RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Igkv4-72A0A0B4J1I4 117 aa8.03□□□□□ -1.12
Col9a1-202ENSMUST00000088349 MifP34884 115 aaKnown RBP8.03□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Ighv2-9-1A0A075B697 116 aa8.03□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Lyrm9Q3UN90 78 aa8.03□□□□□ -1.12
Col9a1-202ENSMUST00000088349 Smim26Q3V460 107 aa8.03□□□□□ -1.12
Col9a1-202ENSMUST00000088349 7530416G11RikJ3QJX6 159 aa8.02□□□□□ -1.13
Col9a1-202ENSMUST00000088349 4930519P11RikQ9CUJ8 166 aa8.02□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Igkv4-53A0A0G2JFC6 119 aa8.01□□□□□ -1.13
Col9a1-202ENSMUST00000088349 1810062G17RikG3X8Y2 129 aa8.01□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Znf414Q9DCK4 299 aa8.01□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Cystm1Q8K353 104 aa8.01□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Wfdc12Q9JHY3 85 aa8.01□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Igkv4-54A0A0G2JES9 117 aa8.01□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Krtap16-1A2A5X5 502 aa8□□□□□ -1.13
Col9a1-202ENSMUST00000088349 PrcdQ00LT2 53 aa8□□□□□ -1.13
Col9a1-202ENSMUST00000088349 MplkipQ9D011 178 aa8□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Ifitm6A0A1B0GS75 124 aa8□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Krtap24-1G3X9A2 248 aa8□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Erdr1J3QMM0 206 aa8□□□□□ -1.13
Col9a1-202ENSMUST00000088349 CrygdP04342 174 aa7.99□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Ighv1-56A0A0A6YXG2 117 aa7.99□□□□□ -1.13
Col9a1-202ENSMUST00000088349 4930518I15RikQ3V2W7 57 aa7.99□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Srrm2Q8BTI8 2703 aaKnown RBP7.98□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Trav9n-4A0A075B631 113 aa7.98□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Igkv8-16A0A0G2JDG9 121 aa7.98□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Rpl18aP62717 176 aaKnown RBP7.97□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Odf3l2Q3TZ65 277 aa7.97□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Tmem86bQ497J1 226 aa7.97□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Igkv8-18A0A0B4J1J3 123 aa7.97□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Igkv4-58A0A0G2JGI6 119 aa7.97□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Gm10518F6UQQ9 182 aa7.97□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Gm10845Q3UNY9 185 aa7.97□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Tmem243B2RVB9 118 aa7.97□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Gm7138L7N2C3 230 aa7.97□□□□□ -1.13
Col9a1-202ENSMUST00000088349 Gm3238W4VSP7 230 aa7.97□□□□□ -1.13
Col9a1-202ENSMUST00000088349 E130218I03RikA0A0U1RNU5 63 aa7.96□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Spink4O35679 86 aa7.96□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Defa23Q5G866 93 aa7.96□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Tmem223Q9CQE2 199 aaKnown RBP7.96□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Klk11Q9QYN3 276 aa7.96□□□□□ -1.14
Col9a1-202ENSMUST00000088349 VwfQ8CIZ8 2813 aa7.95□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Igkv8-24A0A140T8P5 121 aa7.95□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Gm5153P01627 120 aa7.95□□□□□ -1.14
Col9a1-202ENSMUST00000088349 C530025M09RikF6RGA8 229 aa7.94□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Fam19a1Q7TPG8 133 aa7.94□□□□□ -1.14
Col9a1-202ENSMUST00000088349 EnhoQ8K1D8 76 aa7.94□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Q9DAA7 145 aa7.94□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Reg3dQ9QUS9 175 aa7.94□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Tmem254aP0DN89 123 aa7.94□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Tmem254bP0DN90 123 aa7.94□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Tmem254cP0DN91 123 aa7.94□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Trbv13-2A0A140T8N6 113 aa7.93□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Gm10320E9PW43 113 aa7.93□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Higd2aQ9CQJ1 106 aa7.93□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Fn1P11276 2477 aaKnown RBP7.92□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Gm43218A0A0G2JGT0 114 aa7.92□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Igkv3-9A0A140T8P4 119 aa7.92□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Gm7137J3QMW1 236 aa7.92□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Serp2Q6TAW2 65 aa7.91□□□□□ -1.14
Col9a1-202ENSMUST00000088349 A0A286YCN5 57 aa7.9□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Lamtor3O88653 124 aa7.9□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Ighv1-59A0A0A6YXE0 117 aa7.9□□□□□ -1.14
Col9a1-202ENSMUST00000088349 Igkv4-61A0A0G2JH00 117 aa7.89□□□□□ -1.15
Col9a1-202ENSMUST00000088349 E130208F15RikQ3UPV3 143 aa7.89□□□□□ -1.15
Col9a1-202ENSMUST00000088349 B230307C23RikQ8BLB2 64 aa7.89□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Q8R092 253 aa7.89□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Mrpl52Q9D0Y8 121 aa7.89□□□□□ -1.15
Col9a1-202ENSMUST00000088349 D730001G18RikA0A087WQU7 115 aa7.89□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Ntn5Q3UQ22 452 aa7.89□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Gm9903Q8C9Y8 129 aa7.89□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Ormdl1Q921I0 153 aa7.89□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Igkv8-21A0A140T8P7 120 aa7.89□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Fam229bQ8CF36 80 aa7.89□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Igkv8-27A0A0G2JF28 120 aa7.88□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Igkv8-30A0A140T8M3 121 aa7.88□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Ubl5Q9EPV8 73 aa7.88□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Gm9805F6YK59 57 aa7.88□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Dad1P61804 113 aa7.88□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Sprr1bQ62267 153 aa7.88□□□□□ -1.15
Col9a1-202ENSMUST00000088349 A830031A19RikQ8BNT5 113 aa7.88□□□□□ -1.15
Col9a1-202ENSMUST00000088349 CrygfQ9CXV3 174 aa7.88□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Ighv10-3A0A075B5T6 119 aa7.87□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Krtap11-1E9Q2E9 183 aa7.87□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Igkv8-26A0A075B5N5 123 aa7.86□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Ube2d4D3YUH6 135 aa7.86□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Ighv13-2A0A0A6YWN3 119 aa7.85□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Igkv1-88A0A140T8N1 120 aa7.85□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Igkv3-1A0A075B5P1 119 aa7.84□□□□□ -1.15
Col9a1-202ENSMUST00000088349 HrnrQ8VHD8 2496 aa7.84□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Tcl1b3P56842 122 aa7.84□□□□□ -1.15
Col9a1-202ENSMUST00000088349 Ighv2-9A0A075B5Q5 116 aa7.83□□□□□ -1.16
Col9a1-202ENSMUST00000088349 P01819 144 aa7.83□□□□□ -1.16
Col9a1-202ENSMUST00000088349 Cox7bP56393 80 aa7.83□□□□□ -1.16
Col9a1-202ENSMUST00000088349 CrygeQ03740 174 aa7.82□□□□□ -1.16
Col9a1-202ENSMUST00000088349 Defb37Q7TMD2 62 aa7.82□□□□□ -1.16
Col9a1-202ENSMUST00000088349 4930556J24RikQ9D4U7 146 aa7.82□□□□□ -1.16
Col9a1-202ENSMUST00000088349 BikO70337 150 aa7.82□□□□□ -1.16
Col9a1-202ENSMUST00000088349 GhrhP16043 103 aa7.82□□□□□ -1.16
Col9a1-202ENSMUST00000088349 Gm10308Q9CVR5 141 aa7.82□□□□□ -1.16
Col9a1-202ENSMUST00000088349 Gm17689B3GLJ4 109 aa7.82□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 51.1 ms