RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 5730596B20RikQ8BQ08 205 aa7.39□□□□□ -1.23
Lig3-212ENSMUST00000173727 Timm17bQ9Z0V7 172 aa7.39□□□□□ -1.23
Lig3-212ENSMUST00000173727 Ighv1-62-1A0A075B5U3 116 aa7.38□□□□□ -1.23
Lig3-212ENSMUST00000173727 Trav13-4-dv7A0A075B6C2 110 aa7.38□□□□□ -1.23
Lig3-212ENSMUST00000173727 Tmem223Q9CQE2 199 aaKnown RBP7.38□□□□□ -1.23
Lig3-212ENSMUST00000173727 9430069I07RikQ9CX21 111 aa7.38□□□□□ -1.23
Lig3-212ENSMUST00000173727 Defa7P50705 93 aa7.38□□□□□ -1.23
Lig3-212ENSMUST00000173727 Igkv6-13A0A0G2JGY3 119 aa7.38□□□□□ -1.23
Lig3-212ENSMUST00000173727 Gm4707V9GXN5 68 aa7.38□□□□□ -1.23
Lig3-212ENSMUST00000173727 Smlr1J3QMJ4 66 aa7.37□□□□□ -1.23
Lig3-212ENSMUST00000173727 PemtQ61907 199 aa7.37□□□□□ -1.23
Lig3-212ENSMUST00000173727 1700010B08RikQ9DAI7 102 aa7.37□□□□□ -1.23
Lig3-212ENSMUST00000173727 Trav13d-4A0A0G2JFX3 110 aa7.37□□□□□ -1.23
Lig3-212ENSMUST00000173727 1700011M02RikB1AX35 88 aa7.37□□□□□ -1.23
Lig3-212ENSMUST00000173727 Trav11A0A0B4J1J9 114 aa7.36□□□□□ -1.23
Lig3-212ENSMUST00000173727 Prh1P05142 261 aa7.36□□□□□ -1.23
Lig3-212ENSMUST00000173727 Trav4-3A0A0B4J1K1 110 aa7.36□□□□□ -1.23
Lig3-212ENSMUST00000173727 Trav13-1A0A075B644 110 aa7.35□□□□□ -1.23
Lig3-212ENSMUST00000173727 MalO09198 153 aa7.35□□□□□ -1.23
Lig3-212ENSMUST00000173727 Bles03Q8VD62 251 aa7.35□□□□□ -1.23
Lig3-212ENSMUST00000173727 Csdc2Q91YQ3 154 aa7.35□□□□□ -1.23
Lig3-212ENSMUST00000173727 Igkv3-1A0A075B5P1 119 aa7.35□□□□□ -1.23
Lig3-212ENSMUST00000173727 Gm10647E9Q8X0 124 aa7.35□□□□□ -1.23
Lig3-212ENSMUST00000173727 Naa38Q9D2U5 125 aa7.35□□□□□ -1.23
Lig3-212ENSMUST00000173727 Defa21Q8C1P2 93 aa7.35□□□□□ -1.23
Lig3-212ENSMUST00000173727 Dnah3Q8BW94 4083 aa7.35□□□□□ -1.23
Lig3-212ENSMUST00000173727 Snhg11Q4G0K9 87 aa7.34□□□□□ -1.23
Lig3-212ENSMUST00000173727 B230359F08RikA0A0B4J1K3 109 aa7.34□□□□□ -1.23
Lig3-212ENSMUST00000173727 AplnQ9R0R4 77 aa7.34□□□□□ -1.23
Lig3-212ENSMUST00000173727 Ndufa12Q7TMF3 145 aaKnown RBP7.34□□□□□ -1.23
Lig3-212ENSMUST00000173727 Gm7102J3QQ10 178 aa7.33□□□□□ -1.24
Lig3-212ENSMUST00000173727 Dnal4Q9DCM4 105 aa7.33□□□□□ -1.24
Lig3-212ENSMUST00000173727 Zfand2aQ9JII7 171 aa7.33□□□□□ -1.24
Lig3-212ENSMUST00000173727 Hbb-b2P02089 147 aa7.32□□□□□ -1.24
Lig3-212ENSMUST00000173727 Reg3bP35230 175 aa7.32□□□□□ -1.24
Lig3-212ENSMUST00000173727 Xcl1P47993 114 aa7.32□□□□□ -1.24
Lig3-212ENSMUST00000173727 4930535I16RikQ9CUI2 172 aa7.32□□□□□ -1.24
Lig3-212ENSMUST00000173727 Trav9n-4A0A075B631 113 aa7.32□□□□□ -1.24
Lig3-212ENSMUST00000173727 Trav13n-2A0A0G2JF93 110 aa7.32□□□□□ -1.24
Lig3-212ENSMUST00000173727 Sprr1bQ62267 153 aa7.32□□□□□ -1.24
Lig3-212ENSMUST00000173727 4930518I15RikQ3V2W7 57 aa7.31□□□□□ -1.24
Lig3-212ENSMUST00000173727 4930524J08RikQ9CUJ5 163 aa7.31□□□□□ -1.24
Lig3-212ENSMUST00000173727 Ighv2-9-1A0A075B697 116 aa7.31□□□□□ -1.24
Lig3-212ENSMUST00000173727 Igkv1-117A0A140T8M0 119 aa7.31□□□□□ -1.24
Lig3-212ENSMUST00000173727 E130208F15RikQ3UPV3 143 aa7.31□□□□□ -1.24
Lig3-212ENSMUST00000173727 Gm17349F7BGH6 99 aa7.3□□□□□ -1.24
Lig3-212ENSMUST00000173727 7530416G11RikJ3QJX6 159 aa7.3□□□□□ -1.24
Lig3-212ENSMUST00000173727 Ighv1-61P01749 117 aa7.3□□□□□ -1.24
Lig3-212ENSMUST00000173727 P01755 137 aa7.29□□□□□ -1.24
Lig3-212ENSMUST00000173727 Hist1h4aP62806 103 aaKnown RBP7.29□□□□□ -1.24
Lig3-212ENSMUST00000173727 EnhoQ8K1D8 76 aa7.29□□□□□ -1.24
Lig3-212ENSMUST00000173727 Krtap11-1E9Q2E9 183 aa7.28□□□□□ -1.24
Lig3-212ENSMUST00000173727 Cystm1Q8K353 104 aa7.28□□□□□ -1.24
Lig3-212ENSMUST00000173727 FcgbpE9Q0B5 2583 aa7.28□□□□□ -1.24
Lig3-212ENSMUST00000173727 Smim26Q3V460 107 aa7.27□□□□□ -1.25
Lig3-212ENSMUST00000173727 Ighv13-2A0A0A6YWN3 119 aa7.27□□□□□ -1.25
Lig3-212ENSMUST00000173727 AW011738F6S7Q2 159 aa7.27□□□□□ -1.25
Lig3-212ENSMUST00000173727 Cops9Q3U898 57 aa7.27□□□□□ -1.25
Lig3-212ENSMUST00000173727 Defb50Q6TU36 73 aa7.27□□□□□ -1.25
Lig3-212ENSMUST00000173727 Lage3Q9CR70 148 aa7.27□□□□□ -1.25
Lig3-212ENSMUST00000173727 Dnah17Q69Z23 4481 aa7.26□□□□□ -1.25
Lig3-212ENSMUST00000173727 Tmem243B2RVB9 118 aa7.26□□□□□ -1.25
Lig3-212ENSMUST00000173727 Tmem86bQ497J1 226 aa7.26□□□□□ -1.25
Lig3-212ENSMUST00000173727 1810062G17RikG3X8Y2 129 aa7.26□□□□□ -1.25
Lig3-212ENSMUST00000173727 Gm16381A0A1Y7VKT9 73 aa7.25□□□□□ -1.25
Lig3-212ENSMUST00000173727 2010109I03RikQ9CQ11 111 aa7.25□□□□□ -1.25
Lig3-212ENSMUST00000173727 Gm10577Q3UDV9 132 aa7.25□□□□□ -1.25
Lig3-212ENSMUST00000173727 Defa23Q5G866 93 aa7.25□□□□□ -1.25
Lig3-212ENSMUST00000173727 Defb11Q8R2I7 77 aa7.25□□□□□ -1.25
Lig3-212ENSMUST00000173727 Gm11213A0A1B0GR83 88 aa7.24□□□□□ -1.25
Lig3-212ENSMUST00000173727 4930519P11RikQ9CUJ8 166 aa7.24□□□□□ -1.25
Lig3-212ENSMUST00000173727 Rpl28P41105 137 aaKnown RBP7.24□□□□□ -1.25
Lig3-212ENSMUST00000173727 Rpl18aP62717 176 aaKnown RBP7.23□□□□□ -1.25
Lig3-212ENSMUST00000173727 Igkv2-109A0A075B5K6 120 aa7.23□□□□□ -1.25
Lig3-212ENSMUST00000173727 MplkipQ9D011 178 aa7.23□□□□□ -1.25
Lig3-212ENSMUST00000173727 Igkv8-24A0A140T8P5 121 aa7.22□□□□□ -1.25
Lig3-212ENSMUST00000173727 Gm10549Q3URY4 149 aa7.22□□□□□ -1.25
Lig3-212ENSMUST00000173727 Pkd1l1Q8R526 2615 aa7.22□□□□□ -1.25
Lig3-212ENSMUST00000173727 Defa20Q45VN2 95 aa7.21□□□□□ -1.26
Lig3-212ENSMUST00000173727 Ighv1-56A0A0A6YXG2 117 aa7.21□□□□□ -1.26
Lig3-212ENSMUST00000173727 Gm9508A0A1W2P7W0 230 aa7.21□□□□□ -1.26
Lig3-212ENSMUST00000173727 Znf414Q9DCK4 299 aa7.21□□□□□ -1.26
Lig3-212ENSMUST00000173727 Rpl39lQ9CQD0 51 aa7.2□□□□□ -1.26
Lig3-212ENSMUST00000173727 Trav13-2A0A075B649 110 aa7.2□□□□□ -1.26
Lig3-212ENSMUST00000173727 Klk12B2RVZ0 247 aa7.2□□□□□ -1.26
Lig3-212ENSMUST00000173727 Fam19a1Q7TPG8 133 aa7.19□□□□□ -1.26
Lig3-212ENSMUST00000173727 Acyp1P56376 99 aa7.19□□□□□ -1.26
Lig3-212ENSMUST00000173727 Serp2Q6TAW2 65 aa7.19□□□□□ -1.26
Lig3-212ENSMUST00000173727 B230307C23RikQ8BLB2 64 aa7.19□□□□□ -1.26
Lig3-212ENSMUST00000173727 Gm16485Q8C4B7 115 aa7.18□□□□□ -1.26
Lig3-212ENSMUST00000173727 Huwe1Q7TMY8 4377 aaKnown RBP7.18□□□□□ -1.26
Lig3-212ENSMUST00000173727 Ifitm6A0A1B0GS75 124 aa7.18□□□□□ -1.26
Lig3-212ENSMUST00000173727 MifP34884 115 aaKnown RBP7.18□□□□□ -1.26
Lig3-212ENSMUST00000173727 Gm5142Q8C5X9 133 aa7.18□□□□□ -1.26
Lig3-212ENSMUST00000173727 C530025M09RikF6RGA8 229 aa7.17□□□□□ -1.26
Lig3-212ENSMUST00000173727 Brk1Q91VR8 75 aa7.17□□□□□ -1.26
Lig3-212ENSMUST00000173727 Dnah7bL7N1Y0 4068 aa7.17□□□□□ -1.26
Lig3-212ENSMUST00000173727 Stab2Q8R4U0 2559 aa7.17□□□□□ -1.26
Lig3-212ENSMUST00000173727 Samd13D3YUG0 102 aa7.16□□□□□ -1.26
Lig3-212ENSMUST00000173727 Cox7b2Q9D2H1 82 aa7.16□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 44.8 ms