RNA–Protein interactions for RNA: ENSMUST00000168878.7

Shroom3-204, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 5,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-204ENSMUST00000168878 Q9DAB9 146 aa12.29□□□□□ -0.44
Shroom3-204ENSMUST00000168878 Trav14-1A0A0G2JF94 121 aa12.28□□□□□ -0.44
Shroom3-204ENSMUST00000168878 Gm11011D3Z3L9 86 aa12.28□□□□□ -0.44
Shroom3-204ENSMUST00000168878 9230102O04RikA2ASX7 82 aa12.27□□□□□ -0.44
Shroom3-204ENSMUST00000168878 Alms1Q8K4E0 3251 aa12.27□□□□□ -0.44
Shroom3-204ENSMUST00000168878 Gpha2Q925Q5 128 aa12.27□□□□□ -0.45
Shroom3-204ENSMUST00000168878 SycnQ8VCK7 134 aa12.26□□□□□ -0.45
Shroom3-204ENSMUST00000168878 Trbv13-2A0A140T8N6 113 aa12.25□□□□□ -0.45
Shroom3-204ENSMUST00000168878 Tns1E9Q0S6 1888 aaKnown RBP12.25□□□□□ -0.45
Shroom3-204ENSMUST00000168878 P06329 120 aa12.25□□□□□ -0.45
Shroom3-204ENSMUST00000168878 Gm5142Q8C5X9 133 aa12.25□□□□□ -0.45
Shroom3-204ENSMUST00000168878 A930009A15RikG3UYI6 118 aa12.25□□□□□ -0.45
Shroom3-204ENSMUST00000168878 Smr3aQ61900 147 aa12.24□□□□□ -0.45
Shroom3-204ENSMUST00000168878 CrygfQ9CXV3 174 aa12.24□□□□□ -0.45
Shroom3-204ENSMUST00000168878 Pla2g1bQ9Z0Y2 146 aa12.24□□□□□ -0.45
Shroom3-204ENSMUST00000168878 Spink13Q3UTS8 97 aa12.24□□□□□ -0.45
Shroom3-204ENSMUST00000168878 Pcsk5Q04592 1877 aa12.23□□□□□ -0.45
Shroom3-204ENSMUST00000168878 Rtl10D3YWW5 146 aa12.23□□□□□ -0.45
Shroom3-204ENSMUST00000168878 4930432M17RikQ3V0W9 174 aa12.23□□□□□ -0.45
Shroom3-204ENSMUST00000168878 Sprr2jO70561 109 aa12.23□□□□□ -0.45
Shroom3-204ENSMUST00000168878 Gm10135F6TEE5 83 aa12.22□□□□□ -0.45
Shroom3-204ENSMUST00000168878 Gm10845Q3UNY9 185 aa12.21□□□□□ -0.45
Shroom3-204ENSMUST00000168878 Serp1Q9Z1W5 66 aa12.21□□□□□ -0.45
Shroom3-204ENSMUST00000168878 Zfyve26Q5DU37 2529 aa12.21□□□□□ -0.45
Shroom3-204ENSMUST00000168878 Ifitm6A0A1B0GS75 124 aa12.21□□□□□ -0.45
Shroom3-204ENSMUST00000168878 TeppQ6IMH0 216 aa12.21□□□□□ -0.45
Shroom3-204ENSMUST00000168878 Shisa2Q8QZV2 295 aa12.2□□□□□ -0.46
Shroom3-204ENSMUST00000168878 Znf706Q9D115 76 aaKnown RBP12.2□□□□□ -0.46
Shroom3-204ENSMUST00000168878 NbasE9Q411 2356 aa12.2□□□□□ -0.46
Shroom3-204ENSMUST00000168878 Gm3443F7CCV5 94 aa12.2□□□□□ -0.46
Shroom3-204ENSMUST00000168878 Nupr2Q497P3 102 aa12.2□□□□□ -0.46
Shroom3-204ENSMUST00000168878 2310009B15RikA0A0A6YWI4 143 aa12.19□□□□□ -0.46
