RNA–Protein interactions for RNA: ENSMUST00000047479.2

Pcdhac2-201, Transcript of Protocadherin alpha C2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2-201ENSMUST00000047479 Znf580Q9DB38 172 aa12.36□□□□□ -0.43
Pcdhac2-201ENSMUST00000047479 Golgb1E9PVZ8 3238 aa12.36□□□□□ -0.43
Pcdhac2-201ENSMUST00000047479 Gm10549Q3URY4 149 aa12.35□□□□□ -0.43
Pcdhac2-201ENSMUST00000047479 Rtl10D3YWW5 146 aa12.35□□□□□ -0.43
Pcdhac2-201ENSMUST00000047479 Col4a2P08122 1707 aa12.34□□□□□ -0.43
Pcdhac2-201ENSMUST00000047479 UqcrqQ9CQ69 82 aa12.34□□□□□ -0.43
Pcdhac2-201ENSMUST00000047479 Cd164Q9R0L9 197 aa12.33□□□□□ -0.44
Pcdhac2-201ENSMUST00000047479 A830031A19RikQ8BNT5 113 aa12.32□□□□□ -0.44
Pcdhac2-201ENSMUST00000047479 Gm16181B0V2H2 73 aa12.32□□□□□ -0.44
Pcdhac2-201ENSMUST00000047479 Col27a1Q5QNQ9 1845 aa12.31□□□□□ -0.44
Pcdhac2-201ENSMUST00000047479 A730009L09RikA0A1B0GS82 72 aa12.31□□□□□ -0.44
Pcdhac2-201ENSMUST00000047479 BC025920Q3US60 128 aa12.3□□□□□ -0.44
Pcdhac2-201ENSMUST00000047479 Piezo2Q8CD54 2822 aa12.3□□□□□ -0.44
Pcdhac2-201ENSMUST00000047479 Hivep3A2A884 2348 aa12.29□□□□□ -0.44
Pcdhac2-201ENSMUST00000047479 Ighv1-56A0A0A6YXG2 117 aa12.28□□□□□ -0.44
Pcdhac2-201ENSMUST00000047479 Gm10135F6TEE5 83 aa12.28□□□□□ -0.44
Pcdhac2-201ENSMUST00000047479 Gm10642Q3TWM1 71 aa12.28□□□□□ -0.44
Pcdhac2-201ENSMUST00000047479 Gm43218A0A0G2JGT0 114 aa12.27□□□□□ -0.45
Pcdhac2-201ENSMUST00000047479 Gm19935A0A1B0GSF9 52 aa12.27□□□□□ -0.45
Pcdhac2-201ENSMUST00000047479 Gm10570F6VB42 170 aa12.26□□□□□ -0.45
Pcdhac2-201ENSMUST00000047479 Reg3aO09037 175 aa12.25□□□□□ -0.45
Pcdhac2-201ENSMUST00000047479 PtprqP0C5E4 2300 aa12.24□□□□□ -0.45
Pcdhac2-201ENSMUST00000047479 Fam19a3Q7TPG6 132 aa12.24□□□□□ -0.45
Pcdhac2-201ENSMUST00000047479 Ptpn13Q64512 2453 aa12.24□□□□□ -0.45
Pcdhac2-201ENSMUST00000047479 Crip3Q6Q6R3 243 aa12.23□□□□□ -0.45
Pcdhac2-201ENSMUST00000047479 4930519P11RikQ9CUJ8 166 aa12.23□□□□□ -0.45
Pcdhac2-201ENSMUST00000047479 Gm17606F6ZL36 78 aa12.22□□□□□ -0.45
Pcdhac2-201ENSMUST00000047479 Krtap24-1G3X9A2 248 aa12.21□□□□□ -0.45
Pcdhac2-201ENSMUST00000047479 Defb37Q7TMD2 62 aa12.21□□□□□ -0.45
Pcdhac2-201ENSMUST00000047479 Chchd10Q7TNL9 138 aa12.21□□□□□ -0.46
Pcdhac2-201ENSMUST00000047479 3110070M22RikQ9DAQ7 118 aa12.2□□□□□ -0.46
Pcdhac2-201ENSMUST00000047479 E130208F15RikQ3UPV3 143 aa12.19□□□□□ -0.46
