RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Gm5153P01627 120 aa9.94□□□□□ -0.82
Col1a1-201ENSMUST00000001547 Gm17509Q9CZ61 145 aa9.93□□□□□ -0.82
Col1a1-201ENSMUST00000001547 Odf3l2Q3TZ65 277 aa9.93□□□□□ -0.82
Col1a1-201ENSMUST00000001547 Gm12216A0A1W2P827 62 aa9.92□□□□□ -0.82
Col1a1-201ENSMUST00000001547 Gm10135F6TEE5 83 aa9.92□□□□□ -0.82
Col1a1-201ENSMUST00000001547 Defb39Q70KL3 74 aa9.92□□□□□ -0.82
Col1a1-201ENSMUST00000001547 Gm17606F6ZL36 78 aa9.92□□□□□ -0.82
Col1a1-201ENSMUST00000001547 Ighv2-9A0A075B5Q5 116 aa9.91□□□□□ -0.82
Col1a1-201ENSMUST00000001547 Gm16485Q8C4B7 115 aa9.9□□□□□ -0.82
Col1a1-201ENSMUST00000001547 Spint4Q9D263 159 aa9.9□□□□□ -0.82
Col1a1-201ENSMUST00000001547 Gm28230A0A0A0MQ91 144 aa9.9□□□□□ -0.83
Col1a1-201ENSMUST00000001547 Ly6g6cQ9Z1Q4 126 aa9.9□□□□□ -0.83
Col1a1-201ENSMUST00000001547 Gm10197F6QEY5 67 aa9.88□□□□□ -0.83
Col1a1-201ENSMUST00000001547 Zfand2aQ9JII7 171 aa9.88□□□□□ -0.83
Col1a1-201ENSMUST00000001547 Spink13Q3UTS8 97 aa9.87□□□□□ -0.83
Col1a1-201ENSMUST00000001547 SetxA2AKX3 2646 aa9.87□□□□□ -0.83
Col1a1-201ENSMUST00000001547 Gm10549Q3URY4 149 aa9.87□□□□□ -0.83
Col1a1-201ENSMUST00000001547 Csdc2Q91YQ3 154 aa9.87□□□□□ -0.83
Col1a1-201ENSMUST00000001547 Reg3aO09037 175 aa9.86□□□□□ -0.83
Col1a1-201ENSMUST00000001547 Coa6Q8BGD8 79 aa9.86□□□□□ -0.83
Col1a1-201ENSMUST00000001547 Q9DAA7 145 aa9.86□□□□□ -0.83
Col1a1-201ENSMUST00000001547 Ttc28Q80XJ3 2450 aa9.85□□□□□ -0.83
Col1a1-201ENSMUST00000001547 Hivep2Q3UHF7 2430 aa9.84□□□□□ -0.83
Col1a1-201ENSMUST00000001547 3110070M22RikQ9DAQ7 118 aa9.83□□□□□ -0.84
Col1a1-201ENSMUST00000001547 A730009L09RikA0A1B0GS82 72 aa9.83□□□□□ -0.84
Col1a1-201ENSMUST00000001547 Ntn5Q3UQ22 452 aa9.82□□□□□ -0.84
Col1a1-201ENSMUST00000001547 Ptpn13Q64512 2453 aa9.81□□□□□ -0.84
Col1a1-201ENSMUST00000001547 Gm43218A0A0G2JGT0 114 aa9.81□□□□□ -0.84
Col1a1-201ENSMUST00000001547 Gm28374F6SG70 93 aa9.81□□□□□ -0.84
Col1a1-201ENSMUST00000001547 4930518I15RikQ3V2W7 57 aa9.81□□□□□ -0.84
Col1a1-201ENSMUST00000001547 Gm10160F6Y577 67 aa9.8□□□□□ -0.84
Col1a1-201ENSMUST00000001547 Golgb1E9PVZ8 3238 aa9.8□□□□□ -0.84
Col1a1-201ENSMUST00000001547 Smr3aQ61900 147 aa9.8□□□□□ -0.84
Col1a1-201ENSMUST00000001547 Chchd10Q7TNL9 138 aa9.8□□□□□ -0.84
Col1a1-201ENSMUST00000001547 Cd164Q9R0L9 197 aa9.79□□□□□ -0.84
Col1a1-201ENSMUST00000001547 6430550D23RikE9Q1X6 194 aa9.78□□□□□ -0.84
Col1a1-201ENSMUST00000001547 Defb37Q7TMD2 62 aa9.78□□□□□ -0.84
Col1a1-201ENSMUST00000001547 Mrpl34Q99N91 92 aa9.78□□□□□ -0.84
Col1a1-201ENSMUST00000001547 Sostdc1Q9CQN4 206 aa9.78□□□□□ -0.84
Col1a1-201ENSMUST00000001547 Cdip1Q9DB75 208 aa9.78□□□□□ -0.84
Col1a1-201ENSMUST00000001547 Nav3Q80TN7 2359 aa9.77□□□□□ -0.85
Col1a1-201ENSMUST00000001547 Usp9xP70398 2559 aaKnown RBP9.76□□□□□ -0.85
Col1a1-201ENSMUST00000001547 Mp68P56379 58 aa9.75□□□□□ -0.85
Col1a1-201ENSMUST00000001547 Notch2O35516 2470 aa9.75□□□□□ -0.85
Col1a1-201ENSMUST00000001547 CrygaP04345 174 aa9.75□□□□□ -0.85
Col1a1-201ENSMUST00000001547 Cox6a2P43023 97 aa9.74□□□□□ -0.85
Col1a1-201ENSMUST00000001547 Krtap24-1G3X9A2 248 aa9.74□□□□□ -0.85
Col1a1-201ENSMUST00000001547 1700018G05RikA0A1B0GSI2 66 aa9.73□□□□□ -0.85
Col1a1-201ENSMUST00000001547 Gm10999F6Q4M4 69 aa9.73□□□□□ -0.85
Col1a1-201ENSMUST00000001547 Defb45Q3V490 66 aa9.73□□□□□ -0.85
Col1a1-201ENSMUST00000001547 Defb50Q6TU36 73 aa9.72□□□□□ -0.85
Col1a1-201ENSMUST00000001547 AplnQ9R0R4 77 aa9.72□□□□□ -0.85
Col1a1-201ENSMUST00000001547 Hivep3A2A884 2348 aa9.72□□□□□ -0.85
Col1a1-201ENSMUST00000001547 Gm16181B0V2H2 73 aa9.71□□□□□ -0.86
Col1a1-201ENSMUST00000001547 A530084C06RikQ3UTW2 186 aa9.71□□□□□ -0.86
Col1a1-201ENSMUST00000001547 MobpQ9D2P8 170 aa9.71□□□□□ -0.86
Col1a1-201ENSMUST00000001547 Msrb1Q9JLC3 116 aa9.7□□□□□ -0.86
Col1a1-201ENSMUST00000001547 A930002H24RikQ8C8Y3 163 aa9.7□□□□□ -0.86
Col1a1-201ENSMUST00000001547 Krtap26-1Q9D7N2 215 aa9.7□□□□□ -0.86
Col1a1-201ENSMUST00000001547 PtprqP0C5E4 2300 aa9.69□□□□□ -0.86
Col1a1-201ENSMUST00000001547 Fam19a3Q7TPG6 132 aa9.68□□□□□ -0.86
Col1a1-201ENSMUST00000001547 P01819 144 aa9.68□□□□□ -0.86
Col1a1-201ENSMUST00000001547 Limd2Q8BGB5 128 aa9.67□□□□□ -0.86
Col1a1-201ENSMUST00000001547 Gm10642Q3TWM1 71 aa9.67□□□□□ -0.86
Col1a1-201ENSMUST00000001547 TrrapQ80YV3 2565 aaKnown RBP9.67□□□□□ -0.86
Col1a1-201ENSMUST00000001547 Gm21886J3QJU9 214 aa9.66□□□□□ -0.86
Col1a1-201ENSMUST00000001547 E130208F15RikQ3UPV3 143 aa9.66□□□□□ -0.86
Col1a1-201ENSMUST00000001547 Gm3250E9Q1M3 230 aa9.66□□□□□ -0.86
Col1a1-201ENSMUST00000001547 Gm20661K7N787 53 aa9.66□□□□□ -0.86
Col1a1-201ENSMUST00000001547 Ighv2-5A0A0A6YY69 116 aa9.66□□□□□ -0.86
Col1a1-201ENSMUST00000001547 Gm26661M0QWV4 156 aa9.64□□□□□ -0.87
Col1a1-201ENSMUST00000001547 2310034G01RikA0A286YDL3 209 aa9.64□□□□□ -0.87
Col1a1-201ENSMUST00000001547 Prol1E9PYQ4 312 aa9.63□□□□□ -0.87
Col1a1-201ENSMUST00000001547 Igkv8-27A0A0G2JF28 120 aa9.63□□□□□ -0.87
Col1a1-201ENSMUST00000001547 AI606181Q8C7B9 129 aa9.61□□□□□ -0.87
Col1a1-201ENSMUST00000001547 Gm11627A6PWP4 55 aa9.61□□□□□ -0.87
Col1a1-201ENSMUST00000001547 Rps28P62858 69 aaKnown RBP9.61□□□□□ -0.87
Col1a1-201ENSMUST00000001547 Snhg11Q4G0K9 87 aa9.61□□□□□ -0.87
Col1a1-201ENSMUST00000001547 Gm44790A0A0N4SV91 103 aa9.61□□□□□ -0.87
Col1a1-201ENSMUST00000001547 Defb1P56386 69 aa9.6□□□□□ -0.87
Col1a1-201ENSMUST00000001547 Ighv2-2A0A075B5P8 116 aa9.6□□□□□ -0.87
Col1a1-201ENSMUST00000001547 P01821 116 aa9.6□□□□□ -0.87
Col1a1-201ENSMUST00000001547 Znf414Q9DCK4 299 aa9.59□□□□□ -0.87
Col1a1-201ENSMUST00000001547 Krtap16-1A2A5X5 502 aa9.59□□□□□ -0.87
Col1a1-201ENSMUST00000001547 Defb11Q8R2I7 77 aa9.59□□□□□ -0.87
Col1a1-201ENSMUST00000001547 Q8BGJ3 129 aa9.57□□□□□ -0.88
Col1a1-201ENSMUST00000001547 4930507D05RikQ8C9C9 103 aa9.57□□□□□ -0.88
Col1a1-201ENSMUST00000001547 Gm10772F7AIG4 85 aa9.57□□□□□ -0.88
Col1a1-201ENSMUST00000001547 Bahcc1Q3UHR0 2643 aa9.57□□□□□ -0.88
Col1a1-201ENSMUST00000001547 Dmac1Q9CQ00 111 aa9.56□□□□□ -0.88
Col1a1-201ENSMUST00000001547 Psors1c2Q80ZC9 134 aa9.55□□□□□ -0.88
Col1a1-201ENSMUST00000001547 Spata3Q9D9T6 193 aa9.55□□□□□ -0.88
Col1a1-201ENSMUST00000001547 Gm9903Q8C9Y8 129 aa9.55□□□□□ -0.88
Col1a1-201ENSMUST00000001547 Elof1P60003 83 aa9.55□□□□□ -0.88
Col1a1-201ENSMUST00000001547 AI854703Q8BIN3 203 aa9.53□□□□□ -0.88
Col1a1-201ENSMUST00000001547 Zfp462B1AWL2 2495 aaKnown RBP9.53□□□□□ -0.88
Col1a1-201ENSMUST00000001547 Rpl37aP61514 92 aa9.53□□□□□ -0.88
Col1a1-201ENSMUST00000001547 Gpr15lA0A0B4J1N3 78 aa9.52□□□□□ -0.88
Col1a1-201ENSMUST00000001547 Hcfc1Q61191 2045 aaKnown RBP9.52□□□□□ -0.89
Col1a1-201ENSMUST00000001547 MtorQ9JLN9 2549 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 75.8 ms