Gm10197F6QEY5 67 aa9.48□□□□□ -0.89
Pcdha1-202ENSMUST00000193839 Igkv8-27A0A0G2JF28 120 aa9.48□□□□□ -0.89
Pcdha1-202ENSMUST00000193839 Igkv8-30A0A140T8M3 121 aa9.48□□□□□ -0.89
Pcdha1-202ENSMUST00000193839 A530084C06RikQ3UTW2 186 aa9.47□□□□□ -0.89
Pcdha1-202ENSMUST00000193839 FlnaQ8BTM8 2647 aaKnown RBP9.47□□□□□ -0.89
Pcdha1-202ENSMUST00000193839 Rev3lQ61493 3122 aa9.46□□□□□ -0.89
Pcdha1-202ENSMUST00000193839 Lypd5Q9D7Z7 256 aa9.46□□□□□ -0.9
Pcdha1-202ENSMUST00000193839 Gm10772F7AIG4 85 aa9.46□□□□□ -0.9
Pcdha1-202ENSMUST00000193839 Cox6a2P43023 97 aa9.46□□□□□ -0.9
Pcdha1-202ENSMUST00000193839 Lelp1Q9DAE3 120 aa9.45□□□□□ -0.9
Pcdha1-202ENSMUST00000193839 Chchd10Q7TNL9 138 aa9.45□□□□□ -0.9
Pcdha1-202ENSMUST00000193839 P84750 121 aa9.44□□□□□ -0.9
Pcdha1-202ENSMUST00000193839 Elof1P60003 83 aa9.43□□□□□ -0.9
Pcdha1-202ENSMUST00000193839 Msrb1Q9JLC3 116 aa9.43□□□□□ -0.9
Pcdha1-202ENSMUST00000193839 Snhg11Q4G0K9 87 aa9.42□□□□□ -0.9
Pcdha1-202ENSMUST00000193839 CicQ924A2 2510 aa9.41□□□□□ -0.9
Pcdha1-202ENSMUST00000193839 Fam19a3Q7TPG6 132 aa9.41□□□□□ -0.9
Pcdha1-202ENSMUST00000193839 Igkv3-12A0A140T8P0 119 aa9.41□□□□□ -0.9
Pcdha1-202ENSMUST00000193839 Gm11627A6PWP4 55 aa9.41□□□□□ -0.9
Pcdha1-202ENSMUST00000193839 Mrpl34Q99N91 92 aa9.41□□□□□ -0.9
Pcdha1-202ENSMUST00000193839 A730009L09RikA0A1B0GS82 72 aa9.41□□□□□ -0.9
Pcdha1-202ENSMUST00000193839 2310034G01RikA0A286YDL3 209 aa9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 78.3 ms