RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Rhox8Q6VSS7 320 aa25.09■■□□□ 1.61
Col1a1-201ENSMUST00000001547 Rpgrip1Q9EPQ2 1331 aa22.54■■□□□ 1.2
Col1a1-201ENSMUST00000001547 Ehmt2Q9Z148 1263 aaKnown RBP22.39■■□□□ 1.17
Col1a1-201ENSMUST00000001547 Ccdc136Q3TVA9 1136 aa22.37■■□□□ 1.17
Col1a1-201ENSMUST00000001547 NischQ80TM9 1593 aa22.36■■□□□ 1.17
Col1a1-201ENSMUST00000001547 Cngb1E1AZ71 1325 aa22.17■■□□□ 1.14
Col1a1-201ENSMUST00000001547 Esf1Q3V1V3 845 aaKnown RBP22.16■■□□□ 1.14
Col1a1-201ENSMUST00000001547 Las1lA2BE28 776 aaKnown RBP22.04■■□□□ 1.12
Col1a1-201ENSMUST00000001547 Trim41Q5NCC3 630 aa21.89■■□□□ 1.09
Col1a1-201ENSMUST00000001547 Pelp1Q9DBD5 1123 aaKnown RBP21.83■■□□□ 1.09
Col1a1-201ENSMUST00000001547 Gab3Q8BSM5 595 aa21.82■■□□□ 1.08
Col1a1-201ENSMUST00000001547 Wdr66E9Q743 1299 aa21.74■■□□□ 1.07
Col1a1-201ENSMUST00000001547 Zeb1Q64318 1117 aa21.65■■□□□ 1.06
Col1a1-201ENSMUST00000001547 Npm2Q80W85 207 aa21.63■■□□□ 1.05
Col1a1-201ENSMUST00000001547 Ube2uB1AUC4 352 aa21.56■■□□□ 1.04
Col1a1-201ENSMUST00000001547 Myt1lP97500 1187 aa21.46■■□□□ 1.03
Col1a1-201ENSMUST00000001547 Amer1Q7TS75 1132 aa21.33■■□□□ 1
Col1a1-201ENSMUST00000001547 Ccdc180J3QNE4 1664 aa21.06■□□□□ 0.96
Col1a1-201ENSMUST00000001547 Acin1Q9JIX8 1338 aaKnown RBP21.06■□□□□ 0.96
Col1a1-201ENSMUST00000001547 UbtfP25976 765 aaKnown RBP21■□□□□ 0.95
Col1a1-201ENSMUST00000001547 CenpbP27790 599 aa20.96■□□□□ 0.95
Col1a1-201ENSMUST00000001547 NefmP08553 848 aa20.92■□□□□ 0.94
Col1a1-201ENSMUST00000001547 HrcG5E8J6 738 aa20.91■□□□□ 0.94
Col1a1-201ENSMUST00000001547 Rtl1Q7M732 1744 aa20.87■□□□□ 0.93
Col1a1-201ENSMUST00000001547 Abcc9P70170 1546 aa20.84■□□□□ 0.93
Col1a1-201ENSMUST00000001547 Il27Q8K3I6 234 aa20.82■□□□□ 0.92
Col1a1-201ENSMUST00000001547 Zcchc6Q5BLK4 1491 aaKnown RBP20.8■□□□□ 0.92
Col1a1-201ENSMUST00000001547 Gm35339A0A140LHH9 1649 aa20.61■□□□□ 0.89
Col1a1-201ENSMUST00000001547 4930567H17RikQ3V0K5 233 aa20.59■□□□□ 0.89
Col1a1-201ENSMUST00000001547 Slc24a1Q91WD8 1130 aa20.59■□□□□ 0.89
Col1a1-201ENSMUST00000001547 Stra8P70278 393 aa20.52■□□□□ 0.88
Col1a1-201ENSMUST00000001547 Ttbk1Q6PCN3 1308 aa20.48■□□□□ 0.87
Col1a1-201ENSMUST00000001547 Ap3b1Q9Z1T1 1105 aa20.47■□□□□ 0.87
Col1a1-201ENSMUST00000001547 Abcc8B2RUS7 1588 aa20.38■□□□□ 0.85
Col1a1-201ENSMUST00000001547 Fam50aQ9WV03 339 aaKnown RBP20.37■□□□□ 0.85
Col1a1-201ENSMUST00000001547 4933416C03RikQ3V063 378 aa20.31■□□□□ 0.84
Col1a1-201ENSMUST00000001547 Cdk11bP24788 784 aaKnown RBP20.25■□□□□ 0.83
Col1a1-201ENSMUST00000001547 Pcgf6Q99NA9 353 aa20.21■□□□□ 0.83
Col1a1-201ENSMUST00000001547 Neurod1Q60867 357 aa20.19■□□□□ 0.82
Col1a1-201ENSMUST00000001547 NclP09405 707 aaKnown RBP20.18■□□□□ 0.82
Col1a1-201ENSMUST00000001547 NrdcQ8BHG1 1161 aa20.07■□□□□ 0.8
Col1a1-201ENSMUST00000001547 TonslQ6NZL6 1363 aa20.05■□□□□ 0.8
Col1a1-201ENSMUST00000001547 Anp32bQ9EST5 272 aaKnown RBP20.04■□□□□ 0.8
Col1a1-201ENSMUST00000001547 Nop58Q6DFW4 536 aaKnown RBP20.04■□□□□ 0.8
Col1a1-201ENSMUST00000001547 Ppargc1bQ8VHJ7 1014 aa20.04■□□□□ 0.8
Col1a1-201ENSMUST00000001547 Myt1Q8CFC2 1127 aa20.04■□□□□ 0.8
Col1a1-201ENSMUST00000001547 Mier1Q5UAK0 511 aa20.01■□□□□ 0.79
Col1a1-201ENSMUST00000001547 Npm1Q61937 292 aaKnown RBP20.01■□□□□ 0.79
Col1a1-201ENSMUST00000001547 Os9Q8K2C7 672 aa19.99■□□□□ 0.79
Col1a1-201ENSMUST00000001547 NeflP08551 543 aa19.94■□□□□ 0.78
Col1a1-201ENSMUST00000001547 Supt5hO55201 1082 aaKnown RBP19.94■□□□□ 0.78
Col1a1-201ENSMUST00000001547 Tnnt3Q9QZ47 272 aa19.94■□□□□ 0.78
Col1a1-201ENSMUST00000001547 Eif5bQ05D44 1216 aaKnown RBP19.91■□□□□ 0.78
Col1a1-201ENSMUST00000001547 Lmod2Q3UHZ5 550 aa19.89■□□□□ 0.77
Col1a1-201ENSMUST00000001547 Plekhg3Q4VAC9 1341 aa19.87■□□□□ 0.77
Col1a1-201ENSMUST00000001547 Brd4Q9ESU6 1400 aaKnown RBP19.82■□□□□ 0.76
Col1a1-201ENSMUST00000001547 Zbtb7cQ8VCZ7 619 aa19.73■□□□□ 0.75
Col1a1-201ENSMUST00000001547 Rb1cc1Q9ESK9 1588 aa19.71■□□□□ 0.75
Col1a1-201ENSMUST00000001547 Chic1Q8CBW7 227 aa19.63■□□□□ 0.73
Col1a1-201ENSMUST00000001547 Hnrnpul2Q00PI9 745 aaKnown RBP19.62■□□□□ 0.73
Col1a1-201ENSMUST00000001547 Cep164Q5DU05 1446 aa19.61■□□□□ 0.73
Col1a1-201ENSMUST00000001547 ClspnQ80YR7 1315 aa19.58■□□□□ 0.73
Col1a1-201ENSMUST00000001547 Dcaf1Q80TR8 1506 aa19.57■□□□□ 0.72
Col1a1-201ENSMUST00000001547 Clip1Q922J3 1391 aa19.57■□□□□ 0.72
Col1a1-201ENSMUST00000001547 Rtl5Q5DTT4 599 aa19.55■□□□□ 0.72
Col1a1-201ENSMUST00000001547 Ifnlr1Q8CGK5 535 aa19.55■□□□□ 0.72
Col1a1-201ENSMUST00000001547 Eid3Q3V124 375 aa19.45■□□□□ 0.7
Col1a1-201ENSMUST00000001547 Gm13697A2AK42 830 aa19.43■□□□□ 0.7
Col1a1-201ENSMUST00000001547 Ubl4bQ9CQ84 188 aa19.43■□□□□ 0.7
Col1a1-201ENSMUST00000001547 Erich6D3Z6S9 713 aa19.41■□□□□ 0.7
Col1a1-201ENSMUST00000001547 Zbtb4Q5F293 982 aa19.41■□□□□ 0.7
Col1a1-201ENSMUST00000001547 Fkbp15Q6P9Q6 1216 aaKnown RBP19.4■□□□□ 0.7
Col1a1-201ENSMUST00000001547 NacadQ5SWP3 1504 aa19.37■□□□□ 0.69
Col1a1-201ENSMUST00000001547 DaxxO35613 739 aa19.37■□□□□ 0.69
Col1a1-201ENSMUST00000001547 DiexfQ8BTT6 772 aaKnown RBP19.36■□□□□ 0.69
Col1a1-201ENSMUST00000001547 Mapk8ip2Q9ERE9 830 aa19.36■□□□□ 0.69
Col1a1-201ENSMUST00000001547 Atp1b4Q99ME6 356 aa19.3■□□□□ 0.68
Col1a1-201ENSMUST00000001547 Ccer2J3QPU5 274 aa19.27■□□□□ 0.68
Col1a1-201ENSMUST00000001547 Nlrp6Q91WS2 869 aa19.26■□□□□ 0.67
Col1a1-201ENSMUST00000001547 Hdac5Q9Z2V6 1113 aa19.25■□□□□ 0.67
Col1a1-201ENSMUST00000001547 Sall2Q9QX96 1004 aa19.24■□□□□ 0.67
Col1a1-201ENSMUST00000001547 Baz1aO88379 1555 aa19.21■□□□□ 0.67
Col1a1-201ENSMUST00000001547 Anp32aO35381 247 aa19.2■□□□□ 0.66
Col1a1-201ENSMUST00000001547 Prdm10Q3UTQ7 1184 aa19.2■□□□□ 0.66
Col1a1-201ENSMUST00000001547 Chic2Q9D9G3 165 aa19.16■□□□□ 0.66
Col1a1-201ENSMUST00000001547 BlmO88700 1416 aa19.16■□□□□ 0.66
Col1a1-201ENSMUST00000001547 Gm13695A2AK44 830 aa19.11■□□□□ 0.65
Col1a1-201ENSMUST00000001547 Golga3P55937 1487 aa19.09■□□□□ 0.65
Col1a1-201ENSMUST00000001547 Polr3glQ8R0C0 218 aa19.07■□□□□ 0.64
Col1a1-201ENSMUST00000001547 Setd5Q5XJV7 1441 aa19.07■□□□□ 0.64
Col1a1-201ENSMUST00000001547 ArxO35085 564 aa19.06■□□□□ 0.64
Col1a1-201ENSMUST00000001547 Kif15Q6P9L6 1387 aa19.02■□□□□ 0.64
Col1a1-201ENSMUST00000001547 Rsf1E9PWW9 1441 aaKnown RBP19.01■□□□□ 0.63
Col1a1-201ENSMUST00000001547 Anks4bQ8K3X6 423 aa18.99■□□□□ 0.63
Col1a1-201ENSMUST00000001547 CatipB9EKE5 520 aa18.98■□□□□ 0.63
Col1a1-201ENSMUST00000001547 Plppr3Q7TPB0 716 aa18.95■□□□□ 0.62
Col1a1-201ENSMUST00000001547 Gm38655A0A286YDK6 273 aa18.95■□□□□ 0.62
Col1a1-201ENSMUST00000001547 Clstn2Q9ER65 966 aa18.95■□□□□ 0.62
Col1a1-201ENSMUST00000001547 Kdm5dQ62240 1548 aa18.92■□□□□ 0.62
Col1a1-201ENSMUST00000001547 Ercc6F8VPZ5 1481 aa18.92■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms