RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Sprr1bQ62267 153 aa6.59□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 A330070K13RikQ8CA53 115 aa6.59□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Msrb1Q9JLC3 116 aa6.59□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Pcnx1Q9QYC1 2344 aa6.59□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Gm10772F7AIG4 85 aa6.58□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Gm10553J3QPF1 123 aa6.58□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 U90926O08546 118 aa6.58□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Sprr3O09116 238 aa6.58□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Defb12Q8K4N3 78 aa6.58□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Sprr2jO70561 109 aa6.58□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Sorl1O88307 2215 aaKnown RBP6.57□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Map1bP14873 2464 aaKnown RBP6.57□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Smim29Q8R043 75 aa6.57□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Gm10226O88253 85 aa6.56□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Elof1P60003 83 aa6.56□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Lama5Q61001 3718 aa6.56□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Trav13-2A0A075B649 110 aa6.55□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Sfta2E9PXB6 77 aa6.55□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 P01786 117 aa6.55□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Tcl1b5P56845 121 aa6.54□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Chchd7Q8K2Q5 85 aa6.54□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Spink4O35679 86 aa6.54□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Igkv4-72A0A0B4J1I4 117 aa6.54□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 LrbaQ9ESE1 2856 aa6.54□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 B9d2Q3UK10 175 aa6.53□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 NbeaQ9EPN1 2936 aa6.53□□□□□ -1.36
Hmgb1-201ENSMUST00000085546 Gm10518F6UQQ9 182 aa6.52□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Dopey1Q8BL99 2399 aa6.52□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Gm9970F6ZED4 185 aa6.52□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Cacna1hO88427 2365 aa6.51□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Igkv3-2A0A075B5P0 119 aa6.51□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Gm43218A0A0G2JGT0 114 aa6.51□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Reg3gO09049 174 aa6.51□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Gm9821Q8K076 103 aa6.5□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Igkv3-7A0A0G2JE31 119 aa6.5□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Akap6E9Q9K8 2307 aa6.49□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Col6a6Q8C6K9 2265 aa6.49□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Cela2aP05208 271 aa6.49□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 2010109I03RikQ9CQ11 111 aa6.49□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Reg3dQ9QUS9 175 aa6.49□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Ncor1Q60974 2453 aa6.49□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 LystP97412 3788 aa6.48□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Spta1P08032 2415 aa6.48□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Igkv3-12A0A140T8P0 119 aa6.48□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 C130032M10RikQ8C888 123 aa6.48□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 AY074887Q8R5F9 132 aa6.48□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Cep290Q6A078 2472 aa6.47□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Gm9767G3X930 207 aa6.47□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Rif1Q6PR54 2419 aaKnown RBP6.47□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Igkv8-16A0A0G2JDG9 121 aa6.47□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 SptssbQ925E8 76 aa6.47□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Tomm7Q9D173 55 aa6.47□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Lypd5Q9D7Z7 256 aa6.47□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Armcx4E9PWM3 2356 aa6.46□□□□□ -1.37
Hmgb1-201ENSMUST00000085546 Chd9Q8BYH8 2885 aa6.46□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Med13lQ6JPI3 2207 aa6.46□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 2310034C09RikQ9D746 214 aa6.46□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Igkv3-1A0A075B5P1 119 aa6.45□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Psors1c2Q80ZC9 134 aa6.45□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Mrpl34Q99N91 92 aa6.45□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Gpha2Q925Q5 128 aa6.45□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Wfdc12Q9JHY3 85 aa6.45□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Ly6c2P0CW03 131 aa6.44□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Gm17521F6QAC8 156 aa6.44□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Ptprz1B9EKR1 2312 aa6.44□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Ndufb1P0DN34 57 aa6.44□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Defb37Q7TMD2 62 aa6.44□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Gm37013Q8K491 104 aa6.44□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Trank1Q8BV79 2999 aa6.44□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Gm16485Q8C4B7 115 aa6.43□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Nop10Q9CQS2 64 aa6.43□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Phxr5P08399 672 aa6.43□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Ccl21aP84444 133 aa6.42□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Cox7b2Q9D2H1 82 aa6.42□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Igkv4-61A0A0G2JH00 117 aa6.41□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Cox6a2P43023 97 aa6.41□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Gm7276Q3TYW4 209 aa6.41□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Abca4O35600 2310 aa6.41□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Defb42Q8BVB5 75 aa6.41□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Adgrg4B7ZCC9 3073 aa6.41□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Gm44790A0A0N4SV91 103 aa6.4□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Igkv3-4A0A140T8Q4 119 aa6.4□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 PlaurP35456 327 aa6.4□□□□□ -1.38
Hmgb1-201ENSMUST00000085546 Notch3Q61982 2318 aa6.4□□□□□ -1.39
Hmgb1-201ENSMUST00000085546 Igkv4-54A0A0G2JES9 117 aa6.4□□□□□ -1.39
Hmgb1-201ENSMUST00000085546 CrebbpP45481 2441 aa6.39□□□□□ -1.39
Hmgb1-201ENSMUST00000085546 A0A286YE49 62 aa6.38□□□□□ -1.39
Hmgb1-201ENSMUST00000085546 Cypt14J3QPF7 87 aa6.38□□□□□ -1.39
Hmgb1-201ENSMUST00000085546 Plac8Q9JI48 112 aa6.38□□□□□ -1.39
Hmgb1-201ENSMUST00000085546 Gvin1Q80SU7 2427 aa6.37□□□□□ -1.39
Hmgb1-201ENSMUST00000085546 Ccl21bP86792 133 aa6.37□□□□□ -1.39
Hmgb1-201ENSMUST00000085546 Ccl21cP86793 133 aa6.37□□□□□ -1.39
Hmgb1-201ENSMUST00000085546 1700074P13RikQ9D9G7 251 aa6.37□□□□□ -1.39
Hmgb1-201ENSMUST00000085546 Spg11Q3UHA3 2430 aa6.37□□□□□ -1.39
Hmgb1-201ENSMUST00000085546 Cypt15B1AXS0 87 aa6.36□□□□□ -1.39
Hmgb1-201ENSMUST00000085546 Gm3443F7CCV5 94 aa6.36□□□□□ -1.39
Hmgb1-201ENSMUST00000085546 Gm12216A0A1W2P827 62 aa6.35□□□□□ -1.39
Hmgb1-201ENSMUST00000085546 A0A286YCN5 57 aa6.35□□□□□ -1.39
Hmgb1-201ENSMUST00000085546 Helz2E9QAM5 2947 aaKnown RBP6.35□□□□□ -1.39
Hmgb1-201ENSMUST00000085546 Chtf8P0CG14 533 aa6.35□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 47.8 ms