RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 NischQ80TM9 1593 aa22.27■■□□□ 1.16
Lig3-212ENSMUST00000173727 Gm35339A0A140LHH9 1649 aa22.17■■□□□ 1.14
Lig3-212ENSMUST00000173727 Abcc9P70170 1546 aa21.6■■□□□ 1.05
Lig3-212ENSMUST00000173727 Abcc8B2RUS7 1588 aa21.29■■□□□ 1
Lig3-212ENSMUST00000173727 ScribQ80U72 1612 aa20.1■□□□□ 0.81
Lig3-212ENSMUST00000173727 Rhox8Q6VSS7 320 aa20.09■□□□□ 0.81
Lig3-212ENSMUST00000173727 Dcaf1Q80TR8 1506 aa19.78■□□□□ 0.76
Lig3-212ENSMUST00000173727 Kdm5dQ62240 1548 aa19.63■□□□□ 0.73
Lig3-212ENSMUST00000173727 NacadQ5SWP3 1504 aa19.57■□□□□ 0.72
Lig3-212ENSMUST00000173727 Rb1cc1Q9ESK9 1588 aa19.48■□□□□ 0.71
Lig3-212ENSMUST00000173727 Rtl1Q7M732 1744 aa19.35■□□□□ 0.69
Lig3-212ENSMUST00000173727 Ccdc180J3QNE4 1664 aa19.27■□□□□ 0.68
Lig3-212ENSMUST00000173727 Baz1aO88379 1555 aa19.24■□□□□ 0.67
Lig3-212ENSMUST00000173727 Sycp2Q9CUU3 1500 aa19.15■□□□□ 0.66
Lig3-212ENSMUST00000173727 Crybg2B7ZCC2 1516 aa19■□□□□ 0.63
Lig3-212ENSMUST00000173727 Zcchc6Q5BLK4 1491 aaKnown RBP18.9■□□□□ 0.62
Lig3-212ENSMUST00000173727 BicraF8VPZ9 1578 aa18.76■□□□□ 0.59
Lig3-212ENSMUST00000173727 Smarca2Q6DIC0 1577 aa18.74■□□□□ 0.59
Lig3-212ENSMUST00000173727 Ccdc136Q3TVA9 1136 aa18.67■□□□□ 0.58
Lig3-212ENSMUST00000173727 Cecr2E9Q2Z1 1453 aa18.41■□□□□ 0.54
Lig3-212ENSMUST00000173727 Trim41Q5NCC3 630 aa18.37■□□□□ 0.53
Lig3-212ENSMUST00000173727 Brd4Q9ESU6 1400 aaKnown RBP18.29■□□□□ 0.52
Lig3-212ENSMUST00000173727 Smarca4Q3TKT4 1613 aaKnown RBP18.22■□□□□ 0.51
Lig3-212ENSMUST00000173727 Synj1Q8CHC4 1574 aa18.17■□□□□ 0.5
Lig3-212ENSMUST00000173727 CftrP26361 1476 aa18.11■□□□□ 0.49
Lig3-212ENSMUST00000173727 Pds5bQ4VA53 1446 aaKnown RBP18.1■□□□□ 0.49
Lig3-212ENSMUST00000173727 Cttnbp2B9EJA2 1648 aa18.08■□□□□ 0.48
Lig3-212ENSMUST00000173727 Atad2bE9Q166 1460 aaKnown RBP18.08■□□□□ 0.48
Lig3-212ENSMUST00000173727 Iqgap2Q3UQ44 1575 aa18.03■□□□□ 0.48
Lig3-212ENSMUST00000173727 HrcG5E8J6 738 aa18.02■□□□□ 0.48
Lig3-212ENSMUST00000173727 Esf1Q3V1V3 845 aaKnown RBP17.96■□□□□ 0.47
Lig3-212ENSMUST00000173727 Cngb1E1AZ71 1325 aa17.93■□□□□ 0.46
Lig3-212ENSMUST00000173727 Golga3P55937 1487 aa17.91■□□□□ 0.46
Lig3-212ENSMUST00000173727 Ercc6F8VPZ5 1481 aa17.78■□□□□ 0.44
Lig3-212ENSMUST00000173727 Top2bQ64511 1612 aa17.77■□□□□ 0.43
Lig3-212ENSMUST00000173727 Wdr62Q3U3T8 1523 aa17.74■□□□□ 0.43
Lig3-212ENSMUST00000173727 Frmpd1A2AKB4 1549 aa17.73■□□□□ 0.43
Lig3-212ENSMUST00000173727 Cep164Q5DU05 1446 aa17.68■□□□□ 0.42
Lig3-212ENSMUST00000173727 Rsf1E9PWW9 1441 aaKnown RBP17.66■□□□□ 0.42
Lig3-212ENSMUST00000173727 Thoc2B1AZI6 1594 aaKnown RBP17.65■□□□□ 0.42
Lig3-212ENSMUST00000173727 Ccdc88bQ4QRL3 1481 aa17.63■□□□□ 0.41
Lig3-212ENSMUST00000173727 Chic1Q8CBW7 227 aa17.62■□□□□ 0.41
Lig3-212ENSMUST00000173727 Cc2d2aQ8CFW7 1633 aa17.62■□□□□ 0.41
Lig3-212ENSMUST00000173727 Fmn1Q05860 1466 aa17.55■□□□□ 0.4
Lig3-212ENSMUST00000173727 Unc13aQ4KUS2 1712 aa17.53■□□□□ 0.4
Lig3-212ENSMUST00000173727 Phldb1Q6PDH0 1371 aaKnown RBP17.47■□□□□ 0.39
Lig3-212ENSMUST00000173727 TnnQ80Z71 1560 aa17.41■□□□□ 0.38
Lig3-212ENSMUST00000173727 Fam135aQ6NS59 1506 aa17.41■□□□□ 0.38
Lig3-212ENSMUST00000173727 Lamc3Q9R0B6 1581 aa17.4■□□□□ 0.38
Lig3-212ENSMUST00000173727 Gab3Q8BSM5 595 aa17.4■□□□□ 0.38
Lig3-212ENSMUST00000173727 Kif15Q6P9L6 1387 aa17.39■□□□□ 0.37
Lig3-212ENSMUST00000173727 Top2aQ01320 1528 aaKnown RBP17.35■□□□□ 0.37
Lig3-212ENSMUST00000173727 Ubl4bQ9CQ84 188 aa17.34■□□□□ 0.37
Lig3-212ENSMUST00000173727 Rpgrip1Q9EPQ2 1331 aa17.27■□□□□ 0.35
Lig3-212ENSMUST00000173727 Dnajc5bQ9CQ94 199 aa17.24■□□□□ 0.35
Lig3-212ENSMUST00000173727 Il27Q8K3I6 234 aa17.21■□□□□ 0.35
Lig3-212ENSMUST00000173727 Cux2P70298 1426 aa17.2■□□□□ 0.34
Lig3-212ENSMUST00000173727 Camsap1A2AHC3 1581 aa17.2■□□□□ 0.34
Lig3-212ENSMUST00000173727 Ccdc18Q640L5 1455 aa17.19■□□□□ 0.34
Lig3-212ENSMUST00000173727 Baz1bQ9Z277 1479 aa17.16■□□□□ 0.34
Lig3-212ENSMUST00000173727 Rapgef2Q8CHG7 1496 aa17.14■□□□□ 0.33
Lig3-212ENSMUST00000173727 Ehmt2Q9Z148 1263 aaKnown RBP17.13■□□□□ 0.33
Lig3-212ENSMUST00000173727 Npm1Q61937 292 aaKnown RBP17.11■□□□□ 0.33
Lig3-212ENSMUST00000173727 Npm2Q80W85 207 aa17.09■□□□□ 0.33
Lig3-212ENSMUST00000173727 Mrc2Q64449 1479 aa17.04■□□□□ 0.32
Lig3-212ENSMUST00000173727 Grin2bQ01097 1482 aa17.03■□□□□ 0.32
Lig3-212ENSMUST00000173727 Cep162Q6ZQ06 1403 aa17.02■□□□□ 0.32
Lig3-212ENSMUST00000173727 NrkQ9R0G8 1455 aa17.02■□□□□ 0.31
Lig3-212ENSMUST00000173727 PtprkP35822 1457 aa16.99■□□□□ 0.31
Lig3-212ENSMUST00000173727 Shroom4Q1W617 1475 aa16.99■□□□□ 0.31
Lig3-212ENSMUST00000173727 LrpprcQ6PB66 1392 aaKnown RBP16.98■□□□□ 0.31
Lig3-212ENSMUST00000173727 Acin1Q9JIX8 1338 aaKnown RBP16.95■□□□□ 0.3
Lig3-212ENSMUST00000173727 Myt1lP97500 1187 aa16.94■□□□□ 0.3
Lig3-212ENSMUST00000173727 Eif4g1Q6NZJ6 1600 aaKnown RBP16.92■□□□□ 0.3
Lig3-212ENSMUST00000173727 PogzQ8BZH4 1409 aaKnown RBP16.92■□□□□ 0.3
Lig3-212ENSMUST00000173727 Kif21aQ9QXL2 1672 aa16.89■□□□□ 0.29
Lig3-212ENSMUST00000173727 Dhx29Q6PGC1 1365 aaKnown RBP16.89■□□□□ 0.29
Lig3-212ENSMUST00000173727 Efcab5A0JP43 1406 aa16.87■□□□□ 0.29
Lig3-212ENSMUST00000173727 Arhgap35Q91YM2 1499 aa16.87■□□□□ 0.29
Lig3-212ENSMUST00000173727 Duox2A2AQ99 1517 aa16.87■□□□□ 0.29
Lig3-212ENSMUST00000173727 Zeb1Q64318 1117 aa16.86■□□□□ 0.29
Lig3-212ENSMUST00000173727 Crocc2F6XLV1 1638 aa16.81■□□□□ 0.28
Lig3-212ENSMUST00000173727 Map3k1P53349 1493 aa16.81■□□□□ 0.28
Lig3-212ENSMUST00000173727 Mroh2bQ7M6Y6 1581 aa16.79■□□□□ 0.28
Lig3-212ENSMUST00000173727 Samd9lQ69Z37 1561 aa16.75■□□□□ 0.27
Lig3-212ENSMUST00000173727 Clip1Q922J3 1391 aa16.73■□□□□ 0.27
Lig3-212ENSMUST00000173727 AqrQ8CFQ3 1481 aaKnown RBP16.69■□□□□ 0.26
Lig3-212ENSMUST00000173727 Pcgf6Q99NA9 353 aa16.69■□□□□ 0.26
Lig3-212ENSMUST00000173727 SynmQ70IV5 1561 aa16.68■□□□□ 0.26
Lig3-212ENSMUST00000173727 Plb1Q3TTY0 1478 aa16.68■□□□□ 0.26
Lig3-212ENSMUST00000173727 Rad54l2Q99NG0 1466 aa16.65■□□□□ 0.26
Lig3-212ENSMUST00000173727 Urb2E9Q7L1 1524 aaKnown RBP16.65■□□□□ 0.26
Lig3-212ENSMUST00000173727 Carmil1Q6EDY6 1374 aa16.65■□□□□ 0.26
Lig3-212ENSMUST00000173727 Eea1Q8BL66 1411 aa16.64■□□□□ 0.25
Lig3-212ENSMUST00000173727 Lrriq1Q0P5X1 1673 aa16.62■□□□□ 0.25
Lig3-212ENSMUST00000173727 Setd5Q5XJV7 1441 aa16.6■□□□□ 0.25
Lig3-212ENSMUST00000173727 Ift140E9PY46 1464 aa16.56■□□□□ 0.24
Lig3-212ENSMUST00000173727 Disp1Q3TDN0 1521 aa16.56■□□□□ 0.24
Lig3-212ENSMUST00000173727 Ankrd26Q811D2 1581 aa16.55■□□□□ 0.24
Lig3-212ENSMUST00000173727 Magi3Q9EQJ9 1476 aa16.54■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 202.7 ms