Pcdhac2-201ENSMUST00000047479 Cox6a2P43023 97 aa12.19□□□□□ -0.46
Pcdhac2-201ENSMUST00000047479 Spink13Q3UTS8 97 aa12.19□□□□□ -0.46
Pcdhac2-201ENSMUST00000047479 Spata3Q9D9T6 193 aa12.18□□□□□ -0.46
Pcdhac2-201ENSMUST00000047479 Gm11627A6PWP4 55 aa12.18□□□□□ -0.46
Pcdhac2-201ENSMUST00000047479 1700018G05RikA0A1B0GSI2 66 aa12.17□□□□□ -0.46
Pcdhac2-201ENSMUST00000047479 Usp9xP70398 2559 aaKnown RBP12.17□□□□□ -0.46
Pcdhac2-201ENSMUST00000047479 AI606181Q8C7B9 129 aa12.17□□□□□ -0.46
Pcdhac2-201ENSMUST00000047479 Mrpl34Q99N91 92 aa12.17□□□□□ -0.46
Pcdhac2-201ENSMUST00000047479 Gm3250E9Q1M3 230 aa12.16□□□□□ -0.46
Pcdhac2-201ENSMUST00000047479 Gm10337F7DEP7 55 aa12.16□□□□□ -0.46
Pcdhac2-201ENSMUST00000047479 Zfp462B1AWL2 2495 aaKnown RBP12.16□□□□□ -0.46
Pcdhac2-201ENSMUST00000047479 2310034G01RikA0A286YDL3 209 aa12.16□□□□□ -0.46
Pcdhac2-201ENSMUST00000047479 Gm9903Q8C9Y8 129 aa12.15□□□□□ -0.46
Pcdhac2-201ENSMUST00000047479 CrygaP04345 174 aa12.15□□□□□ -0.46
Pcdhac2-201ENSMUST00000047479 TrrapQ80YV3 2565 aaKnown RBP12.15□□□□□ -0.47
Pcdhac2-201ENSMUST00000047479 Col5a1O88207 1838 aa12.14□□□□□ -0.47
Pcdhac2-201ENSMUST00000047479 Bean1Q9EQG5 255 aa12.14□□□□□ -0.47
Pcdhac2-201ENSMUST00000047479 Msrb1Q9JLC3 116 aa12.14□□□□□ -0.47
Pcdhac2-201ENSMUST00000047479 Znf414Q9DCK4 299 aa12.13□□□□□ -0.47
Pcdhac2-201ENSMUST00000047479 Dmac1Q9CQ00 111 aa12.11□□□□□ -0.47
Pcdhac2-201ENSMUST00000047479 MobpQ9D2P8 170 aa12.11□□□□□ -0.47
Pcdhac2-201ENSMUST00000047479 Snhg11Q4G0K9 87 aa12.11□□□□□ -0.47
Pcdhac2-201ENSMUST00000047479 SnurfQ9WU12 71 aa12.11□□□□□ -0.47
Pcdhac2-201ENSMUST00000047479 Phf5aP83870 110 aaKnown RBP12.09□□□□□ -0.47
Pcdhac2-201ENSMUST00000047479 Defb50Q6TU36 73 aa12.08□□□□□ -0.48
Pcdhac2-201ENSMUST00000047479 RetnlbQ99P86 105 aa12.07□□□□□ -0.48
Pcdhac2-201ENSMUST00000047479 Gpr15lA0A0B4J1N3 78 aa12.07□□□□□ -0.48
Pcdhac2-201ENSMUST00000047479 Gm21886J3QJU9 214 aa12.06□□□□□ -0.48
Pcdhac2-201ENSMUST00000047479 Coa6Q8BGD8 79 aa12.06□□□□□ -0.48
Pcdhac2-201ENSMUST00000047479 1810062G17RikG3X8Y2 129 aa12.06□□□□□ -0.48
Pcdhac2-201ENSMUST00000047479 Smr3aQ61900 147 aa12.05□□□□□ -0.48
Pcdhac2-201ENSMUST00000047479 Gm26661M0QWV4 156 aa12.04□□□□□ -0.48
Pcdhac2-201ENSMUST00000047479 Gm10160F6Y577 67 aa12.04□□□□□ -0.48
Pcdhac2-201ENSMUST00000047479 P01819 144 aa12.03□□□□□ -0.48
Pcdhac2-201ENSMUST00000047479 Gm10999F6Q4M4 69 aa12.03□□□□□ -0.48
Pcdhac2-201ENSMUST00000047479 SetxA2AKX3 2646 aa12.02□□□□□ -0.48
Pcdhac2-201ENSMUST00000047479 Csdc2Q91YQ3 154 aa12.02□□□□□ -0.48
Pcdhac2-201ENSMUST00000047479 Elof1P60003 83 aa12.02□□□□□ -0.49
Pcdhac2-201ENSMUST00000047479 Gm10837Q3UTT8 145 aa12.01□□□□□ -0.49
Pcdhac2-201ENSMUST00000047479 Spaca4Q80ZQ0 127 aa12.01□□□□□ -0.49
Pcdhac2-201ENSMUST00000047479 6430550D23RikE9Q1X6 194 aa12.01□□□□□ -0.49
Pcdhac2-201ENSMUST00000047479 Ighv2-5A0A0A6YY69 116 aa12□□□□□ -0.49
Pcdhac2-201ENSMUST00000047479 Gm44790A0A0N4SV91 103 aa11.98□□□□□ -0.49
Pcdhac2-201ENSMUST00000047479 Sostdc1Q9CQN4 206 aa11.98□□□□□ -0.49
Pcdhac2-201ENSMUST00000047479 A930002H24RikQ8C8Y3 163 aa11.97□□□□□ -0.49
Pcdhac2-201ENSMUST00000047479 Defb45Q3V490 66 aa11.96□□□□□ -0.49
Pcdhac2-201ENSMUST00000047479 Gm12216A0A1W2P827 62 aa11.95□□□□□ -0.5
Pcdhac2-201ENSMUST00000047479 4930518I15RikQ3V2W7 57 aa11.94□□□□□ -0.5
Pcdhac2-201ENSMUST00000047479 Setd2E9Q5F9 2537 aa11.94□□□□□ -0.5
Pcdhac2-201ENSMUST00000047479 Igkv8-27A0A0G2JF28 120 aa11.94□□□□□ -0.5
Pcdhac2-201ENSMUST00000047479 Gm5617Q91VN2 117 aa11.93□□□□□ -0.5
Pcdhac2-201ENSMUST00000047479 Gm10197F6QEY5 67 aa11.93□□□□□ -0.5
Pcdhac2-201ENSMUST00000047479 Prol1E9PYQ4 312 aa11.92□□□□□ -0.5
Pcdhac2-201ENSMUST00000047479 Cdip1Q9DB75 208 aa11.92□□□□□ -0.5
Pcdhac2-201ENSMUST00000047479 Ighv2-2A0A075B5P8 116 aa11.92□□□□□ -0.5
Pcdhac2-201ENSMUST00000047479 P01821 116 aa11.92□□□□□ -0.5
Pcdhac2-201ENSMUST00000047479 PolqQ8CGS6 2544 aa11.91□□□□□ -0.5
Pcdhac2-201ENSMUST00000047479 Gm27235Q3UW50 83 aa11.9□□□□□ -0.5
Pcdhac2-201ENSMUST00000047479 Psors1c2Q80ZC9 134 aa11.9□□□□□ -0.5
Pcdhac2-201ENSMUST00000047479 Gm10772F7AIG4 85 aa11.89□□□□□ -0.51
Pcdhac2-201ENSMUST00000047479 Krtap26-1Q9D7N2 215 aa11.89□□□□□ -0.51
Pcdhac2-201ENSMUST00000047479 Bahcc1Q3UHR0 2643 aa11.88□□□□□ -0.51
Pcdhac2-201ENSMUST00000047479 Gm10770F7D043 238 aa11.88□□□□□ -0.51
Pcdhac2-201ENSMUST00000047479 MtorQ9JLN9 2549 aa11.87□□□□□ -0.51
Pcdhac2-201ENSMUST00000047479 4930507D05RikQ8C9C9 103 aa11.87□□□□□ -0.51
Pcdhac2-201ENSMUST00000047479 UtrnE9Q6R7 3430 aa11.86□□□□□ -0.51
Pcdhac2-201ENSMUST00000047479 Rpl37aP61514 92 aa11.85□□□□□ -0.51
Pcdhac2-201ENSMUST00000047479 Gm17689B3GLJ4 109 aa11.85□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 70.8 ms