RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Rpgrip1Q9EPQ2 1331 aa13.06□□□□□ -0.32
Bdnf-204ENSMUST00000111044 NischQ80TM9 1593 aa12.98□□□□□ -0.33
Bdnf-204ENSMUST00000111044 Gm35339A0A140LHH9 1649 aa12.56□□□□□ -0.4
Bdnf-204ENSMUST00000111044 Abcc9P70170 1546 aa12.53□□□□□ -0.4
Bdnf-204ENSMUST00000111044 Acin1Q9JIX8 1338 aaKnown RBP12.38□□□□□ -0.43
Bdnf-204ENSMUST00000111044 Rtl1Q7M732 1744 aa12.37□□□□□ -0.43
Bdnf-204ENSMUST00000111044 Rhox8Q6VSS7 320 aa12.31□□□□□ -0.44
Bdnf-204ENSMUST00000111044 Abcc8B2RUS7 1588 aa12.3□□□□□ -0.44
Bdnf-204ENSMUST00000111044 Ccdc180J3QNE4 1664 aa12.29□□□□□ -0.44
Bdnf-204ENSMUST00000111044 Pcgf6Q99NA9 353 aa12.19□□□□□ -0.46
Bdnf-204ENSMUST00000111044 Las1lA2BE28 776 aaKnown RBP12.1□□□□□ -0.47
Bdnf-204ENSMUST00000111044 Ehmt2Q9Z148 1263 aaKnown RBP11.95□□□□□ -0.5
Bdnf-204ENSMUST00000111044 Myt1Q8CFC2 1127 aa11.87□□□□□ -0.51
Bdnf-204ENSMUST00000111044 Dcaf1Q80TR8 1506 aa11.78□□□□□ -0.52
Bdnf-204ENSMUST00000111044 Supt5hO55201 1082 aaKnown RBP11.76□□□□□ -0.53
Bdnf-204ENSMUST00000111044 CenpbP27790 599 aa11.74□□□□□ -0.53
Bdnf-204ENSMUST00000111044 Zcchc6Q5BLK4 1491 aaKnown RBP11.74□□□□□ -0.53
Bdnf-204ENSMUST00000111044 Neurod1Q60867 357 aa11.74□□□□□ -0.53
Bdnf-204ENSMUST00000111044 Trim41Q5NCC3 630 aa11.67□□□□□ -0.54
Bdnf-204ENSMUST00000111044 HrcG5E8J6 738 aa11.65□□□□□ -0.54
Bdnf-204ENSMUST00000111044 Cngb1E1AZ71 1325 aa11.59□□□□□ -0.55
Bdnf-204ENSMUST00000111044 DiexfQ8BTT6 772 aaKnown RBP11.52□□□□□ -0.57
Bdnf-204ENSMUST00000111044 1700123L14RikQ3V2K7 440 aa11.5□□□□□ -0.57
Bdnf-204ENSMUST00000111044 Zeb1Q64318 1117 aa11.49□□□□□ -0.57
Bdnf-204ENSMUST00000111044 Anks4bQ8K3X6 423 aa11.47□□□□□ -0.57
Bdnf-204ENSMUST00000111044 ScribQ80U72 1612 aa11.44□□□□□ -0.58
Bdnf-204ENSMUST00000111044 NefmP08553 848 aa11.43□□□□□ -0.58
Bdnf-204ENSMUST00000111044 Ccdc136Q3TVA9 1136 aa11.41□□□□□ -0.58
Bdnf-204ENSMUST00000111044 Aplp2Q06335 707 aa11.39□□□□□ -0.59
Bdnf-204ENSMUST00000111044 Csrnp3P59055 597 aa11.39□□□□□ -0.59
Bdnf-204ENSMUST00000111044 Rb1cc1Q9ESK9 1588 aa11.36□□□□□ -0.59
Bdnf-204ENSMUST00000111044 Kdm5dQ62240 1548 aa11.28□□□□□ -0.6
Bdnf-204ENSMUST00000111044 Cdk11bP24788 784 aaKnown RBP11.27□□□□□ -0.61
Bdnf-204ENSMUST00000111044 Sall2Q9QX96 1004 aa11.27□□□□□ -0.61
Bdnf-204ENSMUST00000111044 Bcl11aQ9QYE3 773 aa11.22□□□□□ -0.61
Bdnf-204ENSMUST00000111044 Wdr66E9Q743 1299 aa11.22□□□□□ -0.61
Bdnf-204ENSMUST00000111044 Baz1aO88379 1555 aa11.2□□□□□ -0.62
Bdnf-204ENSMUST00000111044 NacadQ5SWP3 1504 aa11.2□□□□□ -0.62
Bdnf-204ENSMUST00000111044 Nop58Q6DFW4 536 aaKnown RBP11.19□□□□□ -0.62
Bdnf-204ENSMUST00000111044 Mier1Q5UAK0 511 aa11.08□□□□□ -0.64
Bdnf-204ENSMUST00000111044 Cep164Q5DU05 1446 aa11.08□□□□□ -0.64
Bdnf-204ENSMUST00000111044 Amer1Q7TS75 1132 aa11.05□□□□□ -0.64
Bdnf-204ENSMUST00000111044 ClspnQ80YR7 1315 aa11.05□□□□□ -0.64
Bdnf-204ENSMUST00000111044 Pelp1Q9DBD5 1123 aaKnown RBP11.02□□□□□ -0.65
Bdnf-204ENSMUST00000111044 Gm38655A0A286YDK6 273 aa11.01□□□□□ -0.65
Bdnf-204ENSMUST00000111044 Tnnt3Q9QZ47 272 aa11□□□□□ -0.65
Bdnf-204ENSMUST00000111044 Rtl5Q5DTT4 599 aa10.97□□□□□ -0.65
Bdnf-204ENSMUST00000111044 Crybg2B7ZCC2 1516 aa10.95□□□□□ -0.66
Bdnf-204ENSMUST00000111044 Sycp2Q9CUU3 1500 aa10.95□□□□□ -0.66
Bdnf-204ENSMUST00000111044 Fam71e1A1L3C1 212 aa10.94□□□□□ -0.66
Bdnf-204ENSMUST00000111044 Smarca2Q6DIC0 1577 aa10.92□□□□□ -0.66
Bdnf-204ENSMUST00000111044 Gab3Q8BSM5 595 aa10.88□□□□□ -0.67
Bdnf-204ENSMUST00000111044 Aebp2Q9Z248 504 aaKnown RBP10.87□□□□□ -0.67
Bdnf-204ENSMUST00000111044 Anp32aO35381 247 aa10.84□□□□□ -0.67
Bdnf-204ENSMUST00000111044 PrkcshO08795 521 aa10.83□□□□□ -0.68
Bdnf-204ENSMUST00000111044 Ppargc1bQ8VHJ7 1014 aa10.8□□□□□ -0.68
Bdnf-204ENSMUST00000111044 TonslQ6NZL6 1363 aa10.79□□□□□ -0.68
Bdnf-204ENSMUST00000111044 Cecr2E9Q2Z1 1453 aa10.79□□□□□ -0.68
Bdnf-204ENSMUST00000111044 Esf1Q3V1V3 845 aaKnown RBP10.78□□□□□ -0.68
Bdnf-204ENSMUST00000111044 Mapk8ip2Q9ERE9 830 aa10.78□□□□□ -0.68
Bdnf-204ENSMUST00000111044 Chic1Q8CBW7 227 aa10.77□□□□□ -0.69
Bdnf-204ENSMUST00000111044 Brd4Q9ESU6 1400 aaKnown RBP10.77□□□□□ -0.69
Bdnf-204ENSMUST00000111044 UbtfP25976 765 aaKnown RBP10.76□□□□□ -0.69
Bdnf-204ENSMUST00000111044 Stra8P70278 393 aa10.76□□□□□ -0.69
Bdnf-204ENSMUST00000111044 Hnrnpul2Q00PI9 745 aaKnown RBP10.71□□□□□ -0.7
Bdnf-204ENSMUST00000111044 SafbD3YXK2 937 aaKnown RBP10.7□□□□□ -0.7
Bdnf-204ENSMUST00000111044 Rsf1E9PWW9 1441 aaKnown RBP10.69□□□□□ -0.7
Bdnf-204ENSMUST00000111044 BicraF8VPZ9 1578 aa10.68□□□□□ -0.7
Bdnf-204ENSMUST00000111044 Ifnlr1Q8CGK5 535 aa10.66□□□□□ -0.7
Bdnf-204ENSMUST00000111044 Golga3P55937 1487 aa10.64□□□□□ -0.71
Bdnf-204ENSMUST00000111044 Synj1Q8CHC4 1574 aa10.64□□□□□ -0.71
Bdnf-204ENSMUST00000111044 Ccdc88bQ4QRL3 1481 aa10.62□□□□□ -0.71
Bdnf-204ENSMUST00000111044 CftrP26361 1476 aa10.59□□□□□ -0.71
Bdnf-204ENSMUST00000111044 Ttbk1Q6PCN3 1308 aa10.59□□□□□ -0.71
Bdnf-204ENSMUST00000111044 Ccdc9Q8VC31 543 aaKnown RBP10.57□□□□□ -0.72
Bdnf-204ENSMUST00000111044 Ap3b1Q9Z1T1 1105 aa10.55□□□□□ -0.72
Bdnf-204ENSMUST00000111044 Calr4Q3TQS0 420 aa10.54□□□□□ -0.72
Bdnf-204ENSMUST00000111044 Hdac5Q9Z2V6 1113 aa10.54□□□□□ -0.72
Bdnf-204ENSMUST00000111044 Supt16hQ920B9 1047 aa10.48□□□□□ -0.73
Bdnf-204ENSMUST00000111044 Smarca4Q3TKT4 1613 aaKnown RBP10.46□□□□□ -0.73
Bdnf-204ENSMUST00000111044 Ccdc27Q3V036 639 aa10.46□□□□□ -0.73
Bdnf-204ENSMUST00000111044 Cttnbp2B9EJA2 1648 aa10.45□□□□□ -0.74
Bdnf-204ENSMUST00000111044 Upf2A2AT37 1269 aaKnown RBP10.45□□□□□ -0.74
Bdnf-204ENSMUST00000111044 Nolc1E9Q5C9 702 aaKnown RBP10.45□□□□□ -0.74
Bdnf-204ENSMUST00000111044 Myt1lP97500 1187 aa10.42□□□□□ -0.74
Bdnf-204ENSMUST00000111044 Wdr43Q6ZQL4 677 aaKnown RBP10.42□□□□□ -0.74
Bdnf-204ENSMUST00000111044 Irx3P81067 507 aa10.42□□□□□ -0.74
Bdnf-204ENSMUST00000111044 NrdcQ8BHG1 1161 aa10.42□□□□□ -0.74
Bdnf-204ENSMUST00000111044 Gtf3c3Q3TMP1 882 aa10.42□□□□□ -0.74
Bdnf-204ENSMUST00000111044 Pknox2Q8BG99 474 aa10.4□□□□□ -0.74
Bdnf-204ENSMUST00000111044 Ppp4r2Q0VGB7 417 aa10.4□□□□□ -0.74
Bdnf-204ENSMUST00000111044 Znf710Q3U288 666 aa10.4□□□□□ -0.74
Bdnf-204ENSMUST00000111044 Top2bQ64511 1612 aa10.4□□□□□ -0.75
Bdnf-204ENSMUST00000111044 Npm2Q80W85 207 aa10.38□□□□□ -0.75
Bdnf-204ENSMUST00000111044 Hsp90aa1P07901 733 aaKnown RBP10.37□□□□□ -0.75
Bdnf-204ENSMUST00000111044 Fgd1P52734 960 aa10.37□□□□□ -0.75
Bdnf-204ENSMUST00000111044 4933416C03RikQ3V063 378 aa10.36□□□□□ -0.75
Bdnf-204ENSMUST00000111044 Cc2d2aQ8CFW7 1633 aa10.35□□□□□ -0.75
Bdnf-204ENSMUST00000111044 Iqgap2Q3UQ44 1575 aa10.34□□□□□ -0.75
Bdnf-204ENSMUST00000111044 Fmn1Q05860 1466 aa10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 9.9 ms