Shroom3-204ENSMUST00000168878 Arhgap32Q811P8 2089 aa12.19□□□□□ -0.46
Shroom3-204ENSMUST00000168878 Gm10549Q3URY4 149 aa12.19□□□□□ -0.46
Shroom3-204ENSMUST00000168878 OtoglF7A4A7 2325 aa12.19□□□□□ -0.46
Shroom3-204ENSMUST00000168878 P84750 121 aa12.18□□□□□ -0.46
Shroom3-204ENSMUST00000168878 Wfdc13Q5DQQ6 81 aa12.18□□□□□ -0.46
Shroom3-204ENSMUST00000168878 BC025920Q3US60 128 aa12.17□□□□□ -0.46
Shroom3-204ENSMUST00000168878 AcacbE9Q4Z2 2448 aa12.17□□□□□ -0.46
Shroom3-204ENSMUST00000168878 Gm9767G3X930 207 aa12.17□□□□□ -0.46
Shroom3-204ENSMUST00000168878 Crip3Q6Q6R3 243 aa12.16□□□□□ -0.46
Shroom3-204ENSMUST00000168878 Prr9Q8BV84 116 aa12.16□□□□□ -0.46
Shroom3-204ENSMUST00000168878 Gm4707V9GXN5 68 aa12.16□□□□□ -0.46
Shroom3-204ENSMUST00000168878 Igkv3-12A0A140T8P0 119 aa12.15□□□□□ -0.46
Shroom3-204ENSMUST00000168878 Gm9573F7C950 1606 aa12.15□□□□□ -0.46
Shroom3-204ENSMUST00000168878 Psmb11Q8BG41 302 aa12.15□□□□□ -0.46
Shroom3-204ENSMUST00000168878 Igkv8-30A0A140T8M3 121 aa12.14□□□□□ -0.47
Shroom3-204ENSMUST00000168878 Gm5153P01627 120 aa12.14□□□□□ -0.47
Shroom3-204ENSMUST00000168878 Crip2Q9DCT8 208 aaKnown RBP12.14□□□□□ -0.47
Shroom3-204ENSMUST00000168878 Flg2Q2VIS4 2362 aa12.13□□□□□ -0.47
Shroom3-204ENSMUST00000168878 Cd164l2Q9D6W7 172 aa12.13□□□□□ -0.47
Shroom3-204ENSMUST00000168878 D730001G18RikA0A087WQU7 115 aa12.12□□□□□ -0.47
Shroom3-204ENSMUST00000168878 Col4a4Q9QZR9 1682 aa12.12□□□□□ -0.47
Shroom3-204ENSMUST00000168878 CrygeQ03740 174 aa12.11□□□□□ -0.47
Shroom3-204ENSMUST00000168878 Cdip1Q9DB75 208 aa12.11□□□□□ -0.47
Shroom3-204ENSMUST00000168878 UqcrqQ9CQ69 82 aa12.1□□□□□ -0.47
Shroom3-204ENSMUST00000168878 Gm17509Q9CZ61 145 aa12.1□□□□□ -0.47
Shroom3-204ENSMUST00000168878 1700074P13RikQ9D9G7 251 aa12.09□□□□□ -0.47
Shroom3-204ENSMUST00000168878 Gm10267M0QWD8 85 aa12.09□□□□□ -0.47
Shroom3-204ENSMUST00000168878 Lrp4Q8VI56 1905 aa12.08□□□□□ -0.47
Shroom3-204ENSMUST00000168878 Gm5464Q3UY29 175 aa12.08□□□□□ -0.48
Shroom3-204ENSMUST00000168878 Zfand2aQ9JII7 171 aa12.07□□□□□ -0.48
Shroom3-204ENSMUST00000168878 PtprbB2RU80 1998 aa12.06□□□□□ -0.48
Shroom3-204ENSMUST00000168878 BC067074F6RXI4 2391 aa12.06□□□□□ -0.48
Shroom3-204ENSMUST00000168878 Kiaa1549Q68FD9 1940 aa12.06□□□□□ -0.48
Shroom3-204ENSMUST00000168878 Ighv8-13A0A075B5Y0 101 aa12.06□□□□□ -0.48
Shroom3-204ENSMUST00000168878 Defb2P82020 71 aa12.06□□□□□ -0.48
Shroom3-204ENSMUST00000168878 Odf3l2Q3TZ65 277 aa12.05□□□□□ -0.48
Shroom3-204ENSMUST00000168878 H2al1mQ9DAD9 105 aa12.05□□□□□ -0.48
Shroom3-204ENSMUST00000168878 Myo9aQ8C170 2542 aa12.04□□□□□ -0.48
Shroom3-204ENSMUST00000168878 H2al1kJ3QP08 105 aa12.04□□□□□ -0.48
Shroom3-204ENSMUST00000168878 C2cd3Q52KB6 2323 aa12.03□□□□□ -0.48
Shroom3-204ENSMUST00000168878 3110070M22RikQ9DAQ7 118 aa12.03□□□□□ -0.48
Shroom3-204ENSMUST00000168878 C130032M10RikQ8C888 123 aa12.03□□□□□ -0.48
Shroom3-204ENSMUST00000168878 SnurfQ9WU12 71 aa12.02□□□□□ -0.49
Shroom3-204ENSMUST00000168878 Ighv1-56A0A0A6YXG2 117 aa12.01□□□□□ -0.49
Shroom3-204ENSMUST00000168878 Ntn5Q3UQ22 452 aa12.01□□□□□ -0.49
Shroom3-204ENSMUST00000168878 Ighv2-9A0A075B5Q5 116 aa12.01□□□□□ -0.49
Shroom3-204ENSMUST00000168878 Defb45Q3V490 66 aa12.01□□□□□ -0.49
Shroom3-204ENSMUST00000168878 Defb38Q7TNV7 63 aa12.01□□□□□ -0.49
Shroom3-204ENSMUST00000168878 Rif1Q6PR54 2419 aaKnown RBP12□□□□□ -0.49
Shroom3-204ENSMUST00000168878 Znf580Q9DB38 172 aa11.98□□□□□ -0.49
Shroom3-204ENSMUST00000168878 Col27a1Q5QNQ9 1845 aa11.94□□□□□ -0.5
Shroom3-204ENSMUST00000168878 Gm16485Q8C4B7 115 aa11.94□□□□□ -0.5
Shroom3-204ENSMUST00000168878 Ankhd1E9PUR0 2548 aaKnown RBP11.94□□□□□ -0.5
Shroom3-204ENSMUST00000168878 Igkv3-7A0A0G2JE31 119 aa11.93□□□□□ -0.5
Shroom3-204ENSMUST00000168878 Gm9887F6RFI0 207 aa11.93□□□□□ -0.5
Shroom3-204ENSMUST00000168878 Tln1P26039 2541 aaKnown RBP11.93□□□□□ -0.5
Shroom3-204ENSMUST00000168878 Gm10570F6VB42 170 aa11.93□□□□□ -0.5
Shroom3-204ENSMUST00000168878 Igkv8-28A0A0G2JE47 121 aa11.92□□□□□ -0.5
Shroom3-204ENSMUST00000168878 Apoc4Q61268 124 aa11.92□□□□□ -0.5
Shroom3-204ENSMUST00000168878 Q9DAA7 145 aa11.92□□□□□ -0.5
Shroom3-204ENSMUST00000168878 Bri3P28662 125 aa11.92□□□□□ -0.5
Shroom3-204ENSMUST00000168878 4930518I15RikQ3V2W7 57 aa11.91□□□□□ -0.5
Shroom3-204ENSMUST00000168878 Gm43218A0A0G2JGT0 114 aa11.91□□□□□ -0.5
Shroom3-204ENSMUST00000168878 Gm10300Q8C8P7 189 aa11.91□□□□□ -0.5
Shroom3-204ENSMUST00000168878 Coa6Q8BGD8 79 aa11.91□□□□□ -0.5
Shroom3-204ENSMUST00000168878 Cd164Q9R0L9 197 aa11.9□□□□□ -0.5
Shroom3-204ENSMUST00000168878 Abca2P41234 2434 aa11.9□□□□□ -0.5
Shroom3-204ENSMUST00000168878 Wfdc6bF6ULY1 148 aa11.9□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 51.2 ms