RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Col7a1Q63870 2944 aa8.59□□□□□ -1.03
Herc4-208ENSMUST00000219577 Igkv6-13A0A0G2JGY3 119 aa8.58□□□□□ -1.04
Herc4-208ENSMUST00000219577 PrcdQ00LT2 53 aa8.58□□□□□ -1.04
Herc4-208ENSMUST00000219577 Plac8l1Q08EJ0 177 aa8.58□□□□□ -1.04
Herc4-208ENSMUST00000219577 Sostdc1Q9CQN4 206 aa8.58□□□□□ -1.04
Herc4-208ENSMUST00000219577 Lypd5Q9D7Z7 256 aa8.58□□□□□ -1.04
Herc4-208ENSMUST00000219577 SbsponQ3UPR9 264 aa8.58□□□□□ -1.04
Herc4-208ENSMUST00000219577 Atp6v0e2Q91XE7 81 aa8.57□□□□□ -1.04
Herc4-208ENSMUST00000219577 Ly6gP35461 111 aa8.57□□□□□ -1.04
Herc4-208ENSMUST00000219577 PemtQ61907 199 aa8.57□□□□□ -1.04
Herc4-208ENSMUST00000219577 4930442H23RikQ9D5G7 103 aa8.57□□□□□ -1.04
Herc4-208ENSMUST00000219577 Defa2P28309 93 aa8.56□□□□□ -1.04
Herc4-208ENSMUST00000219577 Morn3Q8C5T4 241 aa8.56□□□□□ -1.04
Herc4-208ENSMUST00000219577 Tfpi2O35536 230 aa8.56□□□□□ -1.04
Herc4-208ENSMUST00000219577 Defa4P28311 92 aa8.56□□□□□ -1.04
Herc4-208ENSMUST00000219577 CenpwQ3URR0 86 aa8.56□□□□□ -1.04
Herc4-208ENSMUST00000219577 1700010B08RikQ9DAI7 102 aa8.56□□□□□ -1.04
Herc4-208ENSMUST00000219577 Cox8cA6H666 72 aa8.55□□□□□ -1.04
Herc4-208ENSMUST00000219577 Lyrm9Q3UN90 78 aa8.55□□□□□ -1.04
Herc4-208ENSMUST00000219577 ApcQ61315 2845 aa8.54□□□□□ -1.04
Herc4-208ENSMUST00000219577 Higd2aQ9CQJ1 106 aa8.54□□□□□ -1.04
Herc4-208ENSMUST00000219577 E130218I03RikA0A0U1RNU5 63 aa8.54□□□□□ -1.04
Herc4-208ENSMUST00000219577 Foxc1Q61572 553 aa8.54□□□□□ -1.04
Herc4-208ENSMUST00000219577 Tm2d2Q8R0I4 213 aa8.54□□□□□ -1.04
Herc4-208ENSMUST00000219577 Wfdc12Q9JHY3 85 aa8.54□□□□□ -1.04
Herc4-208ENSMUST00000219577 Gm17472A0A075B683 117 aa8.54□□□□□ -1.04
Herc4-208ENSMUST00000219577 Q8R092 253 aa8.54□□□□□ -1.04
Herc4-208ENSMUST00000219577 Igkv8-16A0A0G2JDG9 121 aa8.53□□□□□ -1.04
Herc4-208ENSMUST00000219577 Cd99Q8VCN6 175 aa8.53□□□□□ -1.04
Herc4-208ENSMUST00000219577 Klk12B2RVZ0 247 aa8.53□□□□□ -1.04
Herc4-208ENSMUST00000219577 Ppp1r32Q148A4 427 aa8.53□□□□□ -1.04
Herc4-208ENSMUST00000219577 Hbb-b2P02089 147 aa8.53□□□□□ -1.04
Herc4-208ENSMUST00000219577 Itpr2Q9Z329 2701 aa8.53□□□□□ -1.04
Herc4-208ENSMUST00000219577 Erdr1J3QMM0 206 aa8.52□□□□□ -1.04
