RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Dmbt1Q60997 2085 aa5.25□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Defb50Q6TU36 73 aa5.25□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Notch3Q61982 2318 aa5.25□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Ptpn13Q64512 2453 aa5.25□□□□□ -1.57
Bdnf-204ENSMUST00000111044 E130218I03RikA0A0U1RNU5 63 aa5.24□□□□□ -1.57
Bdnf-204ENSMUST00000111044 2310034G01RikA0A286YDL3 209 aa5.24□□□□□ -1.57
Bdnf-204ENSMUST00000111044 A930002H24RikQ8C8Y3 163 aa5.24□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Ubr5Q80TP3 2792 aa5.24□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Trav13-2A0A075B649 110 aa5.24□□□□□ -1.57
Bdnf-204ENSMUST00000111044 9530003J23RikQ8BM26 151 aa5.24□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Gm9195A0A140LHT4 2805 aa5.24□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Cdc42se1Q8BHL7 80 aa5.24□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Higd2aQ9CQJ1 106 aa5.24□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Trav14-1A0A0G2JF94 121 aa5.23□□□□□ -1.57
Bdnf-204ENSMUST00000111044 A930009A15RikG3UYI6 118 aa5.23□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Reg3dQ9QUS9 175 aa5.23□□□□□ -1.57
Bdnf-204ENSMUST00000111044 A030005K14RikA0A1Y7VNY1 122 aa5.23□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Cox7a1P56392 80 aa5.23□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Defb26Q30KN7 186 aa5.23□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Abca12E9Q876 2595 aa5.23□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Igkv8-16A0A0G2JDG9 121 aa5.23□□□□□ -1.57
Bdnf-204ENSMUST00000111044 9230102O04RikA2ASX7 82 aa5.23□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Gm17689B3GLJ4 109 aa5.23□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Ankhd1E9PUR0 2548 aaKnown RBP5.22□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Sfta2E9PXB6 77 aa5.22□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Gm10197F6QEY5 67 aa5.22□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Gm10518F6UQQ9 182 aa5.22□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Gm9805F6YK59 57 aa5.22□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Nop10Q9CQS2 64 aa5.22□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Abca2P41234 2434 aa5.22□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Gm11011D3Z3L9 86 aa5.22□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Nbeal1E9PYP2 2688 aa5.21□□□□□ -1.57
Bdnf-204ENSMUST00000111044 Igkv4-58A0A0G2JGI6 119 aa5.21□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Cox7bP56393 80 aa5.21□□□□□ -1.58
Bdnf-204ENSMUST00000111044 AI606181Q8C7B9 129 aa5.21□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Prr15lQ8JZM2 100 aa5.21□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Ccdc179J3QM76 67 aa5.21□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Lelp1Q9DAE3 120 aa5.21□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Itpr3P70227 2670 aa5.21□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Igkv8-34A0A0G2JDU0 121 aa5.21□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Klk9Q32M27 251 aa5.21□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Coa6Q8BGD8 79 aa5.21□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Ufsp1Q9CZP0 217 aa5.21□□□□□ -1.58
Bdnf-204ENSMUST00000111044 MobpQ9D2P8 170 aa5.21□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Atox1O08997 68 aaKnown RBP5.2□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Bahcc1Q3UHR0 2643 aa5.19□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Igkv8-24A0A140T8P5 121 aa5.19□□□□□ -1.58
Bdnf-204ENSMUST00000111044 BC048502Q80Y74 154 aa5.19□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Chchd7Q8K2Q5 85 aa5.19□□□□□ -1.58
Bdnf-204ENSMUST00000111044 PlaurP35456 327 aa5.18□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Rif1Q6PR54 2419 aaKnown RBP5.18□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Gm7075D3Z497 112 aa5.18□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Usp9xP70398 2559 aaKnown RBP5.18□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Igkv4-61A0A0G2JH00 117 aa5.18□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Tcl1b5P56845 121 aa5.18□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Defb12Q8K4N3 78 aa5.18□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Igkv3-10A0A0G2JGN0 119 aa5.17□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Cdk2ap2Q9CPY4 127 aa5.17□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Gm37988J3QM41 62 aa5.17□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Q8BT88 171 aa5.17□□□□□ -1.58
Bdnf-204ENSMUST00000111044 2010109I03RikQ9CQ11 111 aa5.17□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Utp20Q5XG71 2788 aaKnown RBP5.17□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Csmd2V9GX34 3611 aa5.16□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Kmt2bO08550 2713 aa5.16□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Ube2bP63147 152 aa5.16□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Igkv4-54A0A0G2JES9 117 aa5.15□□□□□ -1.58
Bdnf-204ENSMUST00000111044 Gm10772F7AIG4 85 aa5.15□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Hectd1Q69ZR2 2618 aaKnown RBP5.15□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Defb42Q8BVB5 75 aa5.15□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Wnk1P83741 2377 aa5.15□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Gm7257D3YX25 99 aa5.14□□□□□ -1.59
Bdnf-204ENSMUST00000111044 FlncQ8VHX6 2726 aaKnown RBP5.14□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Igkv3-9A0A140T8P4 119 aa5.14□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Sprr2jO70561 109 aa5.14□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Igkv4-72A0A0B4J1I4 117 aa5.14□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Gm43218A0A0G2JGT0 114 aa5.14□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Msrb1Q9JLC3 116 aa5.14□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Spink4O35679 86 aa5.13□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Defb18Q30KP5 85 aa5.13□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Muc4Q8JZM8 3443 aa5.13□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Wfdc12Q9JHY3 85 aa5.13□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Ube2aQ9Z255 152 aa5.13□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Prh1P05142 261 aa5.12□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Muc2Q80Z19 2680 aa5.12□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Gm3443F7CCV5 94 aa5.12□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Gm10643Q3URG9 111 aa5.12□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Sprr1bQ62267 153 aa5.12□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Gcn1E9PVA8 2671 aaKnown RBP5.11□□□□□ -1.59
Bdnf-204ENSMUST00000111044 PrlhG3UWC3 86 aa5.11□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Usp24B1AY13 2617 aaKnown RBP5.11□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Ankrd11E9Q4F7 2643 aa5.11□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Nav3Q80TN7 2359 aa5.11□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Igkv8-28A0A0G2JE47 121 aa5.11□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Igkv1-122A0A140T8M9 119 aa5.11□□□□□ -1.59
Bdnf-204ENSMUST00000111044 A0A286YE02 88 aa5.11□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Gm10320E9PW43 113 aa5.11□□□□□ -1.59
Bdnf-204ENSMUST00000111044 6430550D23RikE9Q1X6 194 aa5.11□□□□□ -1.59
Bdnf-204ENSMUST00000111044 C530025M09RikF6RGA8 229 aa5.11□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Gm5617Q91VN2 117 aa5.11□□□□□ -1.59
Bdnf-204ENSMUST00000111044 Gm9913Q8BQQ2 135 aa5.11□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms