RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Rhox8Q6VSS7 320 aa22■■□□□ 1.11
Herc4-208ENSMUST00000219577 NischQ80TM9 1593 aa21.93■■□□□ 1.1
Herc4-208ENSMUST00000219577 Abcc9P70170 1546 aa20.98■□□□□ 0.95
Herc4-208ENSMUST00000219577 Abcc8B2RUS7 1588 aa20.56■□□□□ 0.88
Herc4-208ENSMUST00000219577 Gm35339A0A140LHH9 1649 aa20.53■□□□□ 0.88
Herc4-208ENSMUST00000219577 Ehmt2Q9Z148 1263 aaKnown RBP20.43■□□□□ 0.86
Herc4-208ENSMUST00000219577 Ccdc136Q3TVA9 1136 aa20.32■□□□□ 0.84
Herc4-208ENSMUST00000219577 Ccdc180J3QNE4 1664 aa19.85■□□□□ 0.77
Herc4-208ENSMUST00000219577 Rtl1Q7M732 1744 aa19.79■□□□□ 0.76
Herc4-208ENSMUST00000219577 Trim41Q5NCC3 630 aa19.62■□□□□ 0.73
Herc4-208ENSMUST00000219577 Rpgrip1Q9EPQ2 1331 aa19.58■□□□□ 0.73
Herc4-208ENSMUST00000219577 Gab3Q8BSM5 595 aa19.45■□□□□ 0.7
Herc4-208ENSMUST00000219577 Acin1Q9JIX8 1338 aaKnown RBP19.44■□□□□ 0.7
Herc4-208ENSMUST00000219577 Cngb1E1AZ71 1325 aa19.42■□□□□ 0.7
Herc4-208ENSMUST00000219577 HrcG5E8J6 738 aa19.35■□□□□ 0.69
Herc4-208ENSMUST00000219577 Zcchc6Q5BLK4 1491 aaKnown RBP19.32■□□□□ 0.68
Herc4-208ENSMUST00000219577 Rb1cc1Q9ESK9 1588 aa19.24■□□□□ 0.67
Herc4-208ENSMUST00000219577 Dcaf1Q80TR8 1506 aa19.12■□□□□ 0.65
Herc4-208ENSMUST00000219577 Esf1Q3V1V3 845 aaKnown RBP19.08■□□□□ 0.65
Herc4-208ENSMUST00000219577 ScribQ80U72 1612 aa19■□□□□ 0.63
Herc4-208ENSMUST00000219577 Zeb1Q64318 1117 aa19■□□□□ 0.63
Herc4-208ENSMUST00000219577 Pcgf6Q99NA9 353 aa18.97■□□□□ 0.63
Herc4-208ENSMUST00000219577 Kdm5dQ62240 1548 aa18.92■□□□□ 0.62
Herc4-208ENSMUST00000219577 Chic1Q8CBW7 227 aa18.91■□□□□ 0.62
Herc4-208ENSMUST00000219577 Baz1aO88379 1555 aa18.85■□□□□ 0.61
Herc4-208ENSMUST00000219577 Supt5hO55201 1082 aaKnown RBP18.78■□□□□ 0.6
Herc4-208ENSMUST00000219577 Myt1lP97500 1187 aa18.74■□□□□ 0.59
Herc4-208ENSMUST00000219577 NacadQ5SWP3 1504 aa18.7■□□□□ 0.58
Herc4-208ENSMUST00000219577 UbtfP25976 765 aaKnown RBP18.66■□□□□ 0.58
Herc4-208ENSMUST00000219577 Cep164Q5DU05 1446 aa18.61■□□□□ 0.57
Herc4-208ENSMUST00000219577 Mier1Q5UAK0 511 aa18.54■□□□□ 0.56
Herc4-208ENSMUST00000219577 Ppargc1bQ8VHJ7 1014 aa18.53■□□□□ 0.56
Herc4-208ENSMUST00000219577 Wdr66E9Q743 1299 aa18.52■□□□□ 0.56
Herc4-208ENSMUST00000219577 Rsf1E9PWW9 1441 aaKnown RBP18.51■□□□□ 0.55
Herc4-208ENSMUST00000219577 Npm2Q80W85 207 aa18.5■□□□□ 0.55
Herc4-208ENSMUST00000219577 Ccdc88bQ4QRL3 1481 aa18.38■□□□□ 0.53
Herc4-208ENSMUST00000219577 Brd4Q9ESU6 1400 aaKnown RBP18.37■□□□□ 0.53
Herc4-208ENSMUST00000219577 Cecr2E9Q2Z1 1453 aa18.35■□□□□ 0.53
Herc4-208ENSMUST00000219577 NefmP08553 848 aa18.33■□□□□ 0.52
Herc4-208ENSMUST00000219577 Smarca2Q6DIC0 1577 aa18.32■□□□□ 0.52
Herc4-208ENSMUST00000219577 Il27Q8K3I6 234 aa18.3■□□□□ 0.52
Herc4-208ENSMUST00000219577 Las1lA2BE28 776 aaKnown RBP18.26■□□□□ 0.51
Herc4-208ENSMUST00000219577 Sycp2Q9CUU3 1500 aa18.24■□□□□ 0.51
Herc4-208ENSMUST00000219577 Sall2Q9QX96 1004 aa18.23■□□□□ 0.51
Herc4-208ENSMUST00000219577 Neurod1Q60867 357 aa18.22■□□□□ 0.51
Herc4-208ENSMUST00000219577 Ap3b1Q9Z1T1 1105 aa18.21■□□□□ 0.51
Herc4-208ENSMUST00000219577 Golga3P55937 1487 aa18.2■□□□□ 0.5
Herc4-208ENSMUST00000219577 Plekhg3Q4VAC9 1341 aa18.18■□□□□ 0.5
Herc4-208ENSMUST00000219577 Crybg2B7ZCC2 1516 aa18.08■□□□□ 0.49
Herc4-208ENSMUST00000219577 Synj1Q8CHC4 1574 aa18.04■□□□□ 0.48
Herc4-208ENSMUST00000219577 Aebp2Q9Z248 504 aaKnown RBP18.01■□□□□ 0.47
Herc4-208ENSMUST00000219577 Eid3Q3V124 375 aa17.94■□□□□ 0.46
Herc4-208ENSMUST00000219577 CftrP26361 1476 aa17.94■□□□□ 0.46
Herc4-208ENSMUST00000219577 TonslQ6NZL6 1363 aa17.84■□□□□ 0.45
Herc4-208ENSMUST00000219577 Clip1Q922J3 1391 aa17.84■□□□□ 0.45
Herc4-208ENSMUST00000219577 Nop58Q6DFW4 536 aaKnown RBP17.83■□□□□ 0.44
Herc4-208ENSMUST00000219577 Mapk8ip2Q9ERE9 830 aa17.82■□□□□ 0.44
Herc4-208ENSMUST00000219577 Cdk11bP24788 784 aaKnown RBP17.81■□□□□ 0.44
Herc4-208ENSMUST00000219577 Fam50aQ9WV03 339 aaKnown RBP17.79■□□□□ 0.44
Herc4-208ENSMUST00000219577 Ube2uB1AUC4 352 aa17.78■□□□□ 0.44
Herc4-208ENSMUST00000219577 Lmod2Q3UHZ5 550 aa17.78■□□□□ 0.44
Herc4-208ENSMUST00000219577 Gm38655A0A286YDK6 273 aa17.76■□□□□ 0.43
Herc4-208ENSMUST00000219577 BicraF8VPZ9 1578 aa17.76■□□□□ 0.43
Herc4-208ENSMUST00000219577 Csrnp3P59055 597 aa17.75■□□□□ 0.43
Herc4-208ENSMUST00000219577 Rapgef2Q8CHG7 1496 aa17.68■□□□□ 0.42
Herc4-208ENSMUST00000219577 ClspnQ80YR7 1315 aa17.68■□□□□ 0.42
Herc4-208ENSMUST00000219577 Cep162Q6ZQ06 1403 aa17.67■□□□□ 0.42
Herc4-208ENSMUST00000219577 Cc2d2aQ8CFW7 1633 aa17.64■□□□□ 0.41
Herc4-208ENSMUST00000219577 Fmn1Q05860 1466 aa17.57■□□□□ 0.4
Herc4-208ENSMUST00000219577 Slc24a1Q91WD8 1130 aa17.55■□□□□ 0.4
Herc4-208ENSMUST00000219577 Cttnbp2B9EJA2 1648 aa17.55■□□□□ 0.4
Herc4-208ENSMUST00000219577 Anks4bQ8K3X6 423 aa17.53■□□□□ 0.4
Herc4-208ENSMUST00000219577 NclP09405 707 aaKnown RBP17.53■□□□□ 0.4
Herc4-208ENSMUST00000219577 Smarca4Q3TKT4 1613 aaKnown RBP17.53■□□□□ 0.4
Herc4-208ENSMUST00000219577 Kif15Q6P9L6 1387 aa17.5■□□□□ 0.39
Herc4-208ENSMUST00000219577 Setd5Q5XJV7 1441 aa17.49■□□□□ 0.39
Herc4-208ENSMUST00000219577 1700123L14RikQ3V2K7 440 aa17.48■□□□□ 0.39
Herc4-208ENSMUST00000219577 Npm1Q61937 292 aaKnown RBP17.46■□□□□ 0.39
Herc4-208ENSMUST00000219577 Top2bQ64511 1612 aa17.45■□□□□ 0.38
Herc4-208ENSMUST00000219577 BlmO88700 1416 aa17.42■□□□□ 0.38
Herc4-208ENSMUST00000219577 Iqgap2Q3UQ44 1575 aa17.37■□□□□ 0.37
Herc4-208ENSMUST00000219577 Ubl4bQ9CQ84 188 aa17.37■□□□□ 0.37
Herc4-208ENSMUST00000219577 Top2aQ01320 1528 aaKnown RBP17.35■□□□□ 0.37
Herc4-208ENSMUST00000219577 Eea1Q8BL66 1411 aa17.35■□□□□ 0.37
Herc4-208ENSMUST00000219577 Chic2Q9D9G3 165 aa17.31■□□□□ 0.36
Herc4-208ENSMUST00000219577 PtprkP35822 1457 aa17.3■□□□□ 0.36
Herc4-208ENSMUST00000219577 CenpbP27790 599 aa17.29■□□□□ 0.36
Herc4-208ENSMUST00000219577 Atad2bE9Q166 1460 aaKnown RBP17.26■□□□□ 0.35
Herc4-208ENSMUST00000219577 Pds5bQ4VA53 1446 aaKnown RBP17.22■□□□□ 0.35
Herc4-208ENSMUST00000219577 Hspa5P20029 655 aaKnown RBP17.19■□□□□ 0.34
Herc4-208ENSMUST00000219577 SafbD3YXK2 937 aaKnown RBP17.19■□□□□ 0.34
Herc4-208ENSMUST00000219577 Arhgap35Q91YM2 1499 aa17.18■□□□□ 0.34
Herc4-208ENSMUST00000219577 Hnrnpul2Q00PI9 745 aaKnown RBP17.16■□□□□ 0.34
Herc4-208ENSMUST00000219577 Arap1Q4LDD4 1452 aa17.15■□□□□ 0.34
Herc4-208ENSMUST00000219577 Eif5bQ05D44 1216 aaKnown RBP17.14■□□□□ 0.33
Herc4-208ENSMUST00000219577 Baz1bQ9Z277 1479 aa17.12■□□□□ 0.33
Herc4-208ENSMUST00000219577 Ccdc18Q640L5 1455 aa17.1■□□□□ 0.33
Herc4-208ENSMUST00000219577 Zbtb7cQ8VCZ7 619 aa17.1■□□□□ 0.33
Herc4-208ENSMUST00000219577 Ercc6F8VPZ5 1481 aa17.1■□□□□ 0.33
Herc4-208ENSMUST00000219577 Ncapd3Q6ZQK0 1506 aa17.1■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 281 ms