Herc4-208ENSMUST00000219577 Ighv13-2A0A0A6YWN3 119 aa8.52□□□□□ -1.05
Herc4-208ENSMUST00000219577 Igkv8-24A0A140T8P5 121 aa8.52□□□□□ -1.05
Herc4-208ENSMUST00000219577 MifP34884 115 aaKnown RBP8.52□□□□□ -1.05
Herc4-208ENSMUST00000219577 Dad1P61804 113 aa8.52□□□□□ -1.05
Herc4-208ENSMUST00000219577 4930535I16RikQ9CUI2 172 aa8.52□□□□□ -1.05
Herc4-208ENSMUST00000219577 A0A286YCN5 57 aa8.52□□□□□ -1.05
Herc4-208ENSMUST00000219577 GfyJ3KML8 504 aa8.52□□□□□ -1.05
Herc4-208ENSMUST00000219577 Cops9Q3U898 57 aa8.52□□□□□ -1.05
Herc4-208ENSMUST00000219577 HrnrQ8VHD8 2496 aa8.52□□□□□ -1.05
Herc4-208ENSMUST00000219577 Trav14d-3-dv8A0A075B619 120 aa8.51□□□□□ -1.05
Herc4-208ENSMUST00000219577 Igkv4-54A0A0G2JES9 117 aa8.51□□□□□ -1.05
Herc4-208ENSMUST00000219577 TeppQ6IMH0 216 aa8.51□□□□□ -1.05
Herc4-208ENSMUST00000219577 Igkv2-109A0A075B5K6 120 aa8.51□□□□□ -1.05
Herc4-208ENSMUST00000219577 Trav4d-3A0A075B625 110 aa8.5□□□□□ -1.05
Herc4-208ENSMUST00000219577 Fxyd5P97808 178 aa8.5□□□□□ -1.05
Herc4-208ENSMUST00000219577 PkigO70139 76 aa8.5□□□□□ -1.05
Herc4-208ENSMUST00000219577 Zfp951A0A087WRH0 451 aa8.5□□□□□ -1.05
Herc4-208ENSMUST00000219577 Tmem86bQ497J1 226 aa8.5□□□□□ -1.05
Herc4-208ENSMUST00000219577 Igkv4-53A0A0G2JFC6 119 aa8.49□□□□□ -1.05
Herc4-208ENSMUST00000219577 Trav4-3A0A0B4J1K1 110 aa8.49□□□□□ -1.05
Herc4-208ENSMUST00000219577 Igkv1-117A0A140T8M0 119 aa8.49□□□□□ -1.05
Herc4-208ENSMUST00000219577 Defa25Q5G864 92 aa8.49□□□□□ -1.05
Herc4-208ENSMUST00000219577 Gm16381A0A1Y7VKT9 73 aa8.48□□□□□ -1.05
Herc4-208ENSMUST00000219577 Lage3Q9CR70 148 aa8.48□□□□□ -1.05
Herc4-208ENSMUST00000219577 Timm17bQ9Z0V7 172 aa8.48□□□□□ -1.05
Herc4-208ENSMUST00000219577 Gm867A0A1W2P7T4 151 aa8.48□□□□□ -1.05
Herc4-208ENSMUST00000219577 Reg3dQ9QUS9 175 aa8.48□□□□□ -1.05
Herc4-208ENSMUST00000219577 Gm10518F6UQQ9 182 aa8.48□□□□□ -1.05
Herc4-208ENSMUST00000219577 Igkv3-1A0A075B5P1 119 aa8.47□□□□□ -1.05
Herc4-208ENSMUST00000219577 4930546C10RikE9Q4Y3 121 aa8.47□□□□□ -1.05
Herc4-208ENSMUST00000219577 Smr3aQ61900 147 aa8.47□□□□□ -1.05
Herc4-208ENSMUST00000219577 5730596B20RikQ8BQ08 205 aa8.47□□□□□ -1.05
Herc4-208ENSMUST00000219577 Gm20726G3UX18 150 aa8.47□□□□□ -1.05
Herc4-208ENSMUST00000219577 Trav9n-4A0A075B631 113 aa8.47□□□□□ -1.05
Herc4-208ENSMUST00000219577 Defa7P50705 93 aa8.47□□□□□ -1.05
Herc4-208ENSMUST00000219577 MplkipQ9D011 178 aa8.47□□□□□ -1.05
Herc4-208ENSMUST00000219577 Ighv8-11A0A075B5X4 119 aa8.46□□□□□ -1.05
Herc4-208ENSMUST00000219577 CrygaP04345 174 aa8.46□□□□□ -1.05
Herc4-208ENSMUST00000219577 Rnf152Q8BG47 203 aa8.46□□□□□ -1.05
Herc4-208ENSMUST00000219577 Krtap24-1G3X9A2 248 aa8.46□□□□□ -1.06
Herc4-208ENSMUST00000219577 Esm1Q9QYY7 184 aa8.46□□□□□ -1.06
Herc4-208ENSMUST00000219577 Tenm1Q9WTS4 2731 aa8.46□□□□□ -1.06
Herc4-208ENSMUST00000219577 Igkv3-9A0A140T8P4 119 aa8.46□□□□□ -1.06
Herc4-208ENSMUST00000219577 Hist1h4aP62806 103 aaKnown RBP8.46□□□□□ -1.06
Herc4-208ENSMUST00000219577 Gm10772F7AIG4 85 aa8.45□□□□□ -1.06
Herc4-208ENSMUST00000219577 Eif4ebp1Q60876 117 aa8.45□□□□□ -1.06
Herc4-208ENSMUST00000219577 Gpha2Q925Q5 128 aa8.44□□□□□ -1.06
Herc4-208ENSMUST00000219577 Smrp1Q2MH31 260 aa8.44□□□□□ -1.06
Herc4-208ENSMUST00000219577 9430069I07RikQ9CX21 111 aa8.44□□□□□ -1.06
Herc4-208ENSMUST00000219577 Pkd1l1Q8R526 2615 aa8.44□□□□□ -1.06
Herc4-208ENSMUST00000219577 D730001G18RikA0A087WQU7 115 aa8.44□□□□□ -1.06
Herc4-208ENSMUST00000219577 Hspg2Q05793 3707 aaKnown RBP8.43□□□□□ -1.06
Herc4-208ENSMUST00000219577 Igkv4-72A0A0B4J1I4 117 aa8.43□□□□□ -1.06
Herc4-208ENSMUST00000219577 Ighv1-61P01749 117 aa8.43□□□□□ -1.06
Herc4-208ENSMUST00000219577 CrygfQ9CXV3 174 aa8.43□□□□□ -1.06
Herc4-208ENSMUST00000219577 Trbv13-2A0A140T8N6 113 aa8.42□□□□□ -1.06
Herc4-208ENSMUST00000219577 Chchd7Q8K2Q5 85 aa8.42□□□□□ -1.06
Herc4-208ENSMUST00000219577 Rpl39lQ9CQD0 51 aa8.42□□□□□ -1.06
Herc4-208ENSMUST00000219577 Ss18l2Q9D174 77 aa8.42□□□□□ -1.06
Herc4-208ENSMUST00000219577 Igkv1-88A0A140T8N1 120 aa8.41□□□□□ -1.06
Herc4-208ENSMUST00000219577 Srrm2Q8BTI8 2703 aaKnown RBP8.41□□□□□ -1.06
Herc4-208ENSMUST00000219577 Xcl1P47993 114 aa8.41□□□□□ -1.06
Herc4-208ENSMUST00000219577 BsnO88737 3942 aa8.41□□□□□ -1.06
Herc4-208ENSMUST00000219577 Sslp1Q3UN54 99 aa8.41□□□□□ -1.06
Herc4-208ENSMUST00000219577 4930524J08RikQ9CUJ5 163 aa8.41□□□□□ -1.06
Herc4-208ENSMUST00000219577 Tenm4Q3UHK6 2771 aa8.41□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms