RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Bean1Q9EQG5 255 aa7.78□□□□□ -1.16
Ciita-201ENSMUST00000023147 Gm10845Q3UNY9 185 aa7.77□□□□□ -1.17
Ciita-201ENSMUST00000023147 Gm42715A0A087WP63 3095 aaKnown RBP7.77□□□□□ -1.17
Ciita-201ENSMUST00000023147 Defb10Q8R2I8 73 aa7.77□□□□□ -1.17
Ciita-201ENSMUST00000023147 Tln1P26039 2541 aaKnown RBP7.76□□□□□ -1.17
Ciita-201ENSMUST00000023147 TroQ6DIC6 2087 aa7.76□□□□□ -1.17
Ciita-201ENSMUST00000023147 Arhgap32Q811P8 2089 aa7.76□□□□□ -1.17
Ciita-201ENSMUST00000023147 Usp9yF8VPU6 2556 aa7.76□□□□□ -1.17
Ciita-201ENSMUST00000023147 Ntn5Q3UQ22 452 aa7.75□□□□□ -1.17
Ciita-201ENSMUST00000023147 Prr9Q8BV84 116 aa7.75□□□□□ -1.17
Ciita-201ENSMUST00000023147 Setd2E9Q5F9 2537 aa7.75□□□□□ -1.17
Ciita-201ENSMUST00000023147 4930524J08RikQ9CUJ5 163 aa7.75□□□□□ -1.17
Ciita-201ENSMUST00000023147 Usp9xP70398 2559 aaKnown RBP7.75□□□□□ -1.17
Ciita-201ENSMUST00000023147 Gm5142Q8C5X9 133 aa7.74□□□□□ -1.17
Ciita-201ENSMUST00000023147 4930519P11RikQ9CUJ8 166 aa7.74□□□□□ -1.17
Ciita-201ENSMUST00000023147 Sptbn4E9PX29 2561 aa7.74□□□□□ -1.17
Ciita-201ENSMUST00000023147 Ighv2-9A0A075B5Q5 116 aa7.74□□□□□ -1.17
Ciita-201ENSMUST00000023147 Gm10549Q3URY4 149 aa7.74□□□□□ -1.17
Ciita-201ENSMUST00000023147 Defb39Q70KL3 74 aa7.74□□□□□ -1.17
Ciita-201ENSMUST00000023147 3110070M22RikQ9DAQ7 118 aa7.74□□□□□ -1.17
Ciita-201ENSMUST00000023147 MtorQ9JLN9 2549 aa7.73□□□□□ -1.17
Ciita-201ENSMUST00000023147 Gm20538F6Z9R1 75 aa7.73□□□□□ -1.17
Ciita-201ENSMUST00000023147 Fam19a3Q7TPG6 132 aa7.73□□□□□ -1.17
Ciita-201ENSMUST00000023147 Gm10570F6VB42 170 aa7.73□□□□□ -1.17
Ciita-201ENSMUST00000023147 Gm16485Q8C4B7 115 aa7.73□□□□□ -1.17
Ciita-201ENSMUST00000023147 Mp68P56379 58 aa7.72□□□□□ -1.17
Ciita-201ENSMUST00000023147 Gm17509Q9CZ61 145 aa7.72□□□□□ -1.17
Ciita-201ENSMUST00000023147 4930432M17RikQ3V0W9 174 aa7.71□□□□□ -1.18
Ciita-201ENSMUST00000023147 D730001G18RikA0A087WQU7 115 aa7.71□□□□□ -1.18
Ciita-201ENSMUST00000023147 Gm28230A0A0A0MQ91 144 aa7.71□□□□□ -1.18
Ciita-201ENSMUST00000023147 Igkv8-27A0A0G2JF28 120 aa7.7□□□□□ -1.18
Ciita-201ENSMUST00000023147 B230217C12RikE9Q3Z1 139 aa7.7□□□□□ -1.18
Ciita-201ENSMUST00000023147 Ighv8-13A0A075B5Y0 101 aa7.7□□□□□ -1.18
Ciita-201ENSMUST00000023147 Coa6Q8BGD8 79 aa7.7□□□□□ -1.18
Ciita-201ENSMUST00000023147 Q9DAA7 145 aa7.7□□□□□ -1.18
Ciita-201ENSMUST00000023147 Zfand2aQ9JII7 171 aa7.7□□□□□ -1.18
Ciita-201ENSMUST00000023147 UtrnE9Q6R7 3430 aa7.69□□□□□ -1.18
Ciita-201ENSMUST00000023147 Bri3P28662 125 aa7.68□□□□□ -1.18
Ciita-201ENSMUST00000023147 A930009A15RikG3UYI6 118 aa7.67□□□□□ -1.18
Ciita-201ENSMUST00000023147 Limd2Q8BGB5 128 aa7.67□□□□□ -1.18
Ciita-201ENSMUST00000023147 Tnrc18Q80WC3 2878 aa7.67□□□□□ -1.18
Ciita-201ENSMUST00000023147 Gm10160F6Y577 67 aa7.66□□□□□ -1.18
Ciita-201ENSMUST00000023147 Chchd10Q7TNL9 138 aa7.66□□□□□ -1.18
Ciita-201ENSMUST00000023147 Krtap26-1Q9D7N2 215 aa7.66□□□□□ -1.18
Ciita-201ENSMUST00000023147 TrrapQ80YV3 2565 aaKnown RBP7.65□□□□□ -1.18
Ciita-201ENSMUST00000023147 Q8BGJ3 129 aa7.65□□□□□ -1.18
Ciita-201ENSMUST00000023147 Defb2P82020 71 aa7.64□□□□□ -1.19
Ciita-201ENSMUST00000023147 CdsnQ7TPC1 561 aa7.64□□□□□ -1.19
Ciita-201ENSMUST00000023147 Gm5153P01627 120 aa7.64□□□□□ -1.19
Ciita-201ENSMUST00000023147 Defb50Q6TU36 73 aa7.64□□□□□ -1.19
Ciita-201ENSMUST00000023147 Gm3443F7CCV5 94 aa7.63□□□□□ -1.19
Ciita-201ENSMUST00000023147 Cox6a2P43023 97 aa7.63□□□□□ -1.19
Ciita-201ENSMUST00000023147 A730009L09RikA0A1B0GS82 72 aa7.63□□□□□ -1.19
Ciita-201ENSMUST00000023147 Reg3aO09037 175 aa7.63□□□□□ -1.19
Ciita-201ENSMUST00000023147 Rps28P62858 69 aaKnown RBP7.63□□□□□ -1.19
Ciita-201ENSMUST00000023147 AplnQ9R0R4 77 aa7.63□□□□□ -1.19
Ciita-201ENSMUST00000023147 Prr13Q9CQJ5 137 aa7.62□□□□□ -1.19
Ciita-201ENSMUST00000023147 SnurfQ9WU12 71 aa7.62□□□□□ -1.19
Ciita-201ENSMUST00000023147 Spint4Q9D263 159 aa7.62□□□□□ -1.19
Ciita-201ENSMUST00000023147 P01819 144 aa7.61□□□□□ -1.19
Ciita-201ENSMUST00000023147 Cd164Q9R0L9 197 aa7.61□□□□□ -1.19
Ciita-201ENSMUST00000023147 Ankrd11E9Q4F7 2643 aa7.61□□□□□ -1.19
Ciita-201ENSMUST00000023147 4930507D05RikQ8C9C9 103 aa7.61□□□□□ -1.19
Ciita-201ENSMUST00000023147 Prol1E9PYQ4 312 aa7.6□□□□□ -1.19
Ciita-201ENSMUST00000023147 Gm10197F6QEY5 67 aa7.59□□□□□ -1.19
Ciita-201ENSMUST00000023147 Odf3l2Q3TZ65 277 aa7.59□□□□□ -1.19
Ciita-201ENSMUST00000023147 A930002H24RikQ8C8Y3 163 aa7.59□□□□□ -1.19
