RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Prol1E9PYQ4 312 aa10.09□□□□□ -0.79
Col4a1-201ENSMUST00000033898 Znf580Q9DB38 172 aa10.09□□□□□ -0.79
Col4a1-201ENSMUST00000033898 Prr9Q8BV84 116 aa10.08□□□□□ -0.8
Col4a1-201ENSMUST00000033898 Mrpl34Q99N91 92 aa10.08□□□□□ -0.8
Col4a1-201ENSMUST00000033898 Defb45Q3V490 66 aa10.07□□□□□ -0.8
Col4a1-201ENSMUST00000033898 AI606181Q8C7B9 129 aa10.07□□□□□ -0.8
Col4a1-201ENSMUST00000033898 Pkd1l2Q7TN88 2461 aa10.06□□□□□ -0.8
Col4a1-201ENSMUST00000033898 BC067074F6RXI4 2391 aa10.06□□□□□ -0.8
Col4a1-201ENSMUST00000033898 A830031A19RikQ8BNT5 113 aa10.06□□□□□ -0.8
Col4a1-201ENSMUST00000033898 Nav2E9Q842 2432 aa10.06□□□□□ -0.8
Col4a1-201ENSMUST00000033898 Ighv2-5A0A0A6YY69 116 aa10.06□□□□□ -0.8
Col4a1-201ENSMUST00000033898 Tns1E9Q0S6 1888 aaKnown RBP10.05□□□□□ -0.8
Col4a1-201ENSMUST00000033898 Gm3250E9Q1M3 230 aa10.02□□□□□ -0.8
Col4a1-201ENSMUST00000033898 Cox6a2P43023 97 aa10.02□□□□□ -0.8
Col4a1-201ENSMUST00000033898 AcacbE9Q4Z2 2448 aa10.02□□□□□ -0.81
Col4a1-201ENSMUST00000033898 Gm43218A0A0G2JGT0 114 aa10.02□□□□□ -0.81
Col4a1-201ENSMUST00000033898 Rtl10D3YWW5 146 aa10.01□□□□□ -0.81
Col4a1-201ENSMUST00000033898 Rif1Q6PR54 2419 aaKnown RBP10.01□□□□□ -0.81
Col4a1-201ENSMUST00000033898 A930002H24RikQ8C8Y3 163 aa10.01□□□□□ -0.81
Col4a1-201ENSMUST00000033898 Gm9903Q8C9Y8 129 aa10□□□□□ -0.81
Col4a1-201ENSMUST00000033898 Gm10197F6QEY5 67 aa10□□□□□ -0.81
Col4a1-201ENSMUST00000033898 Msrb1Q9JLC3 116 aa10□□□□□ -0.81
Col4a1-201ENSMUST00000033898 AplnQ9R0R4 77 aa10□□□□□ -0.81
Col4a1-201ENSMUST00000033898 Phf5aP83870 110 aaKnown RBP10□□□□□ -0.81
Col4a1-201ENSMUST00000033898 Spaca4Q80ZQ0 127 aa10□□□□□ -0.81
Col4a1-201ENSMUST00000033898 B430305J03RikQ8BQQ8 176 aa9.99□□□□□ -0.81
Col4a1-201ENSMUST00000033898 Sostdc1Q9CQN4 206 aa9.99□□□□□ -0.81
Col4a1-201ENSMUST00000033898 Defb11Q8R2I7 77 aa9.99□□□□□ -0.81
Col4a1-201ENSMUST00000033898 Csdc2Q91YQ3 154 aa9.99□□□□□ -0.81
Col4a1-201ENSMUST00000033898 Gm10549Q3URY4 149 aa9.98□□□□□ -0.81
Col4a1-201ENSMUST00000033898 Gpr15lA0A0B4J1N3 78 aa9.98□□□□□ -0.81
Col4a1-201ENSMUST00000033898 Gm10160F6Y577 67 aa9.98□□□□□ -0.81
Col4a1-201ENSMUST00000033898 P01819 144 aa9.98□□□□□ -0.81
Col4a1-201ENSMUST00000033898 PtprbB2RU80 1998 aa9.98□□□□□ -0.81
Col4a1-201ENSMUST00000033898 Hivep2Q3UHF7 2430 aa9.97□□□□□ -0.81
Col4a1-201ENSMUST00000033898 2310034G01RikA0A286YDL3 209 aa9.97□□□□□ -0.81
Col4a1-201ENSMUST00000033898 Rpl37aP61514 92 aa9.96□□□□□ -0.82
Col4a1-201ENSMUST00000033898 Igkv8-27A0A0G2JF28 120 aa9.96□□□□□ -0.82
Col4a1-201ENSMUST00000033898 Spint4Q9D263 159 aa9.95□□□□□ -0.82
Col4a1-201ENSMUST00000033898 Gm44790A0A0N4SV91 103 aa9.94□□□□□ -0.82
Col4a1-201ENSMUST00000033898 Gm21886J3QJU9 214 aa9.94□□□□□ -0.82
Col4a1-201ENSMUST00000033898 Fam19a3Q7TPG6 132 aa9.94□□□□□ -0.82
Col4a1-201ENSMUST00000033898 Abca2P41234 2434 aa9.94□□□□□ -0.82
Col4a1-201ENSMUST00000033898 Q9DAB9 146 aa9.94□□□□□ -0.82
Col4a1-201ENSMUST00000033898 Coa6Q8BGD8 79 aa9.93□□□□□ -0.82
Col4a1-201ENSMUST00000033898 Gm20661K7N787 53 aa9.93□□□□□ -0.82
Col4a1-201ENSMUST00000033898 4930518I15RikQ3V2W7 57 aa9.93□□□□□ -0.82
Col4a1-201ENSMUST00000033898 Gm5617Q91VN2 117 aa9.92□□□□□ -0.82
Col4a1-201ENSMUST00000033898 Lama3Q61789 3330 aa9.92□□□□□ -0.82
Col4a1-201ENSMUST00000033898 Lrp4Q8VI56 1905 aa9.91□□□□□ -0.82
Col4a1-201ENSMUST00000033898 BC025920Q3US60 128 aa9.9□□□□□ -0.82
Col4a1-201ENSMUST00000033898 Usp34Q6ZQ93 3582 aa9.9□□□□□ -0.82
Col4a1-201ENSMUST00000033898 Zfyve26Q5DU37 2529 aa9.89□□□□□ -0.83
Col4a1-201ENSMUST00000033898 E130208F15RikQ3UPV3 143 aa9.88□□□□□ -0.83
Col4a1-201ENSMUST00000033898 Snhg11Q4G0K9 87 aa9.88□□□□□ -0.83
Col4a1-201ENSMUST00000033898 Znf414Q9DCK4 299 aa9.87□□□□□ -0.83
Col4a1-201ENSMUST00000033898 Flg2Q2VIS4 2362 aa9.86□□□□□ -0.83
Col4a1-201ENSMUST00000033898 Mp68P56379 58 aa9.86□□□□□ -0.83
Col4a1-201ENSMUST00000033898 Dmac1Q9CQ00 111 aa9.86□□□□□ -0.83
Col4a1-201ENSMUST00000033898 Ep400Q8CHI8 3072 aaKnown RBP9.86□□□□□ -0.83
Col4a1-201ENSMUST00000033898 Cdip1Q9DB75 208 aa9.85□□□□□ -0.83
Col4a1-201ENSMUST00000033898 Gm42715A0A087WP63 3095 aaKnown RBP9.85□□□□□ -0.83
Col4a1-201ENSMUST00000033898 Gm16181B0V2H2 73 aa9.85□□□□□ -0.83
Col4a1-201ENSMUST00000033898 Q8BGJ3 129 aa9.85□□□□□ -0.83
Col4a1-201ENSMUST00000033898 Phxr5P08399 672 aa9.84□□□□□ -0.83
Col4a1-201ENSMUST00000033898 Nav3Q80TN7 2359 aa9.83□□□□□ -0.84
Col4a1-201ENSMUST00000033898 Gm11627A6PWP4 55 aa9.83□□□□□ -0.84
Col4a1-201ENSMUST00000033898 Fam168bQ80XQ8 194 aa9.81□□□□□ -0.84
Col4a1-201ENSMUST00000033898 Gm10770F7D043 238 aa9.81□□□□□ -0.84
Col4a1-201ENSMUST00000033898 3110070M22RikQ9DAQ7 118 aa9.81□□□□□ -0.84
Col4a1-201ENSMUST00000033898 Elof1P60003 83 aa9.8□□□□□ -0.84
Col4a1-201ENSMUST00000033898 Notch2O35516 2470 aa9.8□□□□□ -0.84
Col4a1-201ENSMUST00000033898 Krtap24-1G3X9A2 248 aa9.8□□□□□ -0.84
Col4a1-201ENSMUST00000033898 A530084C06RikQ3UTW2 186 aa9.79□□□□□ -0.84
Col4a1-201ENSMUST00000033898 Gm10837Q3UTT8 145 aa9.79□□□□□ -0.84
Col4a1-201ENSMUST00000033898 7530416G11RikJ3QJX6 159 aa9.79□□□□□ -0.84
Col4a1-201ENSMUST00000033898 Gm9573F7C950 1606 aa9.79□□□□□ -0.84
Col4a1-201ENSMUST00000033898 4930507D05RikQ8C9C9 103 aa9.79□□□□□ -0.84
Col4a1-201ENSMUST00000033898 CrygaP04345 174 aa9.77□□□□□ -0.84
Col4a1-201ENSMUST00000033898 Lrrk2Q5S006 2527 aa9.77□□□□□ -0.85
Col4a1-201ENSMUST00000033898 1810062G17RikG3X8Y2 129 aa9.76□□□□□ -0.85
Col4a1-201ENSMUST00000033898 AI854703Q8BIN3 203 aa9.76□□□□□ -0.85
Col4a1-201ENSMUST00000033898 MobpQ9D2P8 170 aa9.75□□□□□ -0.85
Col4a1-201ENSMUST00000033898 Col27a1Q5QNQ9 1845 aa9.74□□□□□ -0.85
Col4a1-201ENSMUST00000033898 Col4a2P08122 1707 aa9.74□□□□□ -0.85
Col4a1-201ENSMUST00000033898 PtprqP0C5E4 2300 aa9.74□□□□□ -0.85
Col4a1-201ENSMUST00000033898 Q8BT88 171 aa9.74□□□□□ -0.85
Col4a1-201ENSMUST00000033898 Gm26661M0QWV4 156 aa9.73□□□□□ -0.85
Col4a1-201ENSMUST00000033898 Gm17689B3GLJ4 109 aa9.72□□□□□ -0.85
Col4a1-201ENSMUST00000033898 Rnase13Q5GAM7 153 aa9.71□□□□□ -0.85
Col4a1-201ENSMUST00000033898 Gm27235Q3UW50 83 aa9.71□□□□□ -0.86
Col4a1-201ENSMUST00000033898 Limd2Q8BGB5 128 aa9.7□□□□□ -0.86
Col4a1-201ENSMUST00000033898 Ttc28Q80XJ3 2450 aa9.68□□□□□ -0.86
Col4a1-201ENSMUST00000033898 Pla2g10Q9QXX3 151 aa9.67□□□□□ -0.86
Col4a1-201ENSMUST00000033898 Ighv2-2A0A075B5P8 116 aa9.66□□□□□ -0.86
Col4a1-201ENSMUST00000033898 P01821 116 aa9.66□□□□□ -0.86
Col4a1-201ENSMUST00000033898 Krtap11-1E9Q2E9 183 aa9.65□□□□□ -0.86
Col4a1-201ENSMUST00000033898 Crip3Q6Q6R3 243 aa9.65□□□□□ -0.86
Col4a1-201ENSMUST00000033898 Dnah12Q3V0Q1 3086 aa9.65□□□□□ -0.86
Col4a1-201ENSMUST00000033898 Jbts17Q8CE72 3214 aa9.65□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 86.3 ms