Ciita-201ENSMUST00000023147 Cd164l2Q9D6W7 172 aa7.59□□□□□ -1.19
Ciita-201ENSMUST00000023147 2310034G01RikA0A286YDL3 209 aa7.57□□□□□ -1.2
Ciita-201ENSMUST00000023147 CrygaP04345 174 aa7.57□□□□□ -1.2
Ciita-201ENSMUST00000023147 AI606181Q8C7B9 129 aa7.56□□□□□ -1.2
Ciita-201ENSMUST00000023147 SetxA2AKX3 2646 aa7.56□□□□□ -1.2
Ciita-201ENSMUST00000023147 Gm10999F6Q4M4 69 aa7.56□□□□□ -1.2
Ciita-201ENSMUST00000023147 Defb11Q8R2I7 77 aa7.56□□□□□ -1.2
Ciita-201ENSMUST00000023147 Gm43218A0A0G2JGT0 114 aa7.55□□□□□ -1.2
Ciita-201ENSMUST00000023147 Mrpl34Q99N91 92 aa7.54□□□□□ -1.2
Ciita-201ENSMUST00000023147 HttP42859 3119 aa7.54□□□□□ -1.2
Ciita-201ENSMUST00000023147 Ighv2-5A0A0A6YY69 116 aa7.53□□□□□ -1.2
Ciita-201ENSMUST00000023147 Gm9903Q8C9Y8 129 aa7.53□□□□□ -1.2
Ciita-201ENSMUST00000023147 Gm20661K7N787 53 aa7.53□□□□□ -1.2
Ciita-201ENSMUST00000023147 Gm16181B0V2H2 73 aa7.53□□□□□ -1.2
Ciita-201ENSMUST00000023147 FasnP19096 2504 aaKnown RBP7.53□□□□□ -1.2
Ciita-201ENSMUST00000023147 Gm21886J3QJU9 214 aa7.52□□□□□ -1.2
Ciita-201ENSMUST00000023147 4930518I15RikQ3V2W7 57 aa7.52□□□□□ -1.21
Ciita-201ENSMUST00000023147 Sostdc1Q9CQN4 206 aa7.52□□□□□ -1.21
Ciita-201ENSMUST00000023147 Gm11627A6PWP4 55 aa7.51□□□□□ -1.21
Ciita-201ENSMUST00000023147 Gm10642Q3TWM1 71 aa7.51□□□□□ -1.21
Ciita-201ENSMUST00000023147 Msrb1Q9JLC3 116 aa7.51□□□□□ -1.21
Ciita-201ENSMUST00000023147 6430550D23RikE9Q1X6 194 aa7.5□□□□□ -1.21
Ciita-201ENSMUST00000023147 AI854703Q8BIN3 203 aa7.5□□□□□ -1.21
Ciita-201ENSMUST00000023147 Gpr15lA0A0B4J1N3 78 aa7.5□□□□□ -1.21
Ciita-201ENSMUST00000023147 Krtap16-1A2A5X5 502 aa7.5□□□□□ -1.21
Ciita-201ENSMUST00000023147 Znf414Q9DCK4 299 aa7.49□□□□□ -1.21
Ciita-201ENSMUST00000023147 Ighv2-2A0A075B5P8 116 aa7.49□□□□□ -1.21
Ciita-201ENSMUST00000023147 P01821 116 aa7.49□□□□□ -1.21
Ciita-201ENSMUST00000023147 Gm10837Q3UTT8 145 aa7.49□□□□□ -1.21
Ciita-201ENSMUST00000023147 Defb37Q7TMD2 62 aa7.49□□□□□ -1.21
Ciita-201ENSMUST00000023147 1700018G05RikA0A1B0GSI2 66 aa7.48□□□□□ -1.21
Ciita-201ENSMUST00000023147 Psors1c2Q80ZC9 134 aa7.48□□□□□ -1.21
Ciita-201ENSMUST00000023147 Gm17689B3GLJ4 109 aa7.